keyword
https://read.qxmd.com/read/38597687/effect-of-covalence-and-degree-of-cation-order-on-the-luminous-efficacy-of-mn-4-luminescence-in-the-double-perovskites-ba-2-b-tao-6-b-y-lu-sc
#21
JOURNAL ARTICLE
Alok M Srivastava, Mikhail G Brik, Chong-Geng Ma, William W Beers, William E Cohen, Michal Piasecki
The spectroscopic properties of the Mn4+ ion are investigated in the series of isostructural double perovskite compounds, Ba2 B TaO6 ( B = Y, Lu, Sc). A comparison of these properties highlights the influence of covalent bonding within the perovskite framework and the degree of order between the B3+ -Ta cations on the energy and intensity of the Mn4+2 E → 4 A2 emission transition (R-line). These two parameters of the emission spectrum are of importance for practical application since they determine the phosphor luminous efficacy...
April 10, 2024: Journal of Physical Chemistry Letters
https://read.qxmd.com/read/38595814/prostate-cancer-research-tools-cell-types-and-molecular-targets
#22
REVIEW
Alvin Y Liu
Multiple cancer cell types are found in prostate tumors. They are either luminal-like adenocarcinoma or less luminal-like and more stem-like non-adenocarcinoma and small cell carcinoma. These types are lineage related through differentiation. Loss of cancer differentiation from luminal-like to stem-like is mediated by the activation of stem cell transcription factors (scTF) such as LIN28A, NANOG, POU5F1 and SOX2. scTF expression leads to down-regulation of β2-microglobulin (B2M). Thus, cancer cells can change from the <mml:math xmlns:mml="https://www...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38593584/stroma-areactive-invasion-front-areas-sarifa-a-novel-histopathologic-biomarker-in-colorectal-cancer-patients-and-its-association-with-the-luminal-tumour-proportion
#23
JOURNAL ARTICLE
N G Reitsam, B Grosser, J S Enke, W Mueller, A Westwood, N P West, P Quirke, B Märkl, H I Grabsch
BACKGROUND: Stroma AReactive Invasion Front Areas (SARIFA) is a novel prognostic histopathologic biomarker measured at the invasive front in haematoxylin & eosin (H&E) stained colon and gastric cancer resection specimens. The aim of the current study was to validate the prognostic relevance of SARIFA-status in colorectal cancer (CRC) patients and investigate its association with the luminal proportion of tumour (PoT). METHODS: We established the SARIFA-status in 164 CRC resection specimens...
April 8, 2024: Translational Oncology
https://read.qxmd.com/read/38591846/znf397-deficiency-triggers-tet2-driven-lineage-plasticity-and-ar-targeted-therapy-resistance-in-prostate-cancer
#24
JOURNAL ARTICLE
Yaru Xu, Yuqiu Yang, Zhaoning Wang, Martin Sjostrom, Yuyin Jiang, Yitao Tang, Siyuan Cheng, Su Deng, Choushi Wang, Julisa Gonzalez, Nickolas A Johnson, Xiang Li, Xiaoling Li, Lauren A Metang, Atreyi Mukherji, Quanhui Xu, Carla Rodriguez Tirado, Garrett Wainwright, Xinzhe Yu, Spencer Barnes, Mia Hofstad, Yu Chen, Hong Zhu, Ariella B Hanker, Ganesh V Raj, Guanghui Zhu, Housheng Hansen He, Zhao Wang, Carlos L Arteaga, Han Liang, Felix Y Feng, Yunguan Wang, Tao Wang, Ping Mu
Cancer cells exhibit phenotypical plasticity and epigenetic reprogramming, which allows them to evade lineage-dependent targeted treatments by adopting lineage plasticity. The underlying mechanisms by which cancer cells exploit the epigenetic regulatory machinery to acquire lineage plasticity and therapy resistance remain poorly understood. We identified Zinc Finger Protein 397 (ZNF397) as a bona fide coactivator of the androgen receptor (AR), essential for the transcriptional program governing AR-driven luminal lineage...
