keyword
https://read.qxmd.com/read/38652190/an-efficient-vector-based-crispr-cas9-system-in-zebrafish-cell-line
#1
JOURNAL ARTICLE
Xiaokang Ye, Jiali Lin, Qiuji Chen, Jiehuan Lv, Chunsheng Liu, Yuping Wang, Shuqi Wang, Xiaobo Wen, Fan Lin
The clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9 (CRISPR/Cas9) system has been widely applied in animals as an efficient genome editing tool. However, the technique is difficult to implement in fish cell lines partially due to the lack of efficient promoters to drive the expression of both sgRNA and the Cas9 protein within a single vector. In this study, it was indicated that the zebrafish U6 RNA polymerase III (ZFU6) promoter could efficiently induce tyrosinase (tyr) gene editing and lead to loss of retinal pigments when co-injection with Cas9 mRNA in zebrafish embryo...
April 23, 2024: Marine Biotechnology
https://read.qxmd.com/read/38652182/microfluidics-as-an-emerging-paradigm-for-assisted-reproductive-technology-a-sperm-separation-perspective
#2
REVIEW
Mohammadjavad Bouloorchi Tabalvandani, Zahra Saeidpour, Zahra Habibi, Saeed Javadizadeh, Seyed Ahmadreza Firoozabadi, Majid Badieirostami
Millions of people are subject to infertility worldwide and one in every six people, regardless of gender, experiences infertility at some period in their life, according to the World Health Organization. Assisted reproductive technologies are defined as a set of procedures that can address the infertility issue among couples, culminating in the alleviation of the condition. However, the costly conventional procedures of assisted reproduction and the inherent vagaries of the processes involved represent a setback for its successful implementation...
April 23, 2024: Biomedical Microdevices
https://read.qxmd.com/read/38651890/genome-wide-identification-of-the-hsp70-gene-family-in-penaeus-chinensis-and-their-response-to-environmental-stress
#3
JOURNAL ARTICLE
Xinran Li, Miao Zhu
The heat shock protein 70 (HSP70) gene family plays a crucial role in the response of organisms to environmental stress. However, it has not been systematically characterized in shrimp. In this study, we identified 25 PcHsp70 genes in the Penaeus chinensis genome. The encoded proteins were categorized into six subgroups based on phylogenetic relationships. Tandem duplication was the main driver of amplification in the PcHsp70 family, and the genes have experienced strong purifying selection during evolution...
April 23, 2024: Animal Biotechnology
https://read.qxmd.com/read/38651213/drug-testing-of-monodisperse-arrays-of-live-microdissected-tumors-using-a-valved-multiwell-microfluidic-platform
#4
JOURNAL ARTICLE
Ethan J Lockhart, Lisa F Horowitz, Adán Rodríguez, Songli Zhu, Tran Nguyen, Mehdi Mehrabi, Taranjit S Gujral, Albert Folch
Cancer drug testing in animals is an extremely poor predictor of the drug's safety and efficacy observed in humans. Hence there is a pressing need for functional testing platforms that better predict traditional and immunotherapy responses in human, live tumor tissue or tissue constructs, and at the same time are compatible with the use of mouse tumor tissue to facilitate building more accurate disease models. Since many cancer drug actions rely on mechanisms that depend on the tumor microenvironment (TME), such platforms should also retain as much of the native TME as possible...
April 23, 2024: Lab on a Chip
https://read.qxmd.com/read/38650751/contribution-of-the-elrs-to-the-development-of-advanced-in-vitro-models
#5
REVIEW
María Puertas-Bartolomé, Desiré Venegas-Bustos, Sergio Acosta, José Carlos Rodríguez-Cabello
Developing in vitro models that accurately mimic the microenvironment of biological structures or processes holds substantial promise for gaining insights into specific biological functions. In the field of tissue engineering and regenerative medicine, in vitro models able to capture the precise structural, topographical, and functional complexity of living tissues, prove to be valuable tools for comprehending disease mechanisms, assessing drug responses, and serving as alternatives or complements to animal testing...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38647993/wheat-flour-derived-amyloid-fibrils-for-efficient-removal-of-organic-dyes-from-contaminated-water
#6
JOURNAL ARTICLE
Dan-Dan Yang, Fu-Xiang Chang, Bo-Fan Zhang, Yang-Chun Yong
Amyloid fibrils derived from different proteins have been proved as a promising material for adsorption of various pollutants from wastewater, which showed advantages of low cost and eco-friendliness. However, most of the amyloid fibrils derived from animal-based proteins with high environmental footprint, while more sustainable amyloid fibrils derived from plant materials are desirable. In this study, a plant-derived amyloid fibril was extracted from the commonly used wheat flour with a simple and scalable protein purification and fibrillization process...
