keyword
https://read.qxmd.com/read/38704731/logic-based-strategy-for-spatiotemporal-release-of-dual-extracellular-vesicles-in-osteoarthritis-treatment
#1
JOURNAL ARTICLE
Shiyu Li, Weihan Zheng, Wenfeng Deng, Ziyue Li, Jiaxin Yang, Huihui Zhang, Zhenning Dai, Weiwei Su, Zi Yan, Wanting Xue, Xinyi Yun, Siqi Mi, Jianlin Shen, Xiang Luo, Ling Wang, Yaobin Wu, Wenhua Huang
To effectively treat osteoarthritis (OA), the existing inflammation must be reduced before the cartilage damage can be repaired; this cannot be achieved with a single type of extracellular vesicles (EVs). Here, a hydrogel complex with logic-gates function is proposed that can spatiotemporally controlled release two types of EVs: interleukin 10 (IL-10)+ EVs to promote M2 polarization of macrophage, and SRY-box transcription factor 9 (SOX9)+ EVs to increase cartilage matrix synthesis. Following dose-of-action screening, the dual EVs are loaded into a matrix metalloporoteinase 13 (MMP13)-sensitive self-assembled peptide hydrogel (KM13E) and polyethylene glycol diacrylate/gelatin methacryloyl-hydrogel microspheres (PGE), respectively...
May 5, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38704609/general-regulatory-factors-exert-differential-effects-on-nucleosome-sliding-activity-of-the-isw1a-complex
#2
JOURNAL ARTICLE
Andrea Oyarzún-Cisterna, Cristián Gidi, Fernanda Raiqueo, Roberto Amigo, Camila Rivas, Marcela Torrejón, José L Gutiérrez
BACKGROUND: Chromatin dynamics is deeply involved in processes that require access to DNA, such as transcriptional regulation. Among the factors involved in chromatin dynamics at gene regulatory regions are general regulatory factors (GRFs). These factors contribute to establishment and maintenance of nucleosome-depleted regions (NDRs). These regions are populated by nucleosomes through histone deposition and nucleosome sliding, the latter catalyzed by a number of ATP-dependent chromatin remodeling complexes, including ISW1a...
May 4, 2024: Biological Research
https://read.qxmd.com/read/38704373/carbon-nitrogen-transmutation-in-polycyclic-arenol-skeletons-to-access-n-heteroarenes
#3
JOURNAL ARTICLE
Hong Lu, Yu Zhang, Xiu-Hong Wang, Ran Zhang, Peng-Fei Xu, Hao Wei
Developing skeletal editing tools is not a trivial task, and realizing the corresponding single-atom transmutation in a ring system without altering the ring size is even more challenging. Here, we introduce a skeletal editing strategy that enables polycyclic arenols, a highly prevalent motif in bioactive molecules, to be readily converted into N-heteroarenes through carbon-nitrogen transmutation. The reaction features selective nitrogen insertion into the C-C bond of the arenol frameworks by azidative dearomatization and aryl migration, followed by ring-opening, and ring-closing (ANRORC) to achieve carbon-to-nitrogen transmutation in the aromatic framework of the arenol...
May 4, 2024: Nature Communications
https://read.qxmd.com/read/38704026/the-mitochondrial-trna-derived-fragment-mt-trf-leu-taa-couples-mitochondrial-metabolism-to-insulin-secretion
#4
JOURNAL ARTICLE
Cecile Jacovetti, Chris Donnelly, Véronique Menoud, Mara Suleiman, Cristina Cosentino, Jonathan Sobel, Kejing Wu, Karim Bouzakri, Piero Marchetti, Claudiane Guay, Bengt Kayser, Romano Regazzi
OBJECTIVE: The contribution of the mitochondrial electron transfer system to insulin secretion involves more than just energy provision. We identified a small RNA fragment (mt-tRF-LeuTAA ) derived from the cleavage of a mitochondrially-encoded tRNA that is conserved between mice and humans. The role of mitochondrially-encoded tRNA-derived fragments remains unknown. This study aimed to characterize the impact of mt-tRF-LeuTAA , on mitochondrial metabolism and pancreatic islet functions...
