keyword
https://read.qxmd.com/read/38634809/detspace-a-web-server-for-engineering-detectable-pathways-for-bio-based-chemical-production
#1
JOURNAL ARTICLE
Hèctor Martín Lázaro, Ricardo Marín Bautista, Pablo Carbonell
Tackling climate change challenges requires replacing current chemical industrial processes through the rational and sustainable use of biodiversity resources. To that end, production routes to key bio-based chemicals for the bioeconomy have been identified. However, their production still remains inefficient in terms of titers, rates, and yields; because of the hurdles found when scaling up. In order to make production more efficient, strategies like automated screening and dynamic pathway regulation through biosensors have been applied as part of strain optimization...
April 18, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38633588/napyradiomycin-b4-suppresses-rankl-induced-osteoclastogenesis-and-prevents-alveolar-bone-destruction-in-experimental-periodontitis
#2
JOURNAL ARTICLE
Ju Ang Kim, Soomin Lim, Geum Jin Kim, Velina Silviani, Jung-Eun Kim, Jong-Sup Bae, Joo-Won Nam, Hyukjae Choi, Eui Kyun Park
The unique structure and beneficial biological properties of marine natural products have drawn interest in drug development. Here, we examined the therapeutic potential of napyradiomycin B4 isolated from marine-derived Streptomyces species for osteoclast-related skeletal diseases. Bone marrow-derived macrophages were treated with napyradiomycin B4 in an osteoclast-inducing medium, and osteoclast formation, osteoclast-specific gene expression, and nuclear factor of activated T-cells cytoplasmic 1 (NFATc1) localization were evaluated using tartrate-resistant acid phosphatase staining, real-time PCR, and immunostaining, respectively...
April 12, 2024: ACS Pharmacology & Translational Science
https://read.qxmd.com/read/38633586/santacruzamate-a-alleviates-pain-and-pain-related-adverse-emotions-through-the-inhibition-of-microglial-activation-in-the-anterior-cingulate-cortex
#3
JOURNAL ARTICLE
Yan Qin, Qingqing Liu, Saiying Wang, Qinhui Wang, Yaya Du, Jingyue Yao, Yue Chen, Qi Yang, Yumei Wu, Shuibing Liu, Minggao Zhao, Gaofei Wei, Le Yang
Chronic pain is a complex disease. It seriously affects patients' quality of life and imposes a significant economic burden on society. Santacruzamate A (SCA) is a natural product isolated from marine cyanobacteria in Panama. In this study, we first demonstrated that SCA could alleviate chronic inflammatory pain, pain-related anxiety, and depression emotions induced by complete Freund's adjuvant in mice while inhibiting microglial activation in the anterior cingulate cortex. Moreover, SCA treatment attenuated lipopolysaccharide (LPS)-induced inflammatory response by downregulating interleukin 1β and 6 (IL-1β and IL-6) and tumor necrosis factor-α (TNF-α) levels in BV2 cells...
April 12, 2024: ACS Pharmacology & Translational Science
https://read.qxmd.com/read/38629875/employment-of-mastoparan-like-peptides-to-prevent-staphylococcus-aureus-associated-with-bovine-mastitis
#4
JOURNAL ARTICLE
Raquel M Q Orozco, Karen G N Oshiro, Ingrid B Pinto, Danieli F Buccini, Claudiane V Almeida, Valentina Nieto Marin, Camila Maurmann de Souza, Maria L R Macedo, Marlon H Cardoso, Octávio L Franco
Bovine mastitis is a frequent infection in lactating cattle, causing great economic losses. Staphylococcus aureus represents the main etiological agent, which causes recurrent and persistent intramammary infections because conventional antibiotics are ineffective against it. Mastoparan-like peptides are multifunctional molecules with broad antimicrobial potential, constituting an attractive alternative. Nevertheless, their toxicity to host cells has hindered their therapeutic application. Previously, our group engineered three mastoparan-L analogs, namely mastoparan-MO, mastoparan-R1, and [I5 , R8 ] MP, to improve cell selectivity and potential...
