keyword
https://read.qxmd.com/read/38569543/gut-microbiome-and-metabolome-profiling-in-framingham-heart-study-reveals-cholesterol-metabolizing-bacteria
#1
JOURNAL ARTICLE
Chenhao Li, Martin Stražar, Ahmed M T Mohamed, Julian A Pacheco, Rebecca L Walker, Tina Lebar, Shijie Zhao, Julia Lockart, Andrea Dame, Kumar Thurimella, Sarah Jeanfavre, Eric M Brown, Qi Yan Ang, Brittany Berdy, Dallis Sergio, Rachele Invernizzi, Antonio Tinoco, Gleb Pishchany, Ramachandran S Vasan, Emily Balskus, Curtis Huttenhower, Hera Vlamakis, Clary Clish, Stanley Y Shaw, Damian R Plichta, Ramnik J Xavier
Accumulating evidence suggests that cardiovascular disease (CVD) is associated with an altered gut microbiome. Our understanding of the underlying mechanisms has been hindered by lack of matched multi-omic data with diagnostic biomarkers. To comprehensively profile gut microbiome contributions to CVD, we generated stool metagenomics and metabolomics from 1,429 Framingham Heart Study participants. We identified blood lipids and cardiovascular health measurements associated with microbiome and metabolome composition...
March 21, 2024: Cell
https://read.qxmd.com/read/38393002/untargeted-plasma-metabolomic-profiling-in-patients-with-depressive-disorders-a-preliminary-study
#2
JOURNAL ARTICLE
Alexander A Chernonosov, Irina A Mednova, Lyudmila A Levchuk, Ekaterina O Mazurenko, Olga V Roschina, German G Simutkin, Nikolay A Bokhan, Vladimir V Koval, Svetlana A Ivanova
Depressive disorder is a multifactorial disease that is based on dysfunctions in mental and biological processes. The search for biomarkers can improve its diagnosis, personalize therapy, and lead to a deep understanding of the biochemical processes underlying depression. The purpose of this work was a metabolomic analysis of blood serum to classify patients with depressive disorders and healthy individuals using Compound Discoverer software. Using high-resolution mass spectrometry, blood plasma samples from 60 people were analyzed, of which 30 were included in a comparison group (healthy donors), and 30 were patients with a depressive episode (F32...
February 6, 2024: Metabolites
https://read.qxmd.com/read/38356076/salivary-metabolites-as-potential-predictive-biomarkers-for-lung-surgery-complications-a-retrospective-cross-sectional-study
#3
JOURNAL ARTICLE
Satoshi Takamori, Shigeo Ishikawa, Kaito Sato, Hikaru Watanabe, Jun Suzuki, Hiroyuki Oizumi, Satoshi Shiono, Tetsuro Uchida, Naoki Okuyama, Kaoru Edamatsu, Mitsuyoshi Iino, Masahiro Sugimoto
PURPOSE: Saliva is often used as a tool for identifying systemic diseases because of the noninvasive nature of its collection. Moreover, salivary metabolites can be potential predictive factors for postoperative survival. We conducted the present study to establish whether salivary metabolites can function as predictive biomarkers for lung surgery complications. METHODS: Unstimulated salivary samples were collected from 412 patients before lung surgery. Salivary metabolites were analyzed comprehensively by capillary electrophoresis mass spectrometry...
February 15, 2024: Surgery Today
https://read.qxmd.com/read/37925403/a-review-on-the-role-of-gamma-butyrobetaine-hydroxylase-1-antisense-rna-1-in-the-carcinogenesis-and-tumor-progression
#4
REVIEW
Juan Hu, Jipeng Liu, Siwei Zhou, Hongliang Luo
Gamma-butyrobetaine hydroxylase 1 antisense RNA 1 (BBOX1-AS1), located on human chromosome 11 p14, emerges as a critical player in tumorigenesis with diverse oncogenic effects. Aberrant expression of BBOX1-AS1 intricately regulates various cellular processes, including cell growth, epithelial-mesenchymal transition, migration, invasion, metastasis, cell death, and stemness. Notably, the expression of BBOX1-AS1 was significantly correlated with clinical-pathological characteristics and tumor prognoses, and it could also be used for the diagnosis of lung and esophageal cancers...
