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Coat Protein Complex 1

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https://www.readbyqxmd.com/read/30469121/a-high-resolution-study-of-in-situ-surface-enhanced-raman-scattering-nanotag-behavior-in-biological-systems
#1
Jing Wang, Will Anderson, Junrong Li, Lynlee L Lin, Yuling Wang, Matt Trau
The colloidal stability of surface-enhanced Raman scattering (SERS) nanotags (Raman reporter-conjugated plasmonic nanoparticles) significantly affects the accuracy and reproducibility of SERS measurements, particularly in biological systems. Limited understanding of SERS nanotag stability may partly hamper the translation of SERS nanotags from the laboratory to their use in the clinic. In this contribution, we utilized differential centrifugal sedimentation (DCS), a reliable and straightforward technique to comprehensively analyze the colloidal stability of SERS nanotags in biological systems...
November 12, 2018: Journal of Colloid and Interface Science
https://www.readbyqxmd.com/read/30448513/accumulation-of-ptdins-4-p-at-the-golgi-mediated-by-reversible-oxidation-of-the-ptdins-4-p-phosphatase-sac1-by-h-2-o-2
#2
Jung Mi Lim, Sujin Park, Mi-Sook Lee, Tamas Balla, Dongmin Kang, Sue Goo Rhee
Phosphatidylinositol 4-phosphate [PtdIns(4)P] plays a key role in the biogenesis of transport vesicles at the Golgi complex by recruiting coat proteins and their accessory factors. The PtdIns(4)P content of the Golgi is determined by the concerted action of PtdIns 4-kinase (PI4K) and PtdIns(4)P phosphatase enzymes. Sac1 (suppressor of actin 1) is the major PtdIns(4)P phosphatase and is localized to the Golgi and endoplasmic reticulum. The targeting of both PI4Ks and Sac1 to the Golgi membrane is extensively regulated, as is the catalytic activity of PI4Ks at the Golgi...
November 16, 2018: Free Radical Biology & Medicine
https://www.readbyqxmd.com/read/30429341/recessive-host-range-mutants-and-unsusceptible-cells-that-inactivate-virions-without-genome-penetration-ecological-and-technical-implications
#3
Aaron P Roznowski, Robert J Young, Samuel D Love, Avenetti A Andromita, Vanessa A Guzman, Margaret H Wilch, Ava Block, Anne McGill, Martine Lavelle, Anastasia Romanova, Aimi Sekiguchi, Meixiao Wang, April D Burch, Bentley A Fane
Although microviruses do not possess a visible tail structure, one vertex rearranges after interacting with host lipopolysaccharides. Most examinations of host range, eclipse, and penetration were conducted before this "host-induced" unique vertex was discovered and before DNA sequencing became routine. Consequently, structure-function relationships dictating host range remain undefined. Biochemical and genetic analyses were conducted with two closely related microviruses, α3 and ST-1. Despite ∼90% amino acid identity, the natural host of α3 is E...
November 14, 2018: Journal of Virology
https://www.readbyqxmd.com/read/30387991/recombinant-fluorescent-peptidomimetic-tracer-for-immunodetection-of-imidaclothiz
#4
Yuan Ding, Xiude Hua, Mei Du, Qian Yang, Lina Hou, Limin Wang, Fengquan Liu, Gualberto Gonzalez-Sapienza, Minghua Wang
Peptidomimetic and anti-immunocomplex peptides, which can be readily isolated from a phage-display library, have shown great potential for small-molecule immunoassay development because they typically improve the sensitivity and avoid the use of chemical haptens as coatings or tracer antigens. However, phage-borne peptides are unconventional immunoassay reagents, which greatly limits their use in commercial applications, and require secondary reagents for detection. In order to overcome these limitations, we used C2-15, a peptidomimetic of imidaclothiz, as a model peptide fused to emerald-green fluorescent protein (EmGFP) at the N-terminus (C2-15-EmGFP) and C-terminus (EmGFP-C2-15) to generate novel fluorescent-peptide tracers...
November 13, 2018: Analytical Chemistry
https://www.readbyqxmd.com/read/30349923/oleogel-structured-composite-for-the-stabilization-of-%C3%AF-3-fatty-acids-in-fish-oil
#5
Michelle C Lee, Xiaofei Jiang, J Thomas Brenna, Alireza Abbaspourrad
This study examined the encapsulation and stabilization of É·3 in fish oil into a multi-compartment system consisting of β-cyclodextrins (β-CD) complexation within an oleogel structure, which was further coated with a layer of whey protein isolate (WPI). The formation of β-CD-fish oil complex was confirmed by thermogravimetric analysis and Fourier-transform infrared spectroscopy. Particle size and ζ-potential of the oleogel-based oil-in-water emulsion did not change significantly over a 28-day storage period under different pH conditions (pH 3...