April 17, 2024: Journal of Bacteriology
https://read.qxmd.com/read/38628065/further-polycyclic-quinones-of-micromonospora-sp
#5
JOURNAL ARTICLE
Otilia Deusdenia Loiola Pessoa, Hozana Patricia Silva de Freitas Cesário, Francisco das Chagas Lima Pinto, Kirley Marques Canuto, Ediberto Rocha Silveira, Diego Veras Wilke, Elthon Gois Ferreira, Aluísio Marques da Fonseca, Mayron Alves de Vasconcelos, Edson Holanda Teixeira
The crude acetone extract of a marine Micromonospora sp. strain associated with Eudistoma vannnamei was fractioned with hexane and ethyl acetate. The crude extract and both soluble fractions were assayed against several bacteria strains. The new polycyclic quinones 12-hydroxy-9-propyltetracene-6,1-dione (1), 5,12-dihydroxy-4-methoxy-9-propyltetracene-5,12-dione (2), and  4,6-dihydroxy-3-methoxycarbonyl- methyl-6a-(oxobutyl)-5,12-anthraquinone (3), along with the known 4,6-dihydroxy-3-methoxycarbonyl-methyl-6a-(oxo-3-methyl-butyl)-5,12-anthraquinone (4) and 4,6-dihydroxy-3-methoxycarbonyl-methyl-6a-(oxopentyl)-5,12-anthraquinone (5) were isolated from the hexane-soluble fraction, while from the active ethyl acetate fraction were isolated the known 4,6,11-trihydroxy-9-propyltetracene-5,12-dione (6), 4-methoxy-9-propyltetracene-6,11-dione (7), 7,8,9,10-tetrahydro-9-hydroxy-4-methoxy-9-propyltetracene-6,11-dione (8), and 10b-carbomethoxy-7,8,9,10-tetrahydro-4,6,7a,9a,11-pentahydroxy-9-propyltetracene-5,12-dione (9)...
April 16, 2024: Chemistry & Biodiversity
https://read.qxmd.com/read/38623694/risk-factors-for-suicide-reattempt-a-systematic-review-and-meta-analysis
#6
REVIEW
Andres Pemau, Carolina Marin-Martin, Marina Diaz-Marsa, Alejandro de la Torre-Luque, Wala Ayad-Ahmed, Ana Gonzalez-Pinto, Nathalia Garrido-Torres, Lucia Garrido-Sanchez, Natalia Roberto, Purificación Lopez-Peña, Lorea Mar-Barrutia, Iria Grande, Marti Guinovart, Daniel Hernandez-Calle, Luis Jimenez-Treviño, Clara Lopez-Sola, Roberto Mediavilla, Adrian Perez-Aranda, Miguel Ruiz-Veguilla, Elisa Seijo-Zazo, Alba Toll, Matilde Elices, Victor Perez-Sola, Jose Luis Ayuso-Mateos
BACKGROUND: Suicide is one of the main external causes of death worldwide. People who have already attempted suicide are at high risk of new suicidal behavior. However, there is a lack of information on the risk factors that facilitate the appearance of reattempts. The aim of this study was to calculate the risk of suicide reattempt in the presence of suicidal history and psychosocial risk factors and to estimate the effect of each individual risk factor. METHODS: This systematic review and meta-analysis were conducted following the PRISMA-2020 guidelines...
April 16, 2024: Psychological Medicine
https://read.qxmd.com/read/38621625/-use-of-anti-il-1-drugs-during-pregnancy
#7
JOURNAL ARTICLE
Valentine Faure-Bardon, Delphine Beghin, Mathilde Latour, Benedicte Coulm, Catherine Vauzelle, Elisabeth Elefant, Benoit Marin
Anti-Interleukin-1 (Anti-IL-1) drugs are used to treat some chronic rheumatic diseases that can affect young people, including women of childbearing age. Two anti-IL-1 drugs are available in France: anakinra and canakinumab. Data on their use during pregnancy are still limited. Based on the published literature, we carried out a review of the use of these anti-IL-1 therapies during pregnancy: therapeutic indications, pharmacological profiles and assessment of embryonic, fetal and neonatal risks. Based on this analysis, and given the absence of any reported concern, it is possible to consider the use of these two treatments during pregnancy if the clinical situation so requires and under certain conditions...