November 5, 2023: Cancer Cell International
https://read.qxmd.com/read/37737636/assembling-the-anaerobic-gamma-butyrobetaine-to-tma-metabolic-pathway-in-escherichia-fergusonii-and-confirming-its-role-in-tma-production-from-dietary-l-carnitine-in-murine-models
#5
JOURNAL ARTICLE
Mohammed Dwidar, Jennifer A Buffa, Zeneng Wang, Akeem Santos, Aaron N Tittle, Xiaoming Fu, Adeline M Hajjar, Joseph A DiDonato, Stanley L Hazen
Trimethylamine-N-oxide (TMAO) is a major pro-atherogenic and pro-thrombotic metaorganismal molecule produced through the initial conversion of the dietary L -carnitine and other precursors into trimethylamine (TMA). We recently identified a dual-microbe anaerobic pathway for the metabolism of L- carnitine into TMA, in which the widely distributed cai operon in Enterobacteriaceae converts L- carnitine into gamma-butyrobetaine (γBB), followed by the degradation of γBB into TMA by the relatively rare <u>g</u>amma-<u>b</u>utyrobetaine <u>u</u>tilization ( gbu ) gene cluster present in Emergencia timonensis and few other related microbes...
September 22, 2023: MBio
https://read.qxmd.com/read/37574027/short-and-medium-chain-acylcarnitines-as-markers-of-outcome-in-diabetic-and-non-diabetic-subjects-with-acute-coronary-syndromes
#6
JOURNAL ARTICLE
Allan Davies, Florian A Wenzl, Xinmin S Li, Patric Winzap, Slayman Obeid, Roland Klingenberg, François Mach, Lorenz Räber, Olivier Muller, Christian M Matter, Reijo Laaksonen, Zeneng Wang, Stanley L Hazen, Thomas F Lüscher
BACKGROUND: Carnitine metabolism produces numerous molecular species of short-, medium-, and long-chain acylcarnitines, which play important roles in energy homeostasis and fatty acid transport in the myocardium. Given that disturbances in the carnitine metabolism are linked to cardiometabolic disease, we studied the relationship of circulating acylcarnitines with outcomes in patients with acute coronary syndromes (ACS) and evaluated differences in circulating levels of these metabolites between diabetic and non-diabetic patients...
October 15, 2023: International Journal of Cardiology
https://read.qxmd.com/read/37553674/knockout-of-tmlhe-in-mice-is-not-associated-with-autism-spectrum-disorder-phenotypes-or-motor-dysfunction-despite-low-carnitine-levels
#7
JOURNAL ARTICLE
Edgars Liepinsh, Baiba Svalbe, Gundega Stelfa, Solveiga Grinberga, Liga Zvejniece, Helgi B Schiöth, Maija Dambrova
Deletion of exon 2 of the trimethyllysine hydroxylase epsilon (TMLHE) gene was identified in probands with autism spectrum disorder (ASD). TMLHE encodes the first enzyme in carnitine biosynthesis, N6-trimethyllysine dioxygenase (TMLD). Researchers have suggested that carnitine depletion could be important for the development of ASD and cognitive, locomotor and social dysfunctions, but previous findings have been inconclusive regarding the specific role of endogenous carnitine. We developed a mouse knockout model with constitutive TMLD enzyme inactivation that exhibited a significant decrease in the carnitine by more than 90% compared to wild-type (WT) mice...
August 8, 2023: Molecular Autism
https://read.qxmd.com/read/37497645/new-small-molecule-alcohol-synthesis-by-breaking-the-space-limitation-of-the-aromatic-cage-in-pseudomonas-sp-ak1-bbox
#8
JOURNAL ARTICLE
Zhiqin Xu, Yaling Mo, Zhengwen Li, Shurong Ban, Heng Song
Fe(II)/2OG-dependent oxygenase γ-butyrobetaine hydroxylase (BBOX) stereoselectively hydroxylates inactive C-H bonds and produces L-carnitine. It has potential applications in the biosynthesis of L-carnitine and the synthesis of other small molecule alcohols. In this paper, we systematically explore the substrate range of Pseudomonas sp. AK1 BBOX (psBBOX), with emphasis on the quaternary ammonium portion of γ-butyrobetaine (γ-BB). The space limitation of the "aromatic cage" in psBBOX in the hydroxylation of large quaternary ammonium analogues was studied, and the role of four aromatic amino acid residues in the substrate binding mode was analyzed...