February 14, 2024: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647941/collagen-type-ii-solution-extracted-from-supercritical-carbon-dioxide-decellularized-porcine-cartilage-regenerative-efficacy-on-post-traumatic-osteoarthritis-model
#7
JOURNAL ARTICLE
Srinivasan Periasamy, Yun-Ju Chen, Dur-Zong Hsu, Dar-Jen Hsieh
Osteoarthritis (OA) of the knee is a common degenerative articular disorder and is one of the main causes of pain and functional disability. Cartilage damage is frequently linked to elevated osteoarthritis incidence. Supercritical carbon dioxide (scCO2 ) decellularized cartilage graft produced from the porcine cartilage is an ideal candidate for cartilage tissue engineering. In the present study, we derived collagen type II (Col II) solution from the scCO2 decellularized porcine cartilage graft (dPCG) and compared its efficacy with hyaluronic acid (HA) in the surgical medial meniscectomy (MNX) induced post-traumatic osteoarthritis (PTOA) model...
February 3, 2024: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647930/enhancing-the-endo-activity-of-the-thermophilic-chitinase-to-yield-chitooligosaccharides-with-high-degrees-of-polymerization
#8
JOURNAL ARTICLE
Feifei Guan, Xiaoqian Tian, Ruohan Zhang, Yan Zhang, Ningfeng Wu, Jilu Sun, Honglian Zhang, Tao Tu, Huiying Luo, Bin Yao, Jian Tian, Huoqing Huang
Thermophilic endo-chitinases are essential for production of highly polymerized chitooligosaccharides, which are advantageous for plant immunity, animal nutrition and health. However, thermophilic endo-chitinases are scarce and the transformation from exo- to endo-activity of chitinases is still a challenging problem. In this study, to enhance the endo-activity of the thermophilic chitinase Chi304, we proposed two approaches for rational design based on comprehensive structural and evolutionary analyses. Four effective single-point mutants were identified among 28 designed mutations...
March 7, 2024: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647807/effects-of-ottonia-anisum-plant-extract-on-local-anesthetic-analgesic-anti-inflammatory-and-hcl%C3%A2-induced-acute-lung-injury-activities-a-study-in-animal-models
#9
JOURNAL ARTICLE
Mingming Liu, Hui Wang, Qiang Yue, Junli Liu
Ottonia anisum (O. anisum), belonging to the family Piperaceae, is renowned for its medicinal properties. The plant is rich in alkaloids, terpenoids and flavonoids with recorded bioactivities. The stems, roots, and leaves, of the O. anisum have been extensively used in the folk medicine. Therefore, the present study was conducted to examine the pharmacological activities of O. anisum root extract. Methanolic root extract of O. anisum was assessed for local anesthetic, analgesic, anti-inflammatory and HCl-induced acute lung injury activities in animal models...
November 30, 2023: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647595/optimization-of-clostridium-beijerinckii-semi-solid-fermentation-of-rape-straw-to-produce-butyric-acid-by-genome-analysis
#10
JOURNAL ARTICLE
Hui Kou, Jia Zheng, Guangbin Ye, Zongwei Qiao, Kaizheng Zhang, Huibo Luo, Wei Zou
Butyric acid is a volatile saturated monocarboxylic acid, which is widely used in the chemical, food, pharmaceutical, energy, and animal feed industries. This study focuses on producing butyric acid from pre-treated rape straw using simultaneous enzymatic hydrolysis semi-solid fermentation (SEHSF). Clostridium beijerinckii BRM001 screened from pit mud of Chinese nongxiangxing baijiu was used. The genome of C. beijerinckii BRM001 was sequenced and annotated. Using rape straw as the sole carbon source, fermentation optimization was carried out based on the genomic analysis of BRM001...