April 13, 2024: Gynecologie, Obstetrique, Fertilite & Senologie
https://read.qxmd.com/read/38615895/mechanistic-insights-and-emerging-therapeutic-stratagems-for-alzheimer-s-disease
#8
REVIEW
Kayalvizhi Rajendran, Uma Maheswari Krishnan
Alzheimer's disease (AD), a multi-factorial neurodegenerative disorder has affected over 30 million individuals globally and these numbers are expected to increase in the coming decades. Current therapeutic interventions are largely ineffective as they focus on a single target. Development of an effective drug therapy requires a deep understanding of the various factors influencing the onset and progression of the disease. Aging and genetic factors exert a major influence on the development of AD. Other factors like post-viral infections, iron overload, gut dysbiosis, and vascular dysfunction also exacerbate the onset and progression of AD...
April 12, 2024: Ageing Research Reviews
https://read.qxmd.com/read/38609757/-evaluation-of-the-satisfaction-of-healthcare-professionals-using-the-crat-website-and-launch-of-a-new-version
#9
JOURNAL ARTICLE
Benoît Marin, Bénédicte Coulm, Delphine Beghin, Mathilde Latour, Pascale Béloni, Jean Toniolo, Agnès Dechartres, Florence Tubach, Catherine Vauzelle, Elisabeth Elefant
In preparation for a new version of the CRAT (Centre de référence sur les agents tératogènes) website, an evaluation of user satisfaction was carried out. An invitation to complete an online questionnaire covering the various dimensions of the website (appearance, content, interactivity, ease of use, technical performance) was sent in April 2022 to healthcare professionals who referred to CRAT for clinical expertise over the previous two years. After sending out 3224 individual e-mail invitations, 758 evaluators completed the questionnaire in full (response rate: 23...
April 2, 2024: Thérapie
https://read.qxmd.com/read/38608454/organoid-models-the-future-companions-of-personalized-drug-development
#10
JOURNAL ARTICLE
Francesco Piraino, Mariana Costa, Marine Meyer, Georgina Cornish, Camilla Ceroni, Virginie Marie Victoria Mangénie Garnier, Sylke Hoehnel-Ka, Nathalie Brandenberg
High failure rates of the current drug development process are driving exemplary changes toward methodologies centered on human disease in-vitro modeling. Organoids are self-organized tissue sub-units resembling their organ of origin and are widely acknowledged for their unique potential in recapitulating human physio-pathological mechanisms. They are transformative for human health by becoming the platform of choice to probe disease mechanisms and advance new therapies. Furthermore, the compounds' validation as therapeutics represents another point of the drug development pipeline where organoids may provide key understandings and help pharma organizations replace or reduce animal research...
April 12, 2024: Biofabrication
https://read.qxmd.com/read/38608439/antidiabetic-potency-and-molecular-insights-of-natural-products-bearing-indole-moiety-a-systematic-bioinformatics-investigation-targeting-akt1
#11
JOURNAL ARTICLE
Dhananjay K Tanty, Prachi R Sahu, Ranjit Mohapatra, Susanta K Sahu
Diabetic mellitus (DM) is a chronic disorder, and type 2 DM (T2DM) is the most prevalent among all categories (nearly 90%) across the globe every year. With the availability of potential drugs, the prevalence rate has remained uncontrollable, while natural resources showed a promising potency, and exploring such potential candidates at the preclinical stage is essential. An extensive literature search selected 89 marine and plant-derived indole derivatives with anti-inflammatory, antioxidant, lipid-lowering, etc...