November 14, 2018: Food & Function
https://www.readbyqxmd.com/read/30324093/epithelial-cells-expressing-ehadh-an-entamoeba-histolytica-adhesin-exhibit-increased-tight-junction-proteins
#6
Abigail Betanzos, Dxinegueela Zanatta, Cecilia Bañuelos, Elizabeth Hernández-Nava, Patricia Cuellar, Esther Orozco
In Entamoeba histolytica , the EhADH adhesin together with the EhCP112 cysteine protease, form a 124 kDa complex named EhCPADH. This complex participates in trophozoite adherence, phagocytosis and cytolysis of target cells. EhCPADH and EhCP112 are both involved on epithelium damage, by opening tight junctions (TJ) and reaching other intercellular junctions. EhADH is a scaffold protein belonging to the ALIX family that contains a Bro1 domain, expresses at plasma membrane, endosomes and cytoplasm of trophozoites, and is also secreted to the medium...
2018: Frontiers in Cellular and Infection Microbiology
https://www.readbyqxmd.com/read/30299089/highly-active-protein-surfaces-enabled-by-plant-based-polyphenol-coatings
#7
Ana M L Sousa, Tai-De Li, Sabu Varghese, Peter J Halling, King Hang Aaron Lau
Proteins represent complex biomolecules capable of wide-ranging but also highly specific functionalities. Their immobilization on material supports can enable broad applications from sensing and industrial biocatalysis to biomedical interfaces and materials. We demonstrate the advantages of using aqueous-processed cross-linked polyphenol coatings for immobilizing proteins, including IgG, avidin, and various single and multidomain enzymes on diverse materials, to enable active biofunctional structures (e.g., ca...
October 30, 2018: ACS Applied Materials & Interfaces
https://www.readbyqxmd.com/read/30267611/new-micro-amount-of-virion-enrichment-technique-mivet-to-detect-influenza-a-virus-in-the-duck-faeces
#8
Wataru Yamazaki, Ryohei Makino, Konomu Nagao, Hirohisa Mekata, Kenji Tsukamoto
Transboundary animal diseases, including highly pathogenic avian influenza, cause vast economic losses throughout the world. While it is important to identify the sources and propagation routes of the spread, such strategies are often hindered by incomplete epidemiological evidence. Isolation/detection of micro-amounts of pathogens from environmental samples is rarely successful due to the very low contamination level. This paper describes the development of the micro-amount of virion enrichment technique (MiVET), a simple and highly sensitive method that combines the use of a complex comprising a polyclonal antibody and protein G-coated magnetic beads for virion capture, and simple sodium dodecyl benzenesulfonate (SDBS) elution for low volume samples...
September 29, 2018: Transboundary and Emerging Diseases
https://www.readbyqxmd.com/read/30231888/kinetics-of-mrna-delivery-and-protein-translation-in-dendritic-cells-using-lipid-coated-plga-nanoparticles
#9
Hanzey Yasar, Alexander Biehl, Chiara De Rossi, Marcus Koch, Xabi Murgia, Brigitta Loretz, Claus-Michael Lehr
BACKGROUND: Messenger RNA (mRNA) has gained remarkable attention as an alternative to DNA-based therapies in biomedical research. A variety of biodegradable nanoparticles (NPs) has been developed including lipid-based and polymer-based systems for mRNA delivery. However, both systems still lack in achieving an efficient transfection rate and a detailed understanding of the mRNA transgene expression kinetics. Therefore, quantitative analysis of the time-dependent translation behavior would provide a better understanding of mRNA's transient nature and further aid the enhancement of appropriate carriers with the perspective to generate future precision nanomedicines with quick response to treat various diseases...
September 19, 2018: Journal of Nanobiotechnology
https://www.readbyqxmd.com/read/30190322/crispr-delivery-particles-targeting-nuclear-receptor-interacting-protein-1-nrip1-in-adipose-cells-to-enhance-energy-expenditure
#10
Yuefei Shen, Jessica L Cohen, Sarah M Nicoloro, Mark Kelly, Batuhan Yenilmez, Felipe Henriques, Emmanouela Tsagkaraki, Yvonne J K Edwards, Xiaodi Hu, Randall H Friedline, Jason K Kim, Michael P Czech
RNA-guided, engineered nucleases derived from the prokaryotic adaptive immune system CRISPR-Cas represent a powerful platform for gene deletion and editing. When used as a therapeutic approach, direct delivery of Cas9 protein and single-guide RNA (sgRNA) could circumvent the safety issues associated with plasmid delivery and therefore represents an attractive tool for precision genome engineering. Gene deletion or editing in adipose tissue to enhance its energy expenditure, fatty acid oxidation, and secretion of bioactive factors through a "browning" process presents a potential therapeutic strategy to alleviate metabolic disease...
