keyword
https://read.qxmd.com/read/38425514/-br-4-f-21-a-unique-molecular-tetrahedral-interhalogen-ion-containing-a-%C3%AE-4-bridging-fluorine-atom-surrounded-by-brf-5-molecules
#21
JOURNAL ARTICLE
Martin Möbs, Tim Graubner, Antti J Karttunen, Florian Kraus
The reaction of [NMe4 ][BrF6 ] with an excess of BrF5 leads to the compound [NMe4 ][Br4 F21 ]·BrF5 . It features molecular [(μ4 -F)(BrF5 )4 ]- anions of tetrahedron-like shape containing central μ4 -bridging F atoms coordinated by four BrF5 molecules. It is the most BrF5 -rich fluoridobromate anion by mass. Quantum-chemical calculations showed that the μ4 -F-Br bonds within the anion are essentially ionic in nature. The compound is the first example where F atoms bridge μ4 -like neither to metal nor to hydrogen atoms...
February 28, 2024: Chemical Science
https://read.qxmd.com/read/38402982/ridge-with-no-tillage-facilitates-microbial-n-2-fixation-associated-with-methane-oxidation-in-rice-soil
#22
JOURNAL ARTICLE
Weiwei Cao, Jun Zhao, Yuanfeng Cai, Yongliang Mo, Jingjing Ma, Guangbin Zhang, Xianjun Jiang, Zhongjun Jia
Aerobic methane-oxidizing bacteria (MOB) play a crucial role in mitigating the greenhouse gas methane emission, particularly prevalent in flooded wetlands. The implementation of ridge with no-tillage practices within a rice-rape rotation system proves effective in overcoming the restrictive redox conditions associated with waterlogging. This approach enhances capillary water availability from furrows, especially during periods of low rainfall, thereby supporting plant growth on the ridges. However, the microbe-mediated accumulation of soil organic carbon and nitrogen remains insufficiently understood under this agricultural practice, particularly concerning methane oxidation, which holds ecological and agricultural significance in the rice fields...
February 23, 2024: Science of the Total Environment
https://read.qxmd.com/read/38399776/identifying-active-rather-than-total-methanotrophs-inhabiting-surface-soil-is-essential-for-the-microbial-prospection-of-gas-reservoirs
#23
JOURNAL ARTICLE
Kewei Xu, Cheng Tao, Lei Gu, Xuying Zheng, Yuanyuan Ma, Zhengfei Yan, Yongge Sun, Yuanfeng Cai, Zhongjun Jia
Methane-oxidizing bacteria (MOB) have long been recognized as an important bioindicator for oil and gas exploration. However, due to their physiological and ecological diversity, the distribution of MOB in different habitats varies widely, making it challenging to authentically reflect the abundance of active MOB in the soil above oil and gas reservoirs using conventional methods. Here, we selected the Puguang gas field of the Sichuan Basin in Southwest China as a model system to study the ecological characteristics of methanotrophs using culture-independent molecular techniques...
February 11, 2024: Microorganisms
https://read.qxmd.com/read/38391577/molecular-analysis-of-carbapenem-and-aminoglycoside-resistance-genes-in-carbapenem-resistant-pseudomonas-aeruginosa-clinical-strains-a-challenge-for-tertiary-care-hospitals
#24
JOURNAL ARTICLE
Aamir Jamal Gondal, Nakhshab Choudhry, Ammara Niaz, Nighat Yasmin
Carbapenem-resistant Pseudomonas aeruginosa ( P. aeruginosa ) strains have become a global threat due to their remarkable capability to survive and disseminate successfully by the acquisition of resistance genes. As a result, the treatment strategies have been severely compromised. Due to the insufficient available data regarding P. aeruginosa resistance from Pakistan, we aimed to investigate the resistance mechanisms of 249 P. aeruginosa strains by antimicrobial susceptibility testing, polymerase chain reaction for the detection of carbapenemases, aminoglycoside resistance genes, extended-spectrum beta-lactamases (ESBLs), sequence typing and plasmid typing...