February 14, 2024: Bioresources and Bioprocessing
https://read.qxmd.com/read/38646468/in-silico-assessment-of-nanoparticle-toxicity-powered-by-the-enalos-cloud-platform-integrating-automated-machine-learning-and-synthetic-data-for-enhanced-nanosafety-evaluation
#11
JOURNAL ARTICLE
Dimitra-Danai Varsou, Panagiotis D Kolokathis, Maria Antoniou, Nikolaos K Sidiropoulos, Andreas Tsoumanis, Anastasios G Papadiamantis, Georgia Melagraki, Iseult Lynch, Antreas Afantitis
The rapid advance of nanotechnology has led to the development and widespread application of nanomaterials, raising concerns regarding their potential adverse effects on human health and the environment. Traditional (experimental) methods for assessing the nanoparticles (NPs) safety are time-consuming, expensive, and resource-intensive, and raise ethical concerns due to their reliance on animals. To address these challenges, we propose an in silico workflow that serves as an alternative or complementary approach to conventional hazard and risk assessment strategies, which incorporates state-of-the-art computational methodologies...
December 2024: Computational and Structural Biotechnology Journal
https://read.qxmd.com/read/38646013/effects-of-electro-mechanical-uncouplers-hormonal-stimulation-and-pacing-rate-on-the-stability-and-function-of-cultured-rabbit-myocardial-slices
#12
JOURNAL ARTICLE
V Baron, S T Sommer, D J Fiegle, A-K M Pfeuffer, R Peyronnet, T Volk, T Seidel
Introduction: Recent advances have enabled organotypic culture of beating human myocardial slices that are stable for weeks. However, human myocardial samples are rare, exhibit high variability and frequently originate from diseased hearts. Thus, there is a need to adapt long-term slice culture for animal myocardium. When applied to animal cardiac slices, studies in healthy or genetically modified myocardium will be possible. We present the culture of slices from rabbit hearts, which resemble the human heart in microstructure, electrophysiology and excitation-contraction coupling...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38638325/applying-knowledge-and-experience-from-potato-solanum-tuberosum-to-update-genetic-stability-data-requirements-in-the-risk-assessment-for-vegetatively-propagated-biotech-crops
#13
JOURNAL ARTICLE
Matthew G Pence, Muffy Koch, Jaylee DeMond, Gary Rudgers
Regulatory agencies require data on genetic stability as part of the safety assessment for biotech crops, even though the genetic stability of a plant is not necessarily an environmental, human or animal health safety concern. While sexual reproduction has the potential to introduce genomic variation in conventionally bred and biotech crops, vegetative propagation is genetically stable. In vegetatively propagated crops, meiosis does not occur thus limiting the number of homologous recombination events that could lead to chromosomal rearrangements in progeny plants...
2024: Frontiers in Bioengineering and Biotechnology
https://read.qxmd.com/read/38636740/leveraging-the-biotechnological-promise-of-the-hagfish-variable-lymphocyte-receptors-tools-for-aquatic-microbial-diseases
#14
REVIEW
Dennis B Bela-Ong, Jaesung Kim, Kim D Thompson, Tae Sung Jung
The jawless vertebrates (agnathans or cyclostomes) are ancestral animals comprising lampreys and hagfishes, which are the only extant representatives. They possess an alternative adaptive immune system (AIS) that uses leucine-rich repeats (LRR)-based variable lymphocyte receptors (VLRs) instead of the immunoglobulin (Ig)-based antigen receptors of jawed vertebrates (gnathostomes). The five VLR types (VLRA-VLRE) are expressed on agnathan lymphocytes and functionally resemble lymphocyte antigen receptors. In particular, VLRB is functionally similar to the B cell receptor expressed and secreted by B-like lymphocytes as VLRB antibodies that bind antigens with high affinity and specificity...
April 16, 2024: Fish & Shellfish Immunology
https://read.qxmd.com/read/38636593/lipid-mixtures-from-a-liposome-kit-and-melatonin-improve-post-thawed-angora-goat-sperm-parameters
#15
JOURNAL ARTICLE
Mustafa Numan Bucak, Ömer Faruk Karaşör, Ayşe Sarı, Mustafa Bodu, Pinar Ili, Salih Narlıçay, Mehmet Bozkurt Ataman, Fikret Sari
Semen freezing and storing has been widely used in reproductive biotechnology, being applied to certain males of livestock breeds or animal species with economic value such as the Angora goat. The development of a semen extender with the cryoprotective agents can prevent the deterioration of sperm parameters after thawing. This study aimed to investigate lipid mixtures (from a liposome kit, Lps) and melatonin (Mel) at different doses to prevent the deterioration of sperm parameters and to provide the cryoprotective effects on sperm DNA...
