keyword
https://read.qxmd.com/read/38728993/unveiling-hoxb7-as-a-novel-diagnostic-and-prognostic-biomarker-through-pan-cancer-computer-screening
#1
JOURNAL ARTICLE
Cong Li, Xulong Mao, Lanlan Song, Jueqi Sheng, Lehe Yang, Xiaoying Huang, Liangxing Wang
We attempted to investigate the role of HOXB7 in tumor progression and evolution by means of an extensive computer screening analysis of various cancer types. We performed univariate Cox regression and Kaplan-Meier survival analyses to assess the impact of HOXB7 on overall survival (OS), disease-specific survival (DSS), and progression-free interval (PFI) in different types of cancer. Furthermore, we examined the relationship between HOXB7 and several clinical features: tumor microenvironment, immune regulatory genes, immune checkpoints, tumor mutational burden (TMB), and microsatellite instability (MSI)...
May 7, 2024: Computers in Biology and Medicine
https://read.qxmd.com/read/38724606/the-prognostic-significance-and-potential-mechanism-of-dbf4-zinc-finger-in-hepatocellular-carcinoma
#2
JOURNAL ARTICLE
Zhongkai Wu, Lilong Zhang, Xinyi Li, Li Liu, Tianrui Kuang, Zhendong Qiu, Wenhong Deng, Weixing Wang
DBF4 zinc finger (DBF4) is a critical component involved in DNA replication and cell proliferation. It acts as a positive regulator of the cell division cycle 7 kinase. In this study, our investigation encompassed the impact of DBF4 on hepatocellular carcinoma (HCC) progression and delved into the potential mechanisms. We utilized open-access databases like TCGA and GEO to analyze the association between DBF4 and 33 different tumor types. We also conducted immunohistochemistry experiments to validate the expression of DBF4 in HCC, STAD, COAD, READ, PAAD, and LGG...
May 9, 2024: Scientific Reports
https://read.qxmd.com/read/38723282/patellofemoral-instability-part-ii-surgical-treatment
#3
JOURNAL ARTICLE
Mitchell Bernstein, Isabella Bozzo, J Patrick Park, Thierry Pauyo
Treatment of patellofemoral instability in skeletally mature patients remains an important area of clinical and research interest. Both nonsurgical and surgical interventions are used to treat the underlying causes. Surgical management is the mainstay of treatment of recurrent PFI that fails nonsurgical treatment, and it is broadly classified into bony and soft-tissue procedures. Proximal bony procedures include femoral trochleoplasty, derotational osteotomies, and coronal alignment correction of the femur...
May 8, 2024: Journal of the American Academy of Orthopaedic Surgeons
https://read.qxmd.com/read/38701871/spatiotemporal-models-of-dengue-epidemiology-in-the-philippines-integrating-remote-sensing-and-interpretable-machine-learning
#4
JOURNAL ARTICLE
Don Enrico Buebos-Esteve, Nikki Heherson A Dagamac
Previous dengue epidemiological analyses have been limited in spatiotemporal extent or covariate dimensions, the latter neglecting the multifactorial nature of dengue. These constraints, caused by rigid and traditional statistical tools which collapse amidst 'Big Data', prompt interpretable machine-learning (iML) approaches. Predicting dengue incidence and mortality in the Philippines, a data-limited yet high-burden country, the mlr3 universe of R packages was used to build and optimize ML models based on remotely sensed provincial and dekadal 3 NDVI and 9 rainfall features from 2016-2020...
May 1, 2024: Acta Tropica
https://read.qxmd.com/read/38691869/structure-sparing-resection-for-the-management-of-cervical-chordomas-a-retrospective-institutional-series
#5
JOURNAL ARTICLE
Adam S Levy, Aria M Jamshidi, Meredith C Costello, Allan D Levi
OBJECTIVE: Chordomas are a rare and relatively slow-growing malignancy of notochordal origin with a nearly 50% recurrence rate. Chordomas of the cervical spine are particularly challenging tumors given surrounding vital anatomical structures. Although standard in other areas of the spine, en bloc resection of cervical chordomas is exceedingly difficult and carries the risk of significant postoperative morbidity. Here, the authors present their institutional experience with 13 patients treated with a structure-sparing radical resection and adjuvant radiation for cervical chordomas...
May 2024: Neurosurgical Focus
https://read.qxmd.com/read/38682862/redesigning-the-kinetics-of-lysozyme-amyloid-aggregation-by-cephalosporin-molecules
#6
JOURNAL ARTICLE
Shivani A Muthu, Afnaan Qureshi, Rahul Sharma, Ishita Bisaria, Suhel Parvez, Sonam Grover, Basir Ahmad
In lysozyme amyloidosis, fibrillar aggregates of lysozyme are associated with severe renal, hepatic, and gastrointestinal manifestations, with no definite therapy. Current drugs are now being tested in amyloidosis clinical trials as aggregation inhibitors to mitigate disease progression. The tetracycline group among antimicrobials in use is in phase II of clinical trials, whereas some macrolides and cephalosporins have shown neuroprotection. In the present study, two cephalosporins, ceftazidime (CZD) and cefotaxime (CXM), and a glycopeptide, vancomycin (VNC), are evaluated for inhibition of amyloid aggregation of hen egg white lysozyme (HEWL) under two conditions (i) 4 M guanidine hydrochloride (GuHCl) at pH 6...