July 27, 2023: Organic & Biomolecular Chemistry
https://read.qxmd.com/read/37303600/cd147-facilitates-the-pathogenesis-of-psoriasis-through-glycolysis-and-h3k9me3-modification-in-keratinocytes
#9
JOURNAL ARTICLE
Chao Chen, Xiaoqing Yi, Panpan Liu, Jie Li, Bei Yan, Detian Zhang, Lei Zhu, Pian Yu, Lei Li, Jiaxiong Zhang, Yehong Kuang, Shuang Zhao, Wu Zhu, Cong Peng, Xiang Chen
Psoriasis is a chronic inflammatory skin disease featuring rapid proliferation of epidermal cells. Although elevated glycolysis flux has been reported in psoriasis, the molecular mechanisms underlying its pathogenesis remain unclear. We investigated the role of the integral membrane protein CD147 in psoriasis pathogenesis, observing its high expression in psoriatic skin lesions of humans and imiquimod (IMQ)-induced mouse models. In mouse models, genomic deletion of epidermal CD147 markedly attenuated IMQ-induced psoriatic inflammation...
2023: Research: a science partner journal
https://read.qxmd.com/read/37195024/use-of-former-food-products-in-dairy-buffalo-nutrition-in-vitro-and-in-vivo-evaluation
#10
JOURNAL ARTICLE
Gianluca Neglia, Serena Calabrò, Alessio Cotticelli, Angela Salzano, Roberta Matera, Alessandro Vastolo, Nunzia D'Onofrio, Andrea Giorgino, Elisa Martino, Maria L Balestrieri, Giuseppe Campanile
A feeding strategy that maintains high content of functional molecules in buffalo milk has been verified by giving Sorghum vulgare as green fodder, but it is not available all year round. The aim of this study was to evaluate the inclusion of former food products (FFPs) containing 87% biscuit meal (nonstructural carbohydrate: 60.1%; starch 14.7; crude protein 10.6), in the diet of buffaloes in terms of: (a) fermentation characteristics through gas production technique; (b) milk yield (MY) and quality; (c) content of some biomolecules and total antioxidant activity...
May 17, 2023: Journal of Animal Physiology and Animal Nutrition
https://read.qxmd.com/read/37046558/the-association-of-circulating-l-carnitine-%C3%AE-butyrobetaine-and-trimethylamine-n-oxide-levels-with-gastric-cancer
#11
JOURNAL ARTICLE
Ilmārs Stonāns, Jelizaveta Kuzmina, Inese Poļaka, Solveiga Grīnberga, Eduards Sevostjanovs, Edgars Liepiņš, Ilona Aleksandraviča, Daiga Šantare, Arnis Kiršners, Roberts Škapars, Andrejs Pčolkins, Ivars Tolmanis, Armands Sīviņš, Mārcis Leja, Maija Dambrova
Our study aimed to evaluate the association between gastric cancer (GC) and higher concentrations of the metabolites L-carnitine, γ-butyrobetaine (GBB) and gut microbiota-mediated trimethylamine N-oxide (TMAO) in the circulation. There is evidence suggesting that higher levels of TMAO and its precursors in blood can be indicative of either a higher risk of malignancy or indeed its presence; however, GC has not been studied in this regard until now. Our study included 83 controls without high-risk stomach lesions and 105 GC cases...
April 4, 2023: Diagnostics
https://read.qxmd.com/read/36864013/low-gamma-butyrobetaine-dioxygenase-bbox1-expression-as-a-prognostic-biomarker-in-patients-with-clear-cell-renal-cell-carcinoma-a-machine-learning-approach
#12
JOURNAL ARTICLE
Kyu-Shik Kim, Kyoung Min Moon, Kyueng-Whan Min, Woon Yong Jung, Su-Jin Shin, Seung Wook Lee, Mi Jung Kwon, Dong-Hoon Kim, Sukjoong Oh, Yung-Kyun Noh
Gamma-butyrobetaine dioxygenase (BBOX1) is a catalyst for the conversion of gamma-butyrobetaine to l-carnitine, which is detected in normal renal tubules. The purpose of this study was to analyze the prognosis, immune response, and genetic alterations associated with low BBOX1 expression in patients with clear cell renal cell carcinoma (RCC). We analyzed the relative influence of BBOX1 on survival using machine learning and investigated drugs that can inhibit renal cancer cells with low BBOX1 expression. We analyzed clinicopathologic factors, survival rates, immune profiles, and gene sets according to BBOX1 expression in a total of 857 patients with kidney cancer from the Hanyang University Hospital cohort (247 cases) and The Cancer Genome Atlas (610 cases)...
