keyword
https://read.qxmd.com/read/38728189/deep-trans-omic-network-fusion-for-molecular-mechanism-of-alzheimer-s-disease
#1
JOURNAL ARTICLE
Linhui Xie, Yash Raj, Pradeep Varathan, Bing He, Meichen Yu, Kwangsik Nho, Paul Salama, Andrew J Saykin, Jingwen Yan
BACKGROUND: There are various molecular hypotheses regarding Alzheimer's disease (AD) like amyloid deposition, tau propagation, neuroinflammation, and synaptic dysfunction. However, detailed molecular mechanism underlying AD remains elusive. In addition, genetic contribution of these molecular hypothesis is not yet established despite the high heritability of AD. OBJECTIVE: The study aims to enable the discovery of functionally connected multi-omic features through novel integration of multi-omic data and prior functional interactions...
May 9, 2024: Journal of Alzheimer's Disease: JAD
https://read.qxmd.com/read/38727712/parallel-processing-of-quickly-and-slowly-mobilized-reserve-vesicles-in-hippocampal-synapses
#2
JOURNAL ARTICLE
Juan Jose Rodriguez Gotor, Kashif Mahfooz, Isabel Perez-Otano, John F Wesseling
Vesicles within presynaptic terminals are thought to be segregated into a variety of readily releasable and reserve pools. The nature of the pools and trafficking between them is not well understood, but pools that are slow to mobilize when synapses are active are often assumed to feed pools that are mobilized more quickly, in a series. However, electrophysiological studies of synaptic transmission have suggested instead a parallel organization where vesicles within slowly and quickly mobilized reserve pools would separately feed independent reluctant- and fast-releasing subdivisions of the readily releasable pool...
May 10, 2024: ELife
https://read.qxmd.com/read/38727249/current-evidence-of-synaptic-dysfunction-after-stroke-cellular-and-molecular-mechanisms
#3
REVIEW
Chuan Li, Min Jiang, Zhi-Ting Fang, Zhiying Chen, Li Li, Ziying Liu, Junmin Wang, Xiaoping Yin, Jian Wang, Moxin Wu
BACKGROUND: Stroke is an acute cerebrovascular disease in which brain tissue is damaged due to sudden obstruction of blood flow to the brain or the rupture of blood vessels in the brain, which can prompt ischemic or hemorrhagic stroke. After stroke onset, ischemia, hypoxia, infiltration of blood components into the brain parenchyma, and lysed cell fragments, among other factors, invariably increase blood-brain barrier (BBB) permeability, the inflammatory response, and brain edema. These changes lead to neuronal cell death and synaptic dysfunction, the latter of which poses a significant challenge to stroke treatment...
May 2024: CNS Neuroscience & Therapeutics
https://read.qxmd.com/read/38723211/anomalous-diffusion-of-synaptic-vesicles-and-its-influences-on-spontaneous-and-evoked-neurotransmission
#4
JOURNAL ARTICLE
Jacopo Lamanna, Giulia Gloria, Antonello Villa, Antonio Malgaroli
Neurons in the central nervous system communicate with each other by activating billions of tiny synaptic boutons distributed along their fine axons. These presynaptic varicosities are very crowded environments, comprising hundreds of synaptic vesicles. Only a fraction of these vesicles can be recruited in a single release episode, either spontaneous or evoked by action potentials. Since the seminal work by Fatt and Katz, spontaneous release has been modelled as a memoryless process. Nevertheless, at central synapses, experimental evidence indicates more complex features, including non-exponential distributions of release intervals and power-law behaviour in their rate...