March 23, 2024: Computational Biology and Chemistry
https://read.qxmd.com/read/38606205/analyzing-and-engineering-of-the-biosynthetic-pathway-of-mollemycin-a-for-enhancing-its-production
#12
JOURNAL ARTICLE
Shixue Jin, Huixue Chen, Jun Zhang, Zhi Lin, Xudong Qu, Xinying Jia, Chun Lei
Mollemycin A (MOMA) is a unique glyco-hexadepsipeptide-polyketide that was isolated from a Streptomyces sp. derived from the Australian marine environment. MOMA exhibits remarkable inhibitory activity against both drug-sensitive and multidrug-resistant malaria parasites. Optimizing MOMA through structural modifications or product enhancements is necessary for the development of effective analogues. However, modifying MOMA using chemical approaches is challenging, and the production titer of MOMA in the wild-type strain is low...
September 2024: Synthetic and Systems Biotechnology
https://read.qxmd.com/read/38605737/extracellular-l-asparaginase-synthesis-bacillus-niacin-isolation-optimization-and-characterization-from-marine-saltern-sediment-sources
#13
JOURNAL ARTICLE
Mugip Rahaman Abdul Wahab, Thirunavukkarasu Palaniyandi, John Wyson, Asha Sivaji, Swarnakala Thamada
BACKGROUND: Asparagine is an amino acid that can be converted into aspartic acid and ammonia by the enzyme L-asparaginase. Some forms of cancer, such Acute Lymphoblastic Leukaemia (ALL) and Non-Hodgkin Lymphoma (NHL), respond well to this enzyme when employed as a chemotherapeutic drug. The purpose of this research was to find bacteria that can manufacture the enzymes L-asparaginasein marine slattern sediment which can be employed in commercial and industrial scale production. METHODS: All of the strains were identified as Bacillus niacini spp ...
2024: Avicenna Journal of Medical Biotechnology
https://read.qxmd.com/read/38604802/stability-based-approaches-in-chemoproteomics
#14
REVIEW
Amy L George, Maria Emilia Dueñas, José Luis Marín-Rubio, Matthias Trost
Target deconvolution can help understand how compounds exert therapeutic effects and can accelerate drug discovery by helping optimise safety and efficacy, revealing mechanisms of action, anticipate off-target effects and identifying opportunities for therapeutic expansion. Chemoproteomics, a combination of chemical biology with mass spectrometry has transformed target deconvolution. This review discusses modification-free chemoproteomic approaches that leverage the change in protein thermodynamics induced by small molecule ligand binding...
April 12, 2024: Expert Reviews in Molecular Medicine
https://read.qxmd.com/read/38602593/prokaryotic-communities-of-the-french-polynesian-sponge-dactylospongia-metachromia-display-a-site-specific-and-stable-diversity-during-an-aquaculture-trial
#15
JOURNAL ARTICLE
Mathilde Maslin, Benoît Paix, Niels van der Windt, Rohani Ambo-Rappe, Cécile Debitus, Nabila Gaertner-Mazouni, Raimana Ho, Nicole J de Voogd
Dynamics of microbiomes through time are fundamental regarding survival and resilience of their hosts when facing environmental alterations. As for marine species with commercial applications, such as marine sponges, assessing the temporal change of prokaryotic communities allows us to better consider the adaptation of sponges to aquaculture designs. The present study aims to investigate the factors shaping the microbiome of the sponge Dactylospongia metachromia, in a context of aquaculture development in French Polynesia, Rangiroa, Tuamotu archipelago...
April 11, 2024: Antonie Van Leeuwenhoek
https://read.qxmd.com/read/38597616/adherence-to-quality-indicators-for-emergency-department-treatment-of-acute-poisoning-according-to-patient-sex
#16
JOURNAL ARTICLE
Pere Llorens, Álvaro Lirón-García, Miriam Santos-Redondo, Juan Marín-Aparicio, Begoña Espinosa, Elena Martínez, Pablo Chico-Sánchez, Rosario Sánchez, José-Manuel Ramos-Rincón
OBJECTIVES: To study differences in the emergency department treatment of acute poisoning according to biological sex of patients and to assess adherence to care quality indicators. MATERIAL AND METHODS: Retrospective observational study including all cases of acute poisoning diagnosed in patients over the age of 14 years treated in a tertiary care hospital emergency department over a period of 4 years. We analyzed demographic variables, substance type and reason for acute poisoning, degree of adherence to quality indicators, and discharge destination...