November 2, 2018: Journal of Biological Chemistry
https://www.readbyqxmd.com/read/30182296/impedimetric-immunosensor-for-dengue-diagnosis-using-graphite-screen-printed-electrodes-coated-with-poly-4-aminophenylacetic-acid
#11
Thiago Coimbra Pimenta, Cátia da Cruz Santos, Ronaldo Luís Thomasini, Lucas Franco Ferreira
Dengue is an infectious viral disease transmitted by the Aedes aegypti mosquito, the control of which is complex. In addition, the clinical diagnosis is difficult to perform since it resembles other febrile infections; thus, the development of more effective methods to detect dengue virus (DV) has drawn increasing attention. The present study aimed to develop an impedimetric immunosensor for dengue diagnosis using a screen-printed electrode (SPE) functionalized with polymer films derived from 4-aminophenylacetic acid (4-APA)...
September 4, 2018: Biomedical Microdevices
https://www.readbyqxmd.com/read/30160359/the-caveolae-associated-coiled-coil-protein-necc2-regulates-insulin-signalling-in-adipocytes
#12
Andrés Trávez, Yoana Rabanal-Ruiz, Jaime López-Alcalá, Laura Molero-Murillo, Alberto Díaz-Ruiz, Rocío Guzmán-Ruiz, Victoria Catalán, Amaia Rodríguez, Gema Frühbeck, Francisco J Tinahones, Stéphane Gasman, Nicolas Vitale, Yolanda Jiménez-Gómez, María M Malagón
Adipocyte dysfunction in obesity is commonly associated with impaired insulin signalling in adipocytes and insulin resistance. Insulin signalling has been associated with caveolae, which are coated by large complexes of caveolin and cavin proteins, along with proteins with membrane-binding and remodelling properties. Here, we analysed the regulation and function of a component of caveolae involved in growth factor signalling in neuroendocrine cells, neuroendocrine long coiled-coil protein-2 (NECC2), in adipocytes...
November 2018: Journal of Cellular and Molecular Medicine
https://www.readbyqxmd.com/read/30120927/cbd-1-organizes-two-independent-complexes-required-for-eggshell-vitelline-layer-formation-and-egg-activation-in-c-elegans
#13
Delfina P González, Helen V Lamb, Diana Partida, Zachary T Wilson, Marie-Claire Harrison, Julián A Prieto, James J Moresco, Jolene K Diedrich, John R Yates, Sara K Olson
Metazoan eggs have a specialized coat of extracellular matrix that aids in sperm-egg recognition. The coat is rapidly remodeled after fertilization to prevent polyspermy and establish a more permanent barrier to protect the developing embryo. In nematodes, this coat is called the vitelline layer, which is remodeled into the outermost layer of a rigid and impermeable eggshell. We have identified three key components of the vitelline layer structural scaffold - PERM-2, PERM-4 and CBD-1, the first such proteins to be described in the nematode C...
October 15, 2018: Developmental Biology
https://www.readbyqxmd.com/read/30115966/retrograde-transport-by-clathrin-coated-vesicles-is-involved-in-intracellular-transport-of-prp-sc-in-persistently-prion-infected-cells
#14
Takeshi Yamasaki, Akio Suzuki, Rie Hasebe, Motohiro Horiuchi
Intracellular dynamics of an abnormal isoform of prion protein (PrPSc ) are tightly associated with prion propagation. However, the machineries involved in the intracellular trafficking of PrPSc are not fully understood. Our previous study suggested that PrPSc in persistently prion-infected cells dynamically circulates between endocytic-recycling compartments (ERCs) and peripheral regions of the cells. To investigate these machineries, we focused on retrograde transport from endosomes to the trans-Golgi network, which is one of the pathways involved in recycling of molecules...
August 16, 2018: Scientific Reports
https://www.readbyqxmd.com/read/30099531/the-ap-1-complex-is-required-for-proper-mucilage-formation-in-arabidopsis-seeds
#15
Tomoo Shimada, Tadashi Kunieda, Sakura Sumi, Yasuko Koumoto, Kentaro Tamura, Kyoko Hatano, Haruko Ueda, Ikuko Hara-Nishimura
The adaptor protein (AP) complexes play crucial roles in vesicle formation in post-Golgi trafficking. Land plants have five types of AP complexes (AP-1 to AP-5), each of which consists of two large subunits, one medium subunit and one small subunit. Here, we show that the Arabidopsis AP-1 complex mediates the polarized secretion and accumulation of a pectic polysaccharide called mucilage in seed coat cells. Previously, a loss-of-function mutant of AP1M2, the medium subunit of AP-1, has been shown to display deleterious growth defects because of defective cytokinesis...