May 9, 2024: Journal of Physiology
https://read.qxmd.com/read/38722918/lrk-1-lrrk2-and-ap-3-regulate-trafficking-of-synaptic-vesicle-precursors-through-active-zone-protein-syd-2-liprin-%C3%AE
#5
JOURNAL ARTICLE
Sravanthi S P Nadiminti, Shirley B Dixit, Neena Ratnakaran, Anushka Deb, Sneha Hegde, Sri Padma Priya Boyanapalli, Sierra Swords, Barth D Grant, Sandhya P Koushika
Synaptic vesicle proteins (SVps) are transported by the motor UNC-104/KIF1A. We show that SVps travel in heterogeneous carriers in C. elegans neuronal processes, with some SVp carriers co-transporting lysosomal proteins (SV-lysosomes). LRK-1/LRRK2 and the clathrin adaptor protein complex AP-3 play a critical role in the sorting of SVps and lysosomal proteins away from each other at the SV-lysosomal intermediate trafficking compartment. Both SVp carriers lacking lysosomal proteins and SV-lysosomes are dependent on the motor UNC-104/KIF1A for their transport...
May 2024: PLoS Genetics
https://read.qxmd.com/read/38718851/the-microtubule-dynamin-binding-inhibitor-peptide-phdp5-rescues-spatial-learning-and-memory-deficits-in-alzheimer-s-disease-model-mice
#6
JOURNAL ARTICLE
Chia-Jung Chang, Zacharie Taoufiq, Hiroshi Yamada, Takei Kohji, Takami Tomiyama, Tomohiro Umeda, Tetsuya Hori, Tomoyuki Takahashi
Dynamin is a microtubule (MT) binding protein playing a key role in vesicle endocytosis. In a brain slice model, tau loaded in presynaptic terminals assembles MTs, thereby impairing vesicle endocytosis via depletion of cytosolic dynamin. The peptide PHDP5, derived from the pleckstrin homology domain of dynamin 1, inhibits dynamin-MT interaction and rescues endocytosis and synaptic transmission impaired by tau when co-loaded in presynaptic terminals. We tested whether in vivo administration of PHDP5 could rescue their learning/memory deficits observed in Alzheimer's disease (AD) model mice...
May 6, 2024: Brain Research
https://read.qxmd.com/read/38715090/impact-of-maternal-immune-activation-and-sex-on-placental-and-fetal-brain-cytokine-and-gene-expression-profiles-in-a-preclinical-model-of-neurodevelopmental-disorders
#7
JOURNAL ARTICLE
Hadley C Osman, Rachel Moreno, Destanie Rose, Megan E Rowland, Annie Vogel Ciernia, Paul Ashwood
Maternal inflammation during gestation is associated with a later diagnosis of neurodevelopmental disorders including autism spectrum disorder (ASD). However, the specific impact of maternal immune activation (MIA) on placental and fetal brain development remains insufficiently understood. This study aimed to investigate the effects of MIA by analyzing placental and brain tissues obtained from the offspring of pregnant C57BL/6 dams exposed to polyinosinic: polycytidylic acid (poly I: C) on embryonic day 12...
May 7, 2024: Journal of Neuroinflammation
https://read.qxmd.com/read/38713200/synapsin-e-domain-is-essential-for-%C3%AE-synuclein-function
#8
JOURNAL ARTICLE
Alexandra Stavsky, Leonardo A Parra-Rivas, Shani Tal, Jen Riba, Kayalvizhi Madhivanan, Subhojit Roy, Daniel Gitler
The cytosolic proteins synucleins and synapsins are thought to play cooperative roles in regulating synaptic vesicle (SV) recycling, but mechanistic insight is lacking. Here, we identify the synapsin E-domain as an essential functional binding-partner of α-synuclein (α-syn). Synapsin E-domain allows α-syn functionality, binds to α-syn, and is necessary and sufficient for enabling effects of α-syn at synapses of cultured mouse hippocampal neurons. Together with previous studies implicating the E-domain in clustering SVs, our experiments advocate a cooperative role for these two proteins in maintaining physiologic SV clusters...