May 2, 2024: Molecular Metabolism
https://read.qxmd.com/read/38703840/biodegradable-film-mulching-increases-soil-microbial-network-complexity-and-decreases-nitrogen-cycling-gene-abundance
#5
JOURNAL ARTICLE
Hao Zhang, Duntao Shu, Jiaqi Zhang, Xuejun Liu, Kai Wang, Rui Jiang
Biodegradable plastic films have emerged as a substitute for conventional plastic films. Nevertheless, responses of plant-associated microbiomes to the application of biodegradable film mulching at field scale have received little attention. A field experiment was conducted to assess the influence of different film mulching treatments on various microbial attributes and nitrogen (N) cycling functional genes in bulk and rhizosphere soils. Biodegradable film mulching raised the bacterial Shannon index in bulk soils but not in rhizosphere soils...
May 2, 2024: Science of the Total Environment
https://read.qxmd.com/read/38702387/build-and-operation-of-a-custom-3d-multicolor-single-molecule-localization-microscope
#6
REVIEW
Rory M Power, Aline Tschanz, Timo Zimmermann, Jonas Ries
Single-molecule localization microscopy (SMLM) enables imaging scientists to visualize biological structures with unprecedented resolution. Particularly powerful implementations of SMLM are capable of three-dimensional, multicolor and high-throughput imaging and can yield key biological insights. However, widespread access to these technologies is limited, primarily by the cost of commercial options and complexity of de novo development of custom systems. Here we provide a comprehensive guide for interested researchers who wish to establish a high-end, custom-built SMLM setup in their laboratories...
May 3, 2024: Nature Protocols
https://read.qxmd.com/read/38702324/wide-incident-angle-polarization-independent-broadband-absorption-metastructure-without-external-resistive-elements-by-using-a-trapezoidal-structure
#7
JOURNAL ARTICLE
Thanh Son Pham, Haiyu Zheng, Liangyao Chen, Bui Xuan Khuyen, YoungPak Lee
The absorption of electromagnetic waves in a broadband frequency range with polarization insensitivity and incidence-angle independence is greatly needed in modern technology applications. Many structures based on metamaterials have been suggested for addressing these requirements; these structures were complex multilayer structures or used special materials or external electric components, such as resistive ones. In this paper, we present a metasurface structure that was fabricated simply by employing the standard printed-circuit-board technique but provides a high absorption above 90% in a broadband frequency range from 12...
May 3, 2024: Scientific Reports
https://read.qxmd.com/read/38701784/cox7a1-controls-skeletal-muscle-physiology-and-heart-regeneration-through-complex-iv-dimerization
#8
JOURNAL ARTICLE
Carolina García-Poyatos, Prateek Arora, Enrique Calvo, Ines J Marques, Nick Kirschke, Maria Galardi-Castilla, Carla Lembke, Marco Meer, Paula Fernández-Montes, Alexander Ernst, David Haberthür, Ruslan Hlushchuk, Jesús Vázquez, Peter Vermathen, José Antonio Enríquez, Nadia Mercader
The oxidative phosphorylation (OXPHOS) system is intricately organized, with respiratory complexes forming super-assembled quaternary structures whose assembly mechanisms and physiological roles remain under investigation. Cox7a2l, also known as Scaf1, facilitates complex III and complex IV (CIII-CIV) super-assembly, enhancing energetic efficiency in various species. We examined the role of Cox7a1, another Cox7a family member, in supercomplex assembly and muscle physiology. Zebrafish lacking Cox7a1 exhibited reduced CIV2 formation, metabolic alterations, and non-pathological muscle performance decline...
May 2, 2024: Developmental Cell
https://read.qxmd.com/read/38701567/nlrp3-inflammasome-and-its-role-in-autoimmune-diseases-a-promising-therapeutic-target
#9
REVIEW
Wenxuan Ren, Ying Sun, Lei Zhao, Xiaoguang Shi
The NOD-like receptor protein 3 (NLRP3) inflammasome is a protein complex that regulates innate immune responses by activating caspase-1 and the inflammatory cytokines IL-1β and IL-18. Numerous studies have highlighted its crucial role in the pathogenesis and development of inflammatory bowel disease, rheumatoid arthritis, systemic lupus erythematosus, autoimmune thyroid diseases, and other autoimmune diseases. Therefore, investigating the underlying mechanisms of NLRP3 in disease and targeted drug therapies holds clinical significance...