April 2024: Emergencias: Revista de la Sociedad Española de Medicina de Emergencias
https://read.qxmd.com/read/38597610/netactivity-enhances-transcriptional-signals-by-combining-gene-expression-into-robust-gene-set-activity-scores-through-interpretable-autoencoders
#17
JOURNAL ARTICLE
Carlos Ruiz-Arenas, Irene Marín-Goñi, Liewei Wang, Idoia Ochoa, Luis A Pérez-Jurado, Mikel Hernaez
Grouping gene expression into gene set activity scores (GSAS) provides better biological insights than studying individual genes. However, existing gene set projection methods cannot return representative, robust, and interpretable GSAS. We developed NetActivity, a machine learning framework that generates GSAS based on a sparsely-connected autoencoder, where each neuron in the inner layer represents a gene set. We proposed a three-tier training that yielded representative, robust, and interpretable GSAS. NetActivity model was trained with 1518 GO biological processes terms and KEGG pathways and all GTEx samples...
April 10, 2024: Nucleic Acids Research
https://read.qxmd.com/read/38586911/essential-thrombocythaemia-a-contemporary-approach-with-new-drugs-on-the-horizon
#18
REVIEW
Francisca Ferrer-Marín, Juan Carlos Hernández-Boluda, Alberto Alvarez-Larrán
Essential thrombocythaemia (ET) is a myeloproliferative neoplasm characterized by an increased risk of vascular complications and a tendency to progress to myelofibrosis and acute leukaemia. ET patients have traditionally been stratified into two thrombosis risk categories based on age older than 60 years and a history of thrombosis. More recently, the revised IPSET-thrombosis scoring system, which accounts for the increased risk linked to the JAK2 mutation, has been incorporated into most expert recommendations...
April 8, 2024: British Journal of Haematology
https://read.qxmd.com/read/38581147/understanding-mechanisms-behind-the-oily-mouthcoating-perception-of-pure-vegetable-oils-using-tribology
#19
JOURNAL ARTICLE
Maria Tecuanhuey, Alicia Girardi, Lucia Corrà, Josep Busom Descarrega, Laurent Sagalowicz, Marine Devezeaux de Lavergne
Tribology is the science of measuring friction between surfaces. While it has been widely used to investigate texture sensations of food applications, it is seldom applied in pure edible oil systems. In this research, we measured friction, viscosity, and solid fat content (SFC) of nine vegetable oils at 30 and 60°C. Polarized static microscopy was used to assess crystal formation between 60 and 30°C. Descriptive sensory analysis and quantification of oral oil coatings were performed on the oils at 60°C...
April 2024: Journal of Texture Studies
https://read.qxmd.com/read/38580186/a-new-invertebrate-npy-like-polypeptide-zoanpy-from-the-zoanthus-sociatus-as-a-novel-ligand-of-human-npy-y2-receptor-rescues-vascular-insufficiency-via-plc-pkc-and-src-fak-dependent-signaling-pathways
#20
JOURNAL ARTICLE
Qian Chen, Nan Xu, Chen Zhao, Yulin He, Sandy Hio Tong Kam, Xue Wu, Pan Huang, Min Yang, Clarence Tsun Ting Wong, Gandhi Radis-Baptista, Benqin Tang, Guangyi Fan, Guiyi Gong, Simon Ming-Yuen Lee
Our recent multi-omics studies have revealed rich sources of novel bioactive proteins and polypeptides from marine organisms including cnidarians. In the present study, we initially conducted a transcriptomic analysis to review the composition profile of polypeptides from Zoanthus sociatus. Then, a newly discovered NPY-like polypeptide-ZoaNPY was selected for further in silico structural, binding and virtually pharmacological studies. To evaluate the pro-angiogenic effects of ZoaNPY, we employed an in vitro HUVECs model and an in vivo zebrafish model...
April 3, 2024: Pharmacological Research: the Official Journal of the Italian Pharmacological Society
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