February 16, 2024: Antibiotics
https://read.qxmd.com/read/38376388/plasmidec-and-gplas2-an-optimized-short-read-approach-to-predict-and-reconstruct-antibiotic-resistance-plasmids-in-escherichia-coli
#25
JOURNAL ARTICLE
Julian A Paganini, Jesse J Kerkvliet, Lisa Vader, Nienke L Plantinga, Rodrigo Meneses, Jukka Corander, Rob J L Willems, Sergio Arredondo-Alonso, Anita C Schürch
Accurate reconstruction of Escherichia coli antibiotic resistance gene (ARG) plasmids from Illumina sequencing data has proven to be a challenge with current bioinformatic tools. In this work, we present an improved method to reconstruct E. coli plasmids using short reads. We developed plasmidEC, an ensemble classifier that identifies plasmid-derived contigs by combining the output of three different binary classification tools. We showed that plasmidEC is especially suited to classify contigs derived from ARG plasmids with a high recall of 0...
February 2024: Microbial Genomics
https://read.qxmd.com/read/38372619/japanese-immigration-in-america-fleeing-riots-escaping-imprisonment-and-assimilating
#26
JOURNAL ARTICLE
Don K Nakayama
When 13-year-old Teruichi Nakayama, my grandfather, came to San Francisco from Osaka in 1906, he was assured of an education in a public school by an 1894 treaty between the United States and Japan that gave the latter most-favored-nation status. In 1906, racist mobs forced a decision by the school board to assign 41 school aged Japanese children, including him, to a segregated school for Asian children in violation of the pact. In 1907, he escaped street violence to work as a migrant laborer on inland farms...
February 19, 2024: American Surgeon
https://read.qxmd.com/read/38361213/extracellular-vesicles-messengers-of-allergic-immune-responses-and-novel-therapeutic-strategy
#27
REVIEW
Christian Möbs, Anna Lena Jung
Extracellular vesicles (EVs) are nanosized particles released by nearly every cell type across all kingdoms of life. As a result, EVs are ubiquitously present in various human body fluids. Composed of a lipid bilayer, EVs encapsulate proteins, nucleic acids, and metabolites, thus playing a crucial role in immunity, for example, by enabling intercellular communication. More recently, there has been increasing evidence that EVs can also act as key regulators of allergic immune responses. Their ability to facilitate cell-to-cell contact and to transport a variety of different biomolecules enables active modulation of both innate and adaptive immune processes associated with allergic reactions...
February 15, 2024: European Journal of Immunology
https://read.qxmd.com/read/38349166/mob-mediated-regulation-of-septation-initiation-network-sin-signaling-is-required-for-echinocandin-induced-hyperseptation-in-aspergillus-fumigatus
#28
JOURNAL ARTICLE
Harrison I Thorn, Xabier Guruceaga, Adela Martin-Vicente, Ashley V Nywening, Jinhong Xie, Wenbo Ge, Jarrod R Fortwendel
Aspergillus fumigatus is a major invasive mold pathogen and the most frequent etiologic agent of invasive aspergillosis. The currently available treatments for invasive aspergillosis are limited in both number and efficacy. Our recent work has uncovered that the β-glucan synthase inhibitors, the echinocandins, are fungicidal against strains of A. fumigatus with defects in septation initiation network (SIN) kinase activity. These drugs are known to be fungistatic against strains with normal septation. Surprisingly, SIN kinase mutant strains also failed to invade lung tissue and were significantly less virulent in immunosuppressed mouse models...
February 13, 2024: MSphere
https://read.qxmd.com/read/38340282/prevalence-of-frailty-in-european-emergency-departments-feed-an-international-flash-mob-study
#29
JOURNAL ARTICLE
(no author information available yet)
INTRODUCTION: Current emergency care systems are not optimized to respond to multiple and complex problems associated with frailty. Services may require reconfiguration to effectively deliver comprehensive frailty care, yet its prevalence and variation are poorly understood. This study primarily determined the prevalence of frailty among older people attending emergency care. METHODS: This cross-sectional study used a flash mob approach to collect observational European emergency care data over a 24-h period (04 July 2023)...
February 10, 2024: European Geriatric Medicine
https://read.qxmd.com/read/38326826/correction-increasing-access-to-screening-for-blood-borne-viruses-and-sexually-transmissible-infections-for-aboriginal-and-torres-strait-islander-australians-evaluation-of-the-deadly-liver-mob-program-s-cascade-of-care-across-nine-sites-in-new-south-wales-australia
#30
Elena Cama, Kim Beadman, Mitch Beadman, Kerri-Anne Smith, Jade Christian, Aunty Clair Jackson, Beverley Tyson, Clayton Anderson, Larissa Smyth, Jennifer Heslop, Gary Gahan, Victor Tawil, Felicity Sheaves, Louise Maher, Julie Page, Donna Tilley, Ann Ryan, Kim Grant, Basil Donovan, Annabelle Stevens, Trevor Slattery, Kate Pearce, Franklin John-Leader, Andrew Walden, Jo Lenton, Margaret Crowley, Carla Treloar
No abstract text is available yet for this article.