March 2, 2023: Journal of Pathology. Clinical Research
https://read.qxmd.com/read/36797190/feeding-rumen-protected-lysine-altered-immune-and-metabolic-biomarkers-in-dairy-cows-during-the-transition-period
#13
JOURNAL ARTICLE
L K Fehlberg, A R Guadagnin, B L Thomas, M Ballou, J J Loor, Y Sugimoto, I Shinzato, F C Cardoso
This experiment was conducted to determine the effects of feeding rumen-protected lysine (RPL; AjiPro-L Generation 3, Ajinomoto Health and Nutrition North America Inc.) from -26 ± 4.6 d prepartum (0.54% RPL of dietary dry matter intake) to 28 d postpartum (0.39% RPL of dietary dry matter intake) on immunometabolic status and liver composition in dairy cows. Seventy-five multiparous Holstein cows, blocked by parity, previous 305-d mature-equivalent milk production, expected calving date, and body condition score during the far-off dry period were assigned to 1 of 4 dietary treatments in a randomized, complete block design with a 2 × 2 factorial arrangement of treatments...
February 14, 2023: Journal of Dairy Science
https://read.qxmd.com/read/36771464/neither-trimethylamine-n-oxide-nor-trimethyllysine-is-associated-with-atherosclerosis-a-cross-sectional-study-in-older-japanese-adults
#14
JOURNAL ARTICLE
Jubo Bhuiya, Yoshitomo Notsu, Hironori Kobayashi, Abu Zaffar Shibly, Abdullah Md Sheikh, Ryota Okazaki, Kazuto Yamaguchi, Atsushi Nagai, Toru Nabika, Takafumi Abe, Masayuki Yamasaki, Minoru Isomura, Shozo Yano
Recent evidence suggests that trimethylamine-N-oxide (TMAO), a metabolite of L-carnitine and choline, is linked to atherosclerosis and cardiovascular diseases. As TMAO content is very high in fish, we raised the following question: why do Japanese people, who consume lots of fish, show a low risk of atherosclerosis? To address this question, we investigated the effects of TMAO and other L-carnitine-related metabolites on carotid intima-media thickness (IMT). Participants were recruited from a small island and a mountainous region...
February 2, 2023: Nutrients
https://read.qxmd.com/read/36697476/buffalo-milk-and-rumen-fluid-metabolome-are-significantly-affected-by-green-feed
#15
JOURNAL ARTICLE
G Neglia, A Cotticelli, A Vassetti, R Matera, A Staropoli, F Vinale, A Salzano, G Campanile
The use of green feed for livestock breeding is an important strategy to encounter both the increasing demand for animal derived products and the perceptions of the consumers regarding animal welfare and sustainability. The aim of this study was to compare different feeding strategies in lactating water buffaloes by using a metabolomic approach. The study was carried out on 32 milking buffaloes that were randomly divided into two groups for a total period of 90 days (3 sampling times). DD Group (dry diet) received a standard total mixed ratio (TMR) characterized by dry forages and concentrates; ZG Group (zero grazing) fed an isoenergetic and isoproteic diet obtained using 30% of sorghum as green forage...
January 25, 2023: Scientific Reports
https://read.qxmd.com/read/36436355/apoe-%C3%AE%C2%B54-and-alzheimer-s-disease-diagnosis-associated-differences-in-l-carnitine-gbb-tmao-and-acylcarnitines-in-blood-and-brain
#16
JOURNAL ARTICLE
Claire J C Huguenard, Adam Cseresznye, James E Evans, Teresa Darcey, Aurore Nkiliza, Andrew P Keegan, Cheryl Luis, David A Bennett, Zoe Arvanitakis, Hussein N Yassine, Michael Mullan, Fiona Crawford, Laila Abdullah
BACKGROUND: The apolipoprotein E (APOE) ε4 allele, involved in fatty acid (FA) metabolism, is a major genetic risk factor for Alzheimer's disease (AD). This study examined the influence of APOE genotypes on blood and brain markers of the L-carnitine system, necessary for fatty acid oxidation (FAO), and their collective influence on the clinical and pathological outcomes of AD. METHODS: L-carnitine, its metabolites γ-butyrobetaine (GBB) and trimethylamine-n-oxide (TMAO), and its esters (acylcarnitines) were analyzed in blood from predominantly White community/clinic-based individuals (n = 372) and in plasma and brain from the Religious Order Study (ROS) (n = 79) using liquid chromatography tandem mass spectrometry (LC-MS/MS)...