May 7, 2024: ELife
https://read.qxmd.com/read/38712265/prosaas-is-preferentially-secreted-from-neurons-during-homeostatic-scaling-and-reduces-amyloid-plaque-size-in-the-5xfad-mouse-hippocampus
#9
Samira Mitias, Nicholas Schaffer, Saaya Nair, Chelsea Hook, Iris Lindberg
The accumulation of β-amyloid in Alzheimer's disease greatly impacts neuronal health and synaptic function. To maintain network stability in the face of altered synaptic activity, neurons engage a feedback mechanism termed homeostatic scaling; however, this process is thought to be disrupted during disease progression. Previous proteomics studies have shown that one of the most highly regulated proteins in cell culture models of homeostatic scaling is the small secretory chaperone proSAAS. Our prior work has shown that proSAAS exhibits anti-aggregant behavior against alpha synuclein and β-amyloid fibrillation in vitro , and is upregulated in cell models of proteostatic stress...
April 22, 2024: bioRxiv
https://read.qxmd.com/read/38703341/a-mutual-nexus-between-epilepsy-and-%C3%AE-synuclein-a-puzzle-pathway
#10
REVIEW
Naif H Ali, Hayder M Al-Kuraishy, Ali I Al-Gareeb, Saud A Alnaaim, Helal F Hetta, Hebatallah M Saad, Gaber El-Saber Batiha
Alpha-synuclein (α-Syn) is a specific neuronal protein that regulates neurotransmitter release and trafficking of synaptic vesicles. Exosome-associated α-Syn which is specific to the central nervous system (CNS) is involved in the pathogenesis of epilepsy. Therefore, this review aimed to elucidate the possible link between α-Syn and epilepsy, and how it affects the pathophysiology of epilepsy. A neurodegenerative protein such as α-Syn is implicated in the pathogenesis of epilepsy. Evidence from preclinical and clinical studies revealed that upregulation of α-Syn induces progressive neuronal dysfunctions through induction of oxidative stress, neuroinflammation, and inhibition of autophagy in a vicious cycle with subsequent development of severe epilepsy...
May 4, 2024: Molecular Neurobiology
https://read.qxmd.com/read/38702188/spatiotemporal-organization-of-prefrontal-norepinephrine-influences-neuronal-activity
#11
JOURNAL ARTICLE
Samira Glaeser-Khan, Neil K Savalia, Jianna Cressy, Jiesi Feng, Yulong Li, Alex C Kwan, Alfred P Kaye
Norepinephrine (NE), a neuromodulator released by locus coeruleus (LC) neurons throughout cortex, influences arousal and learning through extra-synaptic vesicle exocytosis. While NE within cortical regions has been viewed as a homogenous field, recent studies have demonstrated heterogeneous axonal dynamics and advances in GPCR-based fluorescent sensors permit direct observation of the local dynamics of NE at cellular scale. To investigate how the spatiotemporal dynamics of NE release in the prefrontal cortex (PFC) affect neuronal firing, we employed in vivo two-photon imaging of layer 2/3 of PFC in order to observe fine-scale neuronal calcium and NE dynamics concurrently...
May 3, 2024: ENeuro
https://read.qxmd.com/read/38701380/exploring-the-interactions-between-two-ligands-ucb-j-and-ucb-f-and-synaptic-vesicle-glycoprotein-2-isoforms
#12
JOURNAL ARTICLE
Junhao Li, Rongfeng Zou, Andrea Varrone, Sangram Nag, Christer Halldin, Hans Ågren
In silico modeling was applied to study the efficiency of two ligands, namely, UCB-J and UCB-F , to bind to isoforms of the synaptic vesicle glycoprotein 2 (SV2) that are involved in the regulation of synaptic function in the nerve terminals, with the ultimate goal to understand the selectivity of the interaction between UCB-J and UCB-F to different isoforms of SV2. Docking and large-scale molecular dynamics simulations were carried out to unravel various binding patterns, types of interactions, and binding free energies, covering hydrogen bonding and nonspecific hydrophobic interactions, water bridge, π-π, and cation-π interactions...