February 7, 2024: Harm Reduction Journal
https://read.qxmd.com/read/38324821/the-impacts-of-violence-among-women-in-intimate-relationships-an-integrative-literature-review
#31
JOURNAL ARTICLE
Fabiana Lobo Mota, Margareth Aparecida Santini de Almeida, Dinair Ferreira Machado
The aim is to identify cultural, social and health impacts caused by intimate partner violence (IPV) in homoaffective (MOH) and biaffective (MOB) women. This is an integrative literature review that sought and analyzed studies indexed in the PubMed and Lilacs databases, considering the following languages. The study sought to answer the following research question: "What impacts does IPV bring to MOB and MOH?". Forty two studies were found and after applying the exclusion criteria, 19 went into the final sample...
February 2024: Ciência & Saúde Coletiva
https://read.qxmd.com/read/38323496/unraveling-the-diversity-and-dissemination-dynamics-of-antimicrobial-resistance-genes-in-enterobacteriaceae-plasmids-across-diverse-ecosystems
#32
JOURNAL ARTICLE
Yasmin Neves Vieira Sabino, Mariana Dias Melo, Giarlã Cunha da Silva, Hilario Cuquetto Mantovani
AIM: The objective of this study was to investigate the antimicrobial resistance genes (ARG) in plasmids of Enterobacteriaceae from soil, sewage, and feces of food-producing animals and humans. METHODS AND RESULTS: The plasmid sequences were obtained from the NCBI database. For identification of ARG, CARD and RESFINDER were used. Gene conservation and evolution were investigated using DnaSP v.6. The transfer potential of the plasmids was evaluated using oriTfinder and a MOB-based phylogenetic tree was reconstructed using Fastree...
February 6, 2024: Journal of Applied Microbiology
https://read.qxmd.com/read/38321503/correction-insights-from-the-scale-up-and-implementation-of-the-deadly-liver-mob-program-across-nine-sites-in-new-south-wales-australia-according-to-the-re-aim-framework
#33
Elena Cama, Kim Beadman, Mitch Beadman, Melinda Walker, Carla Treloar
No abstract text is available yet for this article.
February 6, 2024: Harm Reduction Journal
https://read.qxmd.com/read/38313135/synthesis-and-redetermination-of-the-crystal-structure-of-nbf-5
#34
JOURNAL ARTICLE
Martin Möbs, Florian Kraus
Single crystals of NbF5 , niobium(V) fluoride, have been obtained by the reaction of niobium metal in a stream of dilute elemental fluorine at 473 K and subsequent sublimation. The as-obtained bulk phase compound was shown to be pure by powder X-ray diffraction at 293 K and by IR and Raman spectroscopy. A single-crystal X-ray analysis was conducted at 100 K. In comparison to the previously reported structure model [Edwards (1964 ▸). J. Chem. Soc. pp. 3714-3718], the lattice parameters and fractional atom coordinates were determined to much higher precision and individual, anisotropic displacement parameters were refined for all atoms...
December 1, 2023: Acta Crystallographica. Section E, Crystallographic Communications
https://read.qxmd.com/read/38297646/improving-heart-rate-monitoring-in-the-obese-with-time-of-flight-photoplethysmography-tof-ppg-a-quantitative-analysis-of-source-detector-distance-effect
#35
JOURNAL ARTICLE
Elizabeth Badolato, Andrew Little, V N Du Le
Commercial photoplethysmography (PPG) sensors rely on the measurement of continuous-wave diffuse reflection signals (CW-DRS) to monitor heart rate. Using Monte Carlo modeling of light propagation in skin, we quantitatively evaluate the dependence of continuous-wave photoplethysmography (CW-PPG) in commercial wearables on source-detector distance (SDD). Specifically, when SDD increases from 0.5 mm to 3.3 mm, CW-PPG signal increases by roughly 846% for non-obese (NOB) skin and roughly 683% for morbidly obese (MOB) skin...