November 1, 2018: Plant & Cell Physiology
https://www.readbyqxmd.com/read/30090807/ion-exchange-chromatography-coupled-with-dynamic-coating-capillary-electrophoresis-for-simultaneous-determination-of-tropomyosin-and-arginine-kinase-in-shellfish
#16
Linglin Fu, Jinru Zhou, Chong Wang, Xiaohui Li, Lei Zheng, Yanbo Wang
Tropomyosin (TM) and arginine kinase (AK) are known as two major allergens in seafood. For the first time, we demonstrate a newly developed ion-exchange chromatography coupled with dynamic coating capillary electrophoresis (IEC-DCCE) method to simultaneously analyze the TM and AK in shellfish. First, we have optimized the procedure of IEC for simple enrichment of TM and AK crude extract. By using 30 mM borate-borax at pH 9.0 with 0.3% (v/v) Tween-20 as a dynamic coating modifier for capillary electrophoresis (CE) separation, the migration time, separation efficiency and electrophoretic resolution greatly improved...
2018: Frontiers in Chemistry
https://www.readbyqxmd.com/read/30021001/phylogenetic-analysis-of-viruses-in-tuscan-vitis-vinifera-sylvestris-gmeli-hegi
#17
Erika Sabella, Roberto Pierro, Andrea Luvisi, Alessandra Panattoni, Claudio D'Onofrio, Giancarlo Scalabrelli, Eliana Nutricati, Alessio Aprile, Luigi De Bellis, Alberto Materazzi
The health status of the native grapevine Vitis vinifera subsp. sylvestris (Gmeli) Hegi in natural areas in Europe has received little attention. A survey was carried out on wild grapevines in Tuscany (Italy), where isolates of the Grapevine rupestris stem pitting virus (GRSPaV), Grapevine leafroll-associated virus 1 and 3 (GLRaV-1 and GLRaV-3) and Grapevine virus A (GVA) were detected. The complete coat protein (CP) region of these isolates was sequenced to investigate the relationship of the viral variants from Tuscan wild grapevines with isolates from different geographical origins...
2018: PloS One
https://www.readbyqxmd.com/read/30013589/differential-shape-of-geminivirus-mutant-spectra-across-cultivated-and-wild-hosts-with-invariant-viral-consensus-sequences
#18
Sonia Sánchez-Campos, Guillermo Domínguez-Huerta, Luis Díaz-Martínez, Diego M Tomás, Jesús Navas-Castillo, Enrique Moriones, Ana Grande-Pérez
Geminiviruses (family Geminiviridae ) possess single-stranded circular DNA genomes that are replicated by cellular polymerases in plant host cell nuclei. In their hosts, geminivirus populations behave as ensembles of mutant and recombinant genomes, known as viral quasispecies. This favors the emergence of new geminiviruses with altered host range, facilitating new or more severe diseases or overcoming resistance traits. In warm and temperate areas several whitefly-transmitted geminiviruses of the genus Begomovirus cause the tomato yellow leaf curl disease (TYLCD) with significant economic consequences...
2018: Frontiers in Plant Science
https://www.readbyqxmd.com/read/30013119/complex-silica-composite-nanomaterials-templated-with-dna-origami
#19
Xiaoguo Liu, Fei Zhang, Xinxin Jing, Muchen Pan, Pi Liu, Wei Li, Bowen Zhu, Jiang Li, Hong Chen, Lihua Wang, Jianping Lin, Yan Liu, Dongyuan Zhao, Hao Yan, Chunhai Fan
Genetically encoded protein scaffolds often serve as templates for the mineralization of biocomposite materials with complex yet highly controlled structural features that span from nanometres to the macroscopic scale1-4 . Methods developed to mimic these fabrication capabilities can produce synthetic materials with well defined micro- and macro-sized features, but extending control to the nanoscale remains challenging5,6 . DNA nanotechnology can deliver a wide range of customized nanoscale two- and three-dimensional assemblies with controlled sizes and shapes7-11 ...
July 2018: Nature
https://www.readbyqxmd.com/read/29985341/biotin-based-pulldown-assay-to-validate-mrna-targets-of-cellular-mirnas
#20
Sabyasachi Dash, Muthukumar Balasubramaniam, Chandravanu Dash, Jui Pandhare
MicroRNAs (miRNAs) are a class of small noncoding RNAs that post-transcriptionally regulate cellular gene expression. MiRNAs bind to the 3' untranslated region (UTR) of target mRNA to inhibit protein translation or in some instances cause mRNA degradation. The binding of the miRNA to the 3' UTR of the target mRNA is mediated by a 2-8 nucleotide seed sequence at the 5' end of miRNA. While the role of miRNAs as cellular regulatory molecules is well established, identification of the target mRNAs with functional relevance remains a challenge...
June 12, 2018: Journal of Visualized Experiments: JoVE
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