April 8, 2024: Cancer Discovery
https://read.qxmd.com/read/38587101/pyrazolate-bridged-nhc-cyclometalated-pt-2-complexes-and-pt-2-ag-pph-3-clusters-in-electroluminescent-devices
#25
JOURNAL ARTICLE
Jorge Roy, Michele Forzatti, Lorenzo Arnal, Antonio Martín, Sara Fuertes, Daniel Tordera, Violeta Sicilia
The ionic transition metal complexes (iTMCs) [{Pt(C∧ C*)(μ-Rpz)}2 Ag(PPh3 )]X (HC∧ C* = 1-(4-(ethoxycarbonyl)phenyl)-3-methyl-1 H -imidazole-2-ylidene, X = ClO4 /PF6; Rpz = pz 1 a /2a , 4-Mepz 1 b /2b , and 3,5-dppz 1 c /2c ) were prepared from the neutral [{Pt(C∧ C*)(μ-Rpz)}2 ] (Rpz = pz A , 4-Mepz B , and 3,5-dppz C ) and fully characterized. The "Ag(PPh3 )" fragment is in between the two square-planar platinum units in an "open book" disposition and bonded through two Pt-Ag donor-acceptor bonds, as shown by X-ray diffraction (dPt-Ag ∼ 2...
April 8, 2024: Inorganic Chemistry
https://read.qxmd.com/read/38587073/molecular-subtyping-improves-breast-cancer-diagnosis-in-the-copenhagen-breast-cancer-genomics-study
#26
JOURNAL ARTICLE
Tobias Berg, Maj-Britt Jensen, Alan Celik, Maj-Lis Talman, Maria Anna Misiakou, Ann Søegaard Knoop, Finn Cilius Nielsen, Bent Ejlertsen, Maria Rossing
BACKGROUNDIntrinsic molecular subtypes define distinct biological breast cancers and can be used to further improve diagnosis and risk allocation.METHODSThe Copenhagen Breast Cancer Genomics Study (CBCGS) prospectively included women diagnosed with breast cancer at Rigshospitalet from 2014 to 2021. Eligible patients were females with a primary invasive breast cancer (T1c, if N0M0; otherwise, any T, any N, or any M stage) and no prior malignancy. All patients underwent molecular profiling with the CIT256 and PAM50 molecular profile...
April 8, 2024: JCI Insight
https://read.qxmd.com/read/38585820/omicsfootprint-a-framework-to-integrate-and-interpret-multi-omics-data-using-circular-images-and-deep-neural-networks
#27
Xiaojia Tang, Naresh Prodduturi, Kevin J Thompson, Richard Weinshilboum, Ciara C O'Sullivan, Judy C Boughey, Hamid R Tizhoosh, Eric W Klee, Liewei Wang, Matthew P Goetz, Vera Suman, Krishna R Kalari
BACKGROUND: The integration and interpretation of multi-omics data are crucial in elucidating the pathophysiological mechanisms of complex diseases. While Deep Neural Networks (DNNs) and Graph Neural Networks (GNNs) have revolutionized the analysis of such data in cancer and neurodegenerative diseases, there remains a critical need for improved multi-omics analytic methodologies. METHODS: We developed OmicsFootPrint, a novel framework for transforming multi-omics data into two-dimensional circular images for each sample, enabling intuitive representation and analysis...
March 27, 2024: bioRxiv
https://read.qxmd.com/read/38581481/genomic-ancestry-and-cancer-among-latin-americans
#28
JOURNAL ARTICLE
Alejandro Ruíz-Patiño, Leonardo Rojas, Jairo Zuluaga, Oscar Arrieta, Luis Corrales, Claudio Martín, Sandra Franco, Luis Raez, Christian Rolfo, Natalia Sánchez, Andrés Felipe Cardona
Latin American populations, characterized by intricate admixture patterns resulting from the intermingling of ancestries from European, Native American (NA) Asian, and African ancestries which result in a vast and complex genetic landscape, harboring unique combinations of novel variants. This genetic diversity not only poses challenges in traditional population genetics methods but also opens avenues for a deeper understanding of its implications in health. In cancer, the interplay between genetic ancestry, lifestyle factors, and healthcare disparities adds a layer of complexity to the varying incidence and mortality rates observed across different Latin American subpopulations...