August 11, 2022: Current Research in Translational Medicine
https://read.qxmd.com/read/36428843/divergent-effects-of-glycemic-control-and-bariatric-surgery-on-circulating-concentrations-of-tmao-in-newly-diagnosed-t2d-patients-and-morbidly-obese
#17
JOURNAL ARTICLE
Marina Canyelles, Antonio Pérez, Alexandra Junza, Inka Miñambres, Oscar Yanes, Helena Sardà, Noemí Rotllan, Josep Julve, José Luis Sánchez-Quesada, Mireia Tondo, Joan Carles Escolà-Gil, Francisco Blanco-Vaca
High circulating concentrations of the gut microbiota-derived metabolite trimethylamine N-oxide (TMAO) are significantly associated with the risk of obesity and type 2 diabetes (T2D). We aimed at evaluating the impact of glycemic control and bariatric surgery on circulating concentrations of TMAO and its microbiota-dependent intermediate, γ-butyrobetaine (γBB), in newly diagnosed T2D patients and morbidly obese subjects following a within-subject design. Based on HbA1c concentrations, T2D patients achieved glycemic control...
November 14, 2022: Diagnostics
https://read.qxmd.com/read/36232386/breed-and-feeding-system-impact-the-bioactive-anti-inflammatory-properties-of-bovine-milk
#18
JOURNAL ARTICLE
Angela Salzano, Maria Chiara Di Meo, Nunzia D'Onofrio, Giovanna Bifulco, Alessio Cotticelli, Francesca Licitra, Antonio Iraci Fuintino, Giuseppe Cascone, Maria Luisa Balestrieri, Ettore Varricchio, Giuseppe Campanile
In the present study, we aimed at assessing the influence of breed and feeding system on the bovine milk profile of betaines and carnitines and milk capacity in counteracting the inflammatory endothelial cell (EC) damage induced by interleukin (IL)-6. In the first experimental design, two breeds were chosen ( Holstein vs. Modicana ) to investigate the biomolecule content and antioxidant capacity in milk and dairy products. In the second experimental design, two feeding systems (pasture vs. total mixed ratio) were tested only in Holstein to evaluate the possible effect on the functional profile of milk and dairy products...
September 21, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/36229534/glomerular-proteomic-profiling-of-kidney-biopsies-with-hypertensive-nephropathy-reveals-a-signature-of-disease-progression
#19
JOURNAL ARTICLE
Håvard Mikkelsen, Bjørn E Vikse, Oystein Eikrem, Andreas Scherer, Kenneth Finne, Tarig Osman, Hans-Peter Marti
Hypertensive nephropathy (HN) requires a kidney biopsy as diagnostic gold-standard but histological findings are unspecific and specific prognostic markers are missing. We aimed at identifying candidate prognostic markers based on glomerular protein signatures. We studied adult patients (n = 17) with eGFR >30 ml/min/1.73m2 and proteinuria <3 g/d from the Norwegian Kidney Biopsy Registry, including subjects non progressing (NP, n = 9), or progressing (P, n = 8) to end-stage renal disease (ESRD) within an average follow-up of 22 years...
October 14, 2022: Hypertension Research: Official Journal of the Japanese Society of Hypertension
https://read.qxmd.com/read/36173728/interleukin-6-blockade-reduces-salt-induced-cardiac-inflammation-and-fibrosis-in-subtotal-nephrectomized-mice
#20
JOURNAL ARTICLE
Hiroya Tanaka, Ting Sun, Hiroshi Kinashi, Keisuke Kamiya, Makoto Yamaguchi, Hironobu Nobata, Fumiko Sakata, Hangsoo Kim, Masashi Mizuno, Shunnosuke Kunoki, Yukinao Sakai, Akiyoshi Hirayama, Tomoyoshi Soga, Kazuhiro Yoshikawa, Takuji Ishimoto, Yasuhiko Ito
Cardiovascular disease is the most common comorbidity in chronic kidney disease (CKD) patients, affecting both their prognosis and quality of life. Cardiac fibrosis is common in CKD patients with left ventricular diastolic dysfunction, and it is associated with increased risk of heart failure and mortality. Recent evidence suggests that high salt intake activates immune responses associated with local accumulation of sodium. We reported that high salt intake promotes cardiac inflammation in subtotal nephrectomized (Nx) mice...
September 29, 2022: American Journal of Physiology. Renal Physiology
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