May 2, 2024: Biomedicine & Pharmacotherapy
https://read.qxmd.com/read/38701353/an-organodiphosphate-containing-polyoxoniobate-ring-and-its-assembly-into-a-three-dimensional-framework-through-hydrogen-bonding
#10
JOURNAL ARTICLE
Yu-Chen Cong, Hui-Ping Xiao, Ping-Wei Cai, Cai Sun, Yan-Qiong Sun, Ming-Qiang Qi, Xin-Xiong Li, Shou-Tian Zheng
In this work, a novel organodiphosphate-containing inorganic-organic hybrid polyoxoniobate (PONb) ring {(PO3 CH2 CH2 PO3 H)4 Nb8 O16 }4- ( Nb 8 P 8 ) has been achieved by a one-pot hydrothermal method. The ring is constructed from a tetragonal {Nb8 O36 } motif and four {PO3 CH2 CH2 PO3 H} ligands. Interestingly, Nb 8 P 8 can be joined together via K-H2 O clusters {K2 (H2 O)4 (OH)2 } to form one-dimensional chains {[K2 (H2 O)4 (OH)2 ] Nb 8 P 8 } n and further linked by {Cu(en)2 }2+ (en = ethylenediamine) complexes, resulting in a three-dimensional supramolecular framework {[Cu(en)2 ]2 [K2 (H2 O)4 (OH)2 ] Nb 8 P 8 }·3en·H2 O ( 1 )...
May 3, 2024: Inorganic Chemistry
https://read.qxmd.com/read/38701344/hippocampal-excitation-inhibition-balance-underlies-the-5-ht2c-receptor-in-modulating-depressive-behaviours
#11
JOURNAL ARTICLE
Hu-Jiang Shi, Yi-Ren Xue, Hua Shao, Cheng Wei, Ting Liu, Jie He, Yu-Hao Yang, Hong-Mei Wang, Na Li, Si-Qiang Ren, Lei Chang, Zhen Wang, Li-Juan Zhu
The implication of 5-hydroxytryptamine 2C receptor (5-HT2CR) in depression is a topic of debate, and the underlying mechanisms remain largely unclear. We now elucidate hippocampal excitation-inhibition (E/I) balance underlies the regulatory effects of 5-HT2CR in depression. Molecular biological analyses showed that chronic mild stress (CMS) reduced the expression of 5-HT2CR in hippocampus. We revealed that inhibition of 5-HT2CR induced depressive-like behaviors, reduced GABA release and shifted the E/I balance towards excitation in CA3 pyramidal neurons by using behavioral analyses, microdialysis coupled with mass spectrum, and electrophysiological recording...
May 3, 2024: Brain
https://read.qxmd.com/read/38701111/deciphering-the-cofilin-oligomers-via-intermolecular-disulfide-bond-formation-a-coarse-grained-molecular-dynamics-approach-to-understanding-cofilin-s-regulation-on-actin-filaments
#12
JOURNAL ARTICLE
Chengxuan Li, Ting-Yi Wei, Margaret S Cheung, Min-Yeh Tsai
Cofilin, a key actin-binding protein, orchestrates the dynamics of the actomyosin network through its actin-severing activity and by promoting the recycling of actin monomers. Recent experiments suggest that cofilin forms functionally distinct oligomers via thiol post-translational modifications (PTMs) that promote actin nucleation and assembly. Despite these advances, the structural conformations of cofilin oligomers that modulate actin activity remain elusive because there are combinatorial ways to oxidize thiols in cysteines to form disulfide bonds rapidly...