May 3, 2024: ACS Chemical Neuroscience
https://read.qxmd.com/read/38699560/sv2a-pet-imaging-in-human-neurodegenerative-diseases
#13
REVIEW
Mahsa Shanaki Bavarsad, Lea T Grinberg
This manuscript presents a thorough review of synaptic vesicle glycoprotein 2A (SV2A) as a biomarker for synaptic integrity using Positron Emission Tomography (PET) in neurodegenerative diseases. Synaptic pathology, characterized by synaptic loss, has been linked to various brain diseases. Therefore, there is a need for a minimally invasive approach to measuring synaptic density in living human patients. Several radiotracers targeting synaptic vesicle protein 2A (SV2A) have been created and effectively adapted for use in human subjects through PET scans...
2024: Frontiers in Aging Neuroscience
https://read.qxmd.com/read/38698221/synaptotagmin-11-facilitates-assembly-of-a-presynaptic-signaling-complex-in-post-golgi-cargo-vesicles
#14
JOURNAL ARTICLE
Luca Trovò, Stylianos Kouvaros, Jochen Schwenk, Diego Fernandez-Fernandez, Thorsten Fritzius, Pascal Dominic Rem, Simon Früh, Martin Gassmann, Bernd Fakler, Josef Bischofberger, Bernhard Bettler
GABAB receptors (GBRs), the G protein-coupled receptors for GABA, regulate synaptic transmission throughout the brain. A main synaptic function of GBRs is the gating of Cav2.2-type Ca2+ channels. However, the cellular compartment where stable GBR/Cav2.2 signaling complexes form remains unknown. In this study, we demonstrate that the vesicular protein synaptotagmin-11 (Syt11) binds to both the auxiliary GBR subunit KCTD16 and Cav2.2 channels. Through these dual interactions, Syt11 recruits GBRs and Cav2.2 channels to post-Golgi vesicles, thus facilitating assembly of GBR/Cav2...
May 2, 2024: EMBO Reports
https://read.qxmd.com/read/38693139/actin-nucleation-promoting-factor-n-wasp-influences-alpha-synuclein-condensates-and-pathology
#15
JOURNAL ARTICLE
Joshua Jackson, Christian Hoffmann, Enzo Scifo, Han Wang, Lena Wischhof, Antonia Piazzesi, Mrityunjoy Mondal, Hanna Shields, Xuesi Zhou, Magali Mondin, Eanna B Ryan, Hermann Döring, Jochen H M Prehn, Klemens Rottner, Gregory Giannone, Pierluigi Nicotera, Dan Ehninger, Dragomir Milovanovic, Daniele Bano
Abnormal intraneuronal accumulation of soluble and insoluble α-synuclein (α-Syn) is one of the main pathological hallmarks of synucleinopathies, such as Parkinson's disease (PD). It has been well documented that the reversible liquid-liquid phase separation of α-Syn can modulate synaptic vesicle condensates at the presynaptic terminals. However, α-Syn can also form liquid-like droplets that may convert into amyloid-enriched hydrogels or fibrillar polymorphs under stressful conditions...
April 30, 2024: Cell Death & Disease
https://read.qxmd.com/read/38692286/%C3%AE-synuclein-pathology-in-drosophila-melanogaster-is-exacerbated-by-haploinsufficiency-of-rop-connecting-stxbp1-encephalopathy-with-%C3%AE-synucleinopathies
#16
JOURNAL ARTICLE
Taro Matsuoka, Hideki Yoshida, Takashi Kasai, Takenori Tozawa, Tomoko Iehara, Tomohiro Chiyonobu
Syntaxin-binding protein 1 (STXBP1) is a presynaptic protein that plays important roles in synaptic vesicle docking and fusion. STXBP1 haploinsufficiency causes STXBP1 encephalopathy (STXBP1-E), which encompasses neurological disturbances including epilepsy, neurodevelopmental disorders, and movement disorders. Most patients with STXBP1-E present with regression and movement disorders in adulthood, highlighting the importance of a deeper understanding of the neurodegenerative aspects of STXBP1-E. An in vitro study proposed an interesting new role of STXBP1 as a molecular chaperone for α-Synuclein (αSyn), a key molecule in the pathogenesis of neurodegenerative disorders...