April 16, 2024: Cryobiology
https://read.qxmd.com/read/38635138/the-%C3%AE-subunit-of-amp-activated-protein-kinase-is-critical-for-the-metabolic-success-and-tachyzoite-proliferation-of-toxoplasma-gondii
#16
JOURNAL ARTICLE
Xuke Yang, Jichao Yang, Mengyu Lyu, Yaqiong Li, Anqi Liu, Bang Shen
Toxoplasma gondii is a zoonotic parasite infecting humans and nearly all warm-blooded animals. Successful parasitism in diverse hosts at various developmental stages requires the parasites to fine tune their metabolism according to environmental cues and the parasite's needs. By manipulating the β and γ subunits, we have previously shown that AMP-activated protein kinase (AMPK) has critical roles in regulating the metabolic and developmental programmes. However, the biological functions of the α catalytic subunit have not been established...
April 2024: Microbial Biotechnology
https://read.qxmd.com/read/38634284/transcriptomic-analysis-reveals-the-inhibitory-effect-of-beta-sitosterol-on-proliferation-of-bovine-preadipocytes
#17
JOURNAL ARTICLE
Lei Jiang, Yuan Wan, Jinhai Pan, Xiaoyu Mao, Xiaolei Sun, Linsen Zan, Hongbao Wang
Fat deposition affects beef quantity and quality via preadipocyte proliferation. Beta-sitosterol, a natural small molecular compound, has various functions, such as anti-inflammation, antibacterial, and anticancer properties. The mechanism of action of Beta-sitosterol on bovine preadipocytes remains unclear. This study, based on RNA-seq, reveals the impact of Beta -sitosterol on the proliferation of bovine preadipocytes. Compared to the control group, Beta-sitosterol demonstrated a more pronounced inhibitory effect on cell proliferation after 48 hours of treatment than after 24 hours, as evidenced by the results of EdU staining and flow cytometry...
April 18, 2024: Animal Biotechnology
https://read.qxmd.com/read/38632585/swim-bladder-derived-biomaterials-structures-compositions-properties-modifications-and-biomedical-applications
#18
REVIEW
Xiaorong Lan, Mingdong Luo, Meiling Li, Linpeng Mu, Guangwen Li, Gong Chen, Zhoukun He, Jingang Xiao
Animal-derived biomaterials have been extensively employed in clinical practice owing to their compositional and structural similarities with those of human tissues and organs, exhibiting good mechanical properties and biocompatibility, and extensive sources. However, there is an associated risk of infection with pathogenic microorganisms after the implantation of tissues from pigs, cattle, and other mammals in humans. Therefore, researchers have begun to explore the development of non-mammalian regenerative biomaterials...
April 17, 2024: Journal of Nanobiotechnology
https://read.qxmd.com/read/38628493/gene-editing-in-small-and-large-animals-for-translational-medicine-a-review
#19
REVIEW
Clésio Gomes Mariano, Vanessa Cristina de Oliveira, Carlos Eduardo Ambrósio
The CRISPR/Cas9 system is a simpler and more versatile method compared to other engineered nucleases such as Zinc Finger Nucleases (ZFNs) and Transcription Activator-Like Effector Nucleases (TALENs), and since its discovery, the efficiency of CRISPR-based genome editing has increased to the point that multiple and different types of edits can be made simultaneously. These advances in gene editing have revolutionized biotechnology by enabling precise genome editing with greater simplicity and efficacy than ever before...
2024: Animal Reproduction
https://read.qxmd.com/read/38625094/study-on-the-hemodynamic-effects-of-different-pulsatile-working-modes-of-a-rotary-blood-pump-using-a-microfluidic-platform-that-realizes-in-vitro-cell-culture-effectively
#20
JOURNAL ARTICLE
Lixue Liang, Xueying Wang, Dong Chen, Palaniappan Sethu, Guruprasad A Giridharan, Yanxia Wang, Yu Wang, Kai-Rong Qin
Rotary blood pumps (RBPs) operating at a constant speed generate non-physiologic blood pressure and flow rate, which can cause endothelial dysfunction, leading to adverse clinical events in peripheral blood vessels and other organs. Notably, pulsatile working modes of the RBP can increase vascular pulsatility to improve arterial endothelial function. However, the laws and related mechanisms of differentially regulating arterial endothelial function under different pulsatile working modes are still unclear. This knowledge gap hinders the optimal selection of the RBP working modes...
April 16, 2024: Lab on a Chip
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