January 29, 2024: Optics Express
https://read.qxmd.com/read/38286313/manipulating-soil-microbial-community-assembly-by-the-cooperation-of-exogenous-bacteria-and-biochar-for-establishing-an-efficient-and-healthy-ch-4-biofiltration-system
#36
JOURNAL ARTICLE
Rujie Zhang, Qiyong Xu, Zilong Song, Jiang Wu, Huaihai Chen, Xinyue Bai, Ning Wang, Yuke Chen, Dandan Huang
Manipulating the methanotroph (MOB) composition and microbial diversity is a promising strategy to optimize the methane (CH4 ) biofiltration efficiency of an engineered landfill cover soil (LCS) system. Inoculating soil with exogenous MOB-rich bacteria and amending soil with biochar show strong manipulating potential, but how the two stimuli interactively shape the microbial community structure and diversity has not been clarified. Therefore, three types of soils with active CH4 activities, including paddy soil, river wetland soil, and LCS were selected for enriching MOB-dominated communities (abbreviated as B_PS, B_RWS, and B_LCS, respectively)...
January 27, 2024: Chemosphere
https://read.qxmd.com/read/38286151/assessing-the-performance-of-farm-soil-based-and-hybrid-biofilters-for-methane-abatement
#37
JOURNAL ARTICLE
Surinder Saggar, Thilak Palmada, Neha Jha, Kamal Adhikari
Mitigating methane (CH4 ) emissions using methanotrophs (methane-oxidizing bacteria, MOB), is a simple, energy efficient and cheap technology. The abundance and distribution of MOB in the environmental samples is critical for efficient removal of emitted CH4 from any source. This study evaluated the performance of farm soils without and with cheap, easily accessible bulking materials as sustainable hybrid biofilter media. Soil-only biofilters removed up to 865 ± 19 g CH4 m-3 d-1 with well-drained organic carbon-rich soils compared with 264 ± 14 g CH4 m-3 d-1 for poorly drained soil...
January 29, 2024: Environmental Technology
https://read.qxmd.com/read/38281061/seasonal-dynamics-of-the-microbial-methane-filter-in-the-water-column-of-a-eutrophic-coastal-basin
#38
JOURNAL ARTICLE
Jessica Venetz, Olga M Żygadłowska, Nicky Dotsios, Anna J Wallenius, Niels A G M van Helmond, Wytze K Lenstra, Robin Klomp, Caroline P Slomp, Mike S M Jetten, Annelies J Veraart
In coastal waters, methane-oxidizing bacteria (MOB) can form a methane biofilter and mitigate methane emissions. The metabolism of these MOB is versatile, and the resilience to changing oxygen concentrations is potentially high. It is still unclear how seasonal changes in oxygen availability and water column chemistry affect the functioning of the methane biofilter, and MOB community composition. Here, we determined water column methane and oxygen depth profiles, the methanotrophic community structure, methane oxidation potential, and water-air methane fluxes of a eutrophic marine basin during summer stratification and in the mixed water in spring and autumn...
January 27, 2024: FEMS Microbiology Ecology
https://read.qxmd.com/read/38271704/host-transcriptional-meta-signatures-reveal-diagnostic-biomarkers-for-plasmodium-falciparum-malaria
#39
JOURNAL ARTICLE
Nágila Isleide Silva, Pedro Felipe Loyola Souza, Bárbara Fernandes Silva, Simone Gonçalves Fonseca, Luiz Gustavo Gardinassi
BACKGROUND: Transcriptomics has been used to evaluate immune responses during malaria in diverse cohorts worldwide. However, the high heterogeneity of cohorts and poor generalization of transcriptional signatures reported in each study limit their potential clinical applications. METHODS: We compiled 28 public datasets containing 1,556 whole blood or peripheral blood mononuclear cells (PBMC) transcriptome samples. We estimated effect sizes with Hedges´ g and DerSimonian-Laird random effects model for meta-analyses of uncomplicated malaria...
January 25, 2024: Journal of Infectious Diseases
https://read.qxmd.com/read/38265722/a-novel-system-to-selective-tagging-of-sinorhizobium-fredii-symbiotic-plasmids
#40
JOURNAL ARTICLE
Ana María Cutiño, María Del Carmen Sánchez-Aguilar, José Enrique Ruiz-Sáinz, María Del Rosario Espuny, Francisco Javier Ollero, Carlos Medina
Conventional systems used to tag and transfer symbiotic plasmids (pSyms) of rhizobial strains are based in mutagenesis with transposons. In those processes, numerous clones must be analyzed to find one of them with the transposon inserted in the pSym. Following this strategy, the insertion might interrupt a gene that can affect the symbiotic phenotype of the bacteria tagged. Here, we have developed a new system based in homologous recombination that generates Sinorhizobium fredii strains with pSyms tagged by the insertion of a suicide vector which harbor a truncated copy of S...
2024: Methods in Molecular Biology
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