May 1, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38688542/measuring-presynaptic-calcium-influx-at-the-drosophila-larval-neuromuscular-junction
#17
JOURNAL ARTICLE
Tingting Wang, C Andrew Frank
Synaptic transmission plays a critical role in information processing and storage within the nervous system. The triggering of action potentials activates voltage-gated calcium channels at presynaptic active zones, facilitating the calcium-dependent release of synaptic vesicles. Homeostatic mechanisms are crucial in stabilizing synaptic function. At the Drosophila neuromuscular junction, a compensatory increase in presynaptic neurotransmitter release occurs when postsynaptic glutamate receptor function is pharmacologically or genetically impaired, thereby stabilizing synaptic output...
April 30, 2024: Cold Spring Harbor Protocols
https://read.qxmd.com/read/38688540/measuring-the-readily-releasable-synaptic-vesicle-pool-at-the-drosophila-larval-neuromuscular-junction
#18
JOURNAL ARTICLE
Tingting Wang, C Andrew Frank
Presynaptic homeostatic potentiation (PHP) is a type of homeostatic regulation that stabilizes synaptic output under conditions where postsynaptic receptor function is impaired. PHP manifests as a significant increase in presynaptic neurotransmitter release, compensating for decreased postsynaptic receptor activity and thus maintaining stable excitation levels in postsynaptic cells. Presynaptic neurotransmitter release is calcium-dependent, initiated by calcium influx through voltage-gated calcium channels localized at the presynaptic active zones...
April 30, 2024: Cold Spring Harbor Protocols
https://read.qxmd.com/read/38687446/integrated-proteomics-and-protein-co-expression-network-analysis-identifies-novel-epileptogenic-mechanism-in-mesial-temporal-lobe-epilepsy
#19
JOURNAL ARTICLE
Arpna Srivastava, Priya Rajput, Manjari Tripathi, Poodipedi Sarat Chandra, Ramesh Doddamani, Mehar Chand Sharma, Sanjeev Lalwani, Jyotirmoy Banerjee, Aparna Banerjee Dixit
Over 50 million people worldwide are affected by epilepsy, a common neurological disorder that has a high rate of drug resistance and diverse comorbidities such as progressive cognitive and behavioural disorders, and increased mortality from direct or indirect effects of seizures and therapies. Despite extensive research with animal models and human studies, limited insights have been gained into the mechanisms underlying seizures and epileptogenesis, which has not translated into significant reductions in drug resistance, morbidities, or mortality...
April 30, 2024: Molecular Neurobiology
https://read.qxmd.com/read/38687434/zap70-a-key-gene-identified-by-differential-expression-analysis-for-early-diagnosis-of-fetuses-with-emanuel-syndrome
#20
JOURNAL ARTICLE
Jing Hu, Mengyue Wang, Ruiyao Xiang
Emanuel syndrome is a rare autosomal disorder characterized by microcephaly, heart defects, cleft palate and developmental delay. However, there is a lack of specific prenatal screening for Emanuel syndrome. To screen for early diagnostic marker genes in fetuses with karyotype+der[22]t(11;22)(q23;q11) of Emanuel syndrome. Transcriptome sequencing and clinical trait data of t(11;22)(q23;q11) translocation samples were screened from the GEO database. The differentially expressed genes (DEGs) were screened by principal component analysis of gene expression by R package, and intersections were taken with balanced and unbalanced DEGs...
April 30, 2024: Biochemical Genetics
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