May 3, 2024: Journal of Physical Chemistry. B
https://read.qxmd.com/read/38700840/graphene-quantum-dots-nanoantibiotic-sensitized-tio-2-x-heterojunctions-for-sonodynamic-nanocatalytic-therapy-of-multidrug-resistant-bacterial-infections
#13
JOURNAL ARTICLE
Ying Qian, Jingming Wang, Xudong Geng, Bingqing Jia, Lei Wang, Yong-Qiang Li, Bijiang Geng, Weimin Huang
The exploration of sonodynamic therapy (SDT) as a possible replacement for antibiotics in antibacterial treatment by creating reactive oxygen species (ROS) has been suggested as a non-drug-resistant theranostic method. However, the low-efficiency ROS generation and complex tumor microenvironment (TME) which can deplete ROS and promote tumor growth would cause the compromised antibacterial efficacy of SDT. Herein, through an oxygen vacancy engineering strategy, we synthesize TiO2-x microspheres with an abundance of Ti3+ defects using a straightforward reductant co-assembly approach...
May 3, 2024: Advanced Healthcare Materials
https://read.qxmd.com/read/38700332/validation-of-aminodeoxychorismate-synthase-and-anthranilate-synthase-as-novel-targets-for-bispecific-antibiotics-inhibiting-conserved-protein-protein-interactions
#14
JOURNAL ARTICLE
Franziska Jasmin Funke, Sandra Schlee, Reinhard Sterner
UNLABELLED: Multi-resistant bacteria are a rapidly emerging threat to modern medicine. It is thus essential to identify and validate novel antibacterial targets that promise high robustness against resistance-mediating mutations. This can be achieved by simultaneously targeting several conserved function-determining protein-protein interactions in enzyme complexes from prokaryotic primary metabolism. Here, we selected two evolutionary related glutamine amidotransferase complexes, aminodeoxychorismate synthase and anthranilate synthase, that are required for the biosynthesis of folate and tryptophan in most prokaryotic organisms...
May 3, 2024: Applied and Environmental Microbiology
https://read.qxmd.com/read/38700019/chiral-induction-in-a-self-assembled-pd4-coordination-cage-with-chiral-guests
#15
JOURNAL ARTICLE
Raghunath Singha, Pankaj Maity, Dipak Samanta
The dynamic interplay of coordination bonds within metal-organic cages offers a unique avenue for structural evolution in response to external stimuli, presenting a promising strategy for the construction of chiral assemblies. This adaptability is crucial for the selective synthesis of homochiral assemblies and advancement of asymmetric catalysis. In this study, we report the self-assembly of an achiral square-planar Pd(II) acceptor with a C2-symmetric tetrapyridyl donor resulted in the formation of a racemic mixture of the chiral octahedral cage Pd4L2...
May 3, 2024: Chemistry: a European Journal
https://read.qxmd.com/read/38699929/multiple-rna-rapid-in-situ-imaging-based-on-cas9-code-key-system
#16
JOURNAL ARTICLE
Ruiwei Hu, Wei Yang, Jia Li, Lanxin Jiang, Menghan Li, Mengxuan Zhang, Yuexi Kang, Xiaoxue Cheng, Shasha Zhu, Lina Zhao, Wen He, Minghui Guo, Shijia Ding, Haiping Wu, Wei Cheng
Existing RNA in situ imaging strategies mostly utilize parallel repetitive nucleic acid self-assembly to achieve multiple analysis, with limitations of complicated systems and cumbersome steps. Here, a Cas9 code key system with key probe (KP) encoder and CRISPR/Cas9 signal exporter is developed. This system triggers T-protospacer adjacent motif (T-PAM structural transitions of multiple KP encoders to form coding products with uniform single-guide RNA (sgRNA) target sequences as tandem nodes. Only single sgRNA/Cas9 complex is required to cleave multiple coding products, enabling efficient "many-to-one" tandem signaling, and non-collateral cleavage activity-dependent automatic signaling output through active introduction of mismatched bases...