April 6, 2024: Clinical & Translational Oncology
https://read.qxmd.com/read/38579922/autophagic-lysosomal-damage-induced-by-swainsonine-is-protected-by-trehalose-through-activation-of-tfeb-regulated-pathway-in-renal-tubular-epithelial-cells
#29
JOURNAL ARTICLE
Shuhang Zhang, Hai Yin, Yiqingqing Zhang, Yanli Zhu, Xueyao Zhu, Wenting Zhu, Lihui Tang, Yiling Liu, Kexin Wu, Baoyu Zhao, Yanan Tian, Hao Lu
Swainsonine (SW) is the main toxic component of locoweed. Previous studies have shown that kidney damage is an early pathologic change in locoweed poisoning in animals. Trehalose induces autophagy and alleviates lysosomal damage, while its protective effect and mechanism against the toxic injury induced by SW is not clear. Based on the published literature, we hypothesize that transcription factor EB(TFEB) -regulated is targeted by SW and activating TFEB by trehalose would reverse the toxic effects. In this study, we investigate the mechanism of protective effects of trehalose using renal tubular epithelial cells...
April 3, 2024: Chemico-biological Interactions
https://read.qxmd.com/read/38569880/tp53-associated-early-breast-cancer-new-observations-from-a-large-cohort
#30
JOURNAL ARTICLE
Renata L Sandoval, Michele Bottosso, Li Tianyu, Natalia Polidorio, Brittany L Bychkovsky, Benjamin Verret, Alessandra Gennari, Sophie Cahill, Maria Isabel Achatz, Olivier Caron, Marion Imbert-Bouteille, Catherine Noguès, Kara N Mawell, Cristina Fortuno, Amanda B Spurdle, Nabihah Tayob, Fabrice Andre, Judy E Garber
BACKGROUND: A large well-annotated recent international cohort of Li-Fraumeni (LFS) patients with early-stage breast cancer (BC) was examined for shared features. METHODS: This multicentre cohort study included females with a germline TP53 pathogenic or likely pathogenic variant and nonmetastatic BC diagnosed between 2002-2022. Clinical and genetic data were obtained from institutional registries and clinical charts. Descriptive statistics were utilized to summarize proportions and differences were assessed by Chi square or Wilcoxon rank sum tests...
April 3, 2024: Journal of the National Cancer Institute
https://read.qxmd.com/read/38563613/comparative-ultrastructure-of-the-olfactory-system-in-the-east-african-root-rat-tachyoryctes-splendens-and-the-naked-mole-rat-heterocephalus-glaber
#31
JOURNAL ARTICLE
P N Onyono, B M Kavoi, S G Kiama, A N Makanya
The ultrastructure of the olfactory system of most fossorial rodents remains largely unexplored. This study sought to investigate the functional structure of the olfactory mucosa and olfactory bulb of two species of fossorial rodents that have distinct behaviour and ecology, the East African root rat (RR) and the naked mole rat (NMR). Transmission electron microscopy and scanning electron microscopy were employed. The basic ultrastructural design of the olfactory system of the two species was largely comparable...
May 2024: Anatomia, Histologia, Embryologia
https://read.qxmd.com/read/38562809/mcam-stabilizes-luminal-progenitor-breast-cancer-phenotypes-via-ck2-control-and-src-akt-stat3-attenuation
#32
Ozlen Balcioglu, Brooke L Gates, David W Freeman, Berhane M Hagos, Elnaz Mirzaei Mehrabad, David Ayala-Talavera, Benjamin T Spike
UNLABELLED: Breast cancers are categorized into subtypes with distinctive therapeutic vulnerabilities and prognoses based on their expression of clinically targetable receptors and gene expression patterns mimicking different cell types of the normal gland. Here, we tested the role of Mcam in breast cancer cell state control and tumorigenicity in a luminal progenitor-like murine tumor cell line (Py230) that exhibits lineage and tumor subtype plasticity. Mcam knockdown Py230 cells show augmented Stat3 and Pi3K/Akt activation associated with a lineage state switch away from a hormone-sensing/luminal progenitor state toward alveolar and basal cell related phenotypes that were refractory to growth inhibition by the anti-estrogen therapeutic, tamoxifen...
March 20, 2024: bioRxiv
https://read.qxmd.com/read/38559258/investigating-the-role-of-thrombosis-fenestration-and-false-lumen-orbital-orientation-in-the-hemodynamics-of-type-b-aortic-dissection
#33
Joseph C E Messou, Kelly Yeung, Eric Sudbrook, Jackie Zhang, Shahab Toursavadkohi, Areck A Ucuzian, Eleonora Tubaldi
While much about the fundamental mechanisms behind the initiation and progression of Type B aortic dissection (TBAD) is still unknown, predictive models based on patient-specific computational fluid dynamics (CFD) can help in risk stratification and optimal clinical decision-making. Aiming at the development of personalized treatment, CFD simulations can be leveraged to investigate the interplay between complex aortic flow patterns and anatomical features. In this study, the hemodynamics of false lumen thrombosis, a large fenestration, and the orbital orientation of the false lumen is studied through image-based CFD simulations on three TBAD patient-specific geometries...