May 3, 2024: Small Methods
https://read.qxmd.com/read/38699923/transformative-dynamics-self-assembly-of-iron-oxide-hydroxide-nanorods-into-iron-oxide-microcubes-for-enhanced-perfluoroalkyl-substance-remediation
#17
JOURNAL ARTICLE
Novuhulu Rhakho, Manav Saxena, Nihar R Pradhan, Arvind H Jadhav, Ali Altaee, Akshaya K Samal
We report the controlled synthesis of iron oxide microcubes (IOMCs) through the self-assembly arrays of ferric oxide hydroxide nanorods (NRs). The formation of IOMCs involves a complex interplay of nucleation, self-assembly, and growth mechanisms influenced by time, thermal treatment, and surfactant dynamics. The self-assembly of vertically aligned NRs into IOMCs is controlled by dynamic magnetism properties and capping agents like cetyltrimethylammonium bromide (CTAB), whose concentration and temperature modulation dictate growth kinetics and structural uniformity...
May 3, 2024: Langmuir: the ACS Journal of Surfaces and Colloids
https://read.qxmd.com/read/38699866/axial-coordinated-manganese%C3%A2-porphyrin-tetraazaporphyrin-4-10-phenylanthracen-9-yl-pyridine-dyads-self-assembly-structure-and-spectral-properties-in-ground-and-excited-states
#18
JOURNAL ARTICLE
Ekaterina Ovchenkova, Arshak Tsatsuryan, Nataliya Bichan, Matvey Gruzdev, Nadezhda Kudryakova, Pavel Knyazev, Fedor Gostev, Victor Nadtochenko, Tatyana Lomova
Self-assembly of new donor-acceptor systems based on (5,10,15,20-tetraphenylporphinato)manganese(III)/(5,10,15,20-tetra-4-tert-butylphenylporphinato)manganese(III)/(octakis(4-tert-butylphenyl)tetraazaporphinato)manganese(III) acetate ((AcO)MnTPP/(AcO)MnTBPP/(AcO)MnTAP) and 4-(10-phenylanthracen-9-yl)pyridine (PyAn) was studied using fluorescence spectroscopy and mass spectrometry. It was found that the coordination complexes of 1:1 composition (dyads) are formed in toluene. The spectral properties, the chemical structures and redox behavior of the dyads were described using 1H NMR, IR, EPR spectroscopy and cyclic voltammetry, respectively...
May 3, 2024: Chemistry, An Asian Journal
https://read.qxmd.com/read/38699275/photochemical-three-component-assembly-of-tri-substituted-oxazoles-through-a-carbenic-phosphorus-nitrile-hybrid-ylide-formation-trapping-cascade
#19
JOURNAL ARTICLE
Xingchen Ye, Huaijin Pan, Yong Huang, Jiean Chen, Zhaofeng Wang
Construction of complex molecular skeletons with ubiquitous chemical feedstocks in a single transformation is highly appealing in organic synthesis. We report a novel visible-light-induced three-component reaction for the construction of complex 2,4,5-trisubstituted oxazoles, which are valuable in medicinal chemistry, from simple and readily available iodonium-phosphonium hybrid ylides, carboxylic acids, and nitriles. This reaction features a carbenic phosphorus-nitrile hybrid ylide formation/trapping cascade, in which a photo-generated α-phosphonium carbene acts as a sequence trigger...
May 1, 2024: Chemical Science
https://read.qxmd.com/read/38698221/synaptotagmin-11-facilitates-assembly-of-a-presynaptic-signaling-complex-in-post-golgi-cargo-vesicles
#20
JOURNAL ARTICLE
Luca Trovò, Stylianos Kouvaros, Jochen Schwenk, Diego Fernandez-Fernandez, Thorsten Fritzius, Pascal Dominic Rem, Simon Früh, Martin Gassmann, Bernd Fakler, Josef Bischofberger, Bernhard Bettler
GABAB receptors (GBRs), the G protein-coupled receptors for GABA, regulate synaptic transmission throughout the brain. A main synaptic function of GBRs is the gating of Cav2.2-type Ca2+ channels. However, the cellular compartment where stable GBR/Cav2.2 signaling complexes form remains unknown. In this study, we demonstrate that the vesicular protein synaptotagmin-11 (Syt11) binds to both the auxiliary GBR subunit KCTD16 and Cav2.2 channels. Through these dual interactions, Syt11 recruits GBRs and Cav2.2 channels to post-Golgi vesicles, thus facilitating assembly of GBR/Cav2...
May 2, 2024: EMBO Reports
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