March 15, 2024: Research Square
https://read.qxmd.com/read/38555225/combination-of-dce-mri-and-nme-dwi-via-deep-neural-network-for-predicting-breast-cancer-molecular-subtypes
#34
JOURNAL ARTICLE
Zhi-Chang Ba, Hong-Xia Zhang, Ao-Yu Liu, Xin-Xiang Zhou, Lu Liu, Xin-Yi Wang, Abiyasi Nanding, Xi-Qiao Sang, Zi-Xiang Kuai
BACKGROUND: To explore whether the combination of dynamic contrast-enhanced (DCE) magnetic resonance imaging (MRI) and nonmono-exponential (NME) model-based diffusion-weighted imaging (DWI) via deep neural network (DNN) can improve the prediction of breast cancer molecular subtypes compared to either imaging technique used alone. PATIENTS AND METHODS: This prospective study examined 480 breast cancers in 475 patients undergoing DCE-MRI and NME-DWI at 3.0 T. Breast cancers were classified as follows: human epidermal growth factor receptor 2 enriched (HER2-enriched), luminal A, luminal B (HER2-), luminal B (HER2+), and triple-negative subtypes...
March 13, 2024: Clinical Breast Cancer
https://read.qxmd.com/read/38546612/tumor-intrinsic-subtypes-and-gene-expression-signatures-in-early-stage-erbb2-her2-positive-breast-cancer-a-pooled-analysis-of-calgb-40601-neoaltto-and-nsabp-b-41-trials
#35
JOURNAL ARTICLE
Aranzazu Fernandez-Martinez, Mattia Rediti, Gong Tang, Tomás Pascual, Katherine A Hoadley, David Venet, Naim U Rashid, Patricia A Spears, Md N Islam, Sarra El-Abed, Judith Bliss, Matteo Lambertini, Serena Di Cosimo, Jens Huobe, David Goerlitz, Rong Hu, Peter C Lucas, Sandra M Swain, Christos Sotiriou, Charles M Perou, Lisa A Carey
IMPORTANCE: Biologic features may affect pathologic complete response (pCR) and event-free survival (EFS) after neoadjuvant chemotherapy plus ERBB2/HER2 blockade in ERBB2/HER2-positive early breast cancer (EBC). OBJECTIVE: To define the quantitative association between pCR and EFS by intrinsic subtype and by other gene expression signatures in a pooled analysis of 3 phase 3 trials: CALGB 40601, NeoALTTO, and NSABP B-41. DESIGN, SETTING, AND PARTICIPANTS: In this retrospective pooled analysis, 1289 patients with EBC received chemotherapy plus either trastuzumab, lapatinib, or the combination, with a combined median follow-up of 5...
March 28, 2024: JAMA Oncology
https://read.qxmd.com/read/38539421/clinicopathological-and-genomic-identification-of-breast-cancers-with-no-impact-on-mortality
#36
JOURNAL ARTICLE
Salvador Gámez-Casado, Lourdes Rodríguez-Pérez, Cristina Bandera-López, Andrés Mesas-Ruiz, Alicia Campini-Bermejo, Marta Bernal-Gómez, Manuel Zalabardo-Aguilar, Julio Calvete-Candenas, Gala Martínez-Bernal, Lidia Atienza-Cuevas, Marcial García-Rojo, Encarnación Benítez-Rodríguez, Bella Pajares-Hachero, María José Bermejo-Pérez, José M Baena-Cañada
BACKGROUND: Implementing mammogram screening means that clinicians are seeing many breast cancers that will never develop metastases. The purpose of this study was to identify subgroups of breast cancer patients who did not present events related to long-term breast cancer mortality, taking into account diagnosis at breast screening, absence of palpability and axillary involvement, and genomic analysis with PAM50. PATIENTS AND METHODS: To identify them, a retrospective observational study was carried out selecting patients without any palpable tumor and without axillary involvement, and a genomic analysis was performed with PAM50...
March 7, 2024: Cancers
https://read.qxmd.com/read/38534461/estrogen-and-progesterone-receptors-are-dysregulated-at-the-bph-5-mouse-preeclamptic-like-maternal-fetal-interface
#37
JOURNAL ARTICLE
Viviane C L Gomes, Bryce M Gilbert, Carolina Bernal, Kassandra R Crissman, Jenny L Sones
The etiopathogenesis of preeclampsia, a leading hypertensive disorder of pregnancy, has been proposed to involve an abnormal circulating sex hormone profile and misexpression of placental estrogen and progesterone receptors (ER and PR, respectively). However, existing research is vastly confined to third trimester preeclamptic placentas. Consequently, the placental-uterine molecular crosstalk and the dynamic ER and PR expression pattern in the peri-conception period remain overlooked. Herein, our goal was to use the BPH/5 mouse to elucidate pre-pregnancy and early gestation Er and Pr dynamics in a preeclamptic-like uterus...
March 16, 2024: Biology
https://read.qxmd.com/read/38531778/metabolic-pathways-of-glucose-and-fructose-ii-spatiotemporal-expression-of-genes-involved-in-synthesis-and-transport-of-lactate-in-ovine-conceptuses
#38
JOURNAL ARTICLE
Robyn M Moses, Claire Stenhouse, Katherine M Halloran, Nirvay Sah, Makenzie G Newton, Emily C Hoskins, Shannon E Washburn, Gregory A Johnson, Guoyao Wu, Fuller W Bazer
Lactate, an abundant molecule in fetal fluids and blood of mammalian species is often overlooked as a metabolic waste product generated during pregnancy. Most of the glucose and fructose consumed by ovine conceptuses is converted to lactate, but proteins involved in lactate metabolism and transport have not been investigated. This study characterized total lactate produced by ovine conceptuses throughout gestation, as well as expression of mRNAs and proteins involved in lactate metabolism. Lactate increased in abundance in the uterine lumen during the preimplantation period and was more abundant than pyruvate...
March 26, 2024: Biology of Reproduction
https://read.qxmd.com/read/38531147/mob-cbam-a-dual-channel-attention-based-deep-learning-generalizable-model-for-breast-cancer-molecular-subtypes-prediction-using-mammograms
#39
JOURNAL ARTICLE
Iqra Nissar, Shahzad Alam, Sarfaraz Masood, Mohammad Kashif
BACKGROUND AND OBJECTIVE: Deep Learning models have emerged as a significant tool in generating efficient solutions for complex problems including cancer detection, as they can analyze large amounts of data with high efficiency and performance. Recent medical studies highlight the significance of molecular subtype detection in breast cancer, aiding the development of personalized treatment plans as different subtypes of cancer respond better to different therapies. METHODS: In this work, we propose a novel lightweight dual-channel attention-based deep learning model MOB-CBAM that utilizes the backbone of MobileNet-V3 architecture with a Convolutional Block Attention Module to make highly accurate and precise predictions about breast cancer...
March 10, 2024: Computer Methods and Programs in Biomedicine
https://read.qxmd.com/read/38530051/vessel-and-airway-characteristics-in-one-year-ct-defined-rapid-emphysema-progression-spiromics
#40
JOURNAL ARTICLE
Sarah E Gerard, Timothy M Dougherty, Prashant Nagpal, Dakai Jin, MeiLan K Han, John D Newell, Punam K Saha, Alejandro P Comellas, Christopher B Cooper, David Couper, Spyridon Fortis, Junfeng Guo, Nadia N Hansel, Richard E Kanner, Ella A Kazeroni, Fernando J Martinez, Amin Motahari, Robert Paine Iii, Stephen Rennard, Joyce D Schroeder, Prescott G Woodruff, R Graham Barr, Benjamin M Smith, Eric A Hoffman
Rationale: Rates of emphysema progression vary in chronic obstructive pulmonary disease (COPD), and the relationship with vascular and airway pathophysiology remain unclear. Objective: We sought to determine if indices of peripheral (segmental and beyond) pulmonary arterial (PA) dilation measured via computed tomography (CT) are associated with a 1-year index of emphysema (EI: %voxels<-950HU) progression. Methods: 599 GOLD 0-3 former and never-smokers were evaluated from the SubPopulations and InterMediate Outcome Measures in COPD Study (SPIROMICS) cohort: rapid-emphysema-progressors (RP, n=188; 1-year ΔEI>1%), non-progressors (NP, n=301; 1-year ΔEI±0...
March 26, 2024: Annals of the American Thoracic Society
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