April 29, 2024: Journal of Biomolecular Structure & Dynamics
https://read.qxmd.com/read/38682000/chromatin-accessibility-profiling-reveals-that-human-fibroblasts-respond-to-mechanical-stimulation-in-a-cell-specific-manner
#7
JOURNAL ARTICLE
Niall J Logan, Krystyna L Broda, Nikolaos Pantelireis, Greg Williams, Claire A Higgins
Fibroblasts in the skin are highly heterogeneous, both in vivo and in vitro. One difference between follicular (dermal papilla fibroblasts [DP]) and interfollicular fibroblasts (papillary fibroblasts [PFi]) in vitro is their ability to differentiate in response to osteogenic media (OM), or mechanical stimulation. Here, we asked whether differences in the ability of DP and PFi to respond to differentiation stimuli are due to differences in chromatin accessibility. We performed chromatin accessibility and transcriptional profiling of DP and PFi in human skin, which arise from a common progenitor during development, yet display distinct characteristics in adult tissue and in vitro...
May 2024: JBMR Plus
https://read.qxmd.com/read/38664709/outcomes-of-surgical-treatment-of-patellar-instability-in-children-with-down-syndrome
#8
JOURNAL ARTICLE
Assem Zein, Alaa Zenhom Mahmoud Hassan, Amr Mohamed Soliman, Mohamed Mohamed Azmy Mohamed
BACKGROUND: patellar instability is a relatively frequent musculoskeletal disorder in children with Down syndrome (DS). However, such a condition has seldom been studied in the literature, even less its surgical treatment. Different techniques have been offered for this condition; the evidence for surgical options is scarce and primarily based on case reports or case series with few patients and heterogeneous techniques. Given this background, we aimed to evaluate the outcomes of a uniform kind of surgical procedure for such a condition that combined lateral soft tissue release, medial patellofemoral ligament (MPFL) reconstruction (using a partial-thickness quadriceps tendon autograft), the Roux-Goldthwait procedure, and V-Y quadricepsplasty (if needed)...
April 25, 2024: Journal of Orthopaedic Surgery and Research
https://read.qxmd.com/read/38661034/biophysical-evidence-for-the-amyloid-formation-of-a-recombinant-rab2-isoform-of-leishmania-donovani
#9
JOURNAL ARTICLE
Roshanara, Shivani A Muthu, Gulafsha, Rati Tandon, Angamuthu Selvapandiyan, Basir Ahmad
BACKGROUND: The most fatal form of Visceral leishmaniasis or kala-azar is caused by the intracellular protozoan parasite Leishmania donovani. The life cycle and the infection pathway of the parasite are regulated by the small GTPase family of Rab proteins. The involvement of Rab proteins in neurodegenerative amyloidosis is implicated in protein misfolding, secretion abnormalities and dysregulation. The inter and intra-cellular shuttlings of Rab proteins are proposed to be aggregation-prone...
April 24, 2024: Protein and Peptide Letters
https://read.qxmd.com/read/38657154/allograft-reconstruction-of-the-medial-patellofemoral-complex-in-skeletally-immature-patients-a-technical-note
#10
JOURNAL ARTICLE
J Masquijo
Patellofemoral instability (PFI) is a common disorder in children and adolescents. Surgical stabilization of the patella poses challenges in skeletally immature patients due to anatomical peculiarities at this stage, leading to the absence of an established standard reconstruction technique. Recently, there has been a notable interest in the medial patellofemoral complex (MPFC), encompassing the medial patellofemoral ligament (MPFL) and the medial quadriceps tendon femoral ligament (MQTFL), owing to their role in restricting lateral patellar displacement...
2024: Acta Ortopédica Mexicana
https://read.qxmd.com/read/38651072/downregulation-of-nat1-expression-is-associated-with-poor-prognosis-and-immune-infiltration-in-coad
#11
JOURNAL ARTICLE
Houxi Xu, Hongqun Zhang, Songxian Sun, Jingyuan Zhang, Jiege Huo, Chunxiang Zhou
BACKGROUND: An increasing corpus of evidence has identified the involvement of N-acetyltransferase 1 (NAT1), a member of the NAT family, in the progression of various cancers. However, the specific function of NAT1 in colon cancer (COAD) remains elusive. This study aims to decip her the role of NAT1 in COAD and its associated mechanisms. METHODS: The Tumor Immunity Evaluation Resource (TIMER), The Cancer Genome Atlas (TCGA), and the Gene Expression Omnibus (GEO) databases were employed to assess the NAT1 expression level in COAD...
2024: Pharmacogenomics and Personalized Medicine
https://read.qxmd.com/read/38647264/evaluation-of-a-multiagent-chemotherapy-protocol-combining-vincristine-cyclophosphamide-mitoxantrone-and-prednisolone-cmop-for-treatment-of-feline-intermediate-large-cell-lymphoma
#12
JOURNAL ARTICLE
Jade Webster, Katie A McNaught, Joanna S Morris
OBJECTIVES: The aim of this study was to determine response rates, median progression-free intervals (PFIs) and median survival times (MSTs) for cats with intermediate-large cell lymphoma treated with a vincristine, cyclophosphamide, mitoxantrone and prednisolone (CMOP) protocol. A secondary objective was to determine the tolerability of mitoxantrone used within this multiagent protocol. METHODS: The medical records of 31 cats treated at a single institution between 2009 and 2022 were reviewed to identify suitable cases...
April 2024: Journal of Feline Medicine and Surgery
https://read.qxmd.com/read/38639913/formal-wellness-training-of-academic-radiology-leaders-improves-work-life-conflict
#13
JOURNAL ARTICLE
Jay R Parikh, Katelyn J Cavanaugh
OBJECTIVE: To investigate the effect of formal leadership training of academic radiology leaders within an academic center on their own burnout and professional fulfillment. METHODS: The study cohort was academic radiology leaders within one of the largest academic organizations of academic radiologists within the United States. All academic radiology leaders within the organization were electronically mailed a weblink to a confidential IRB-approved survey in April 2021...
April 19, 2024: European Radiology
https://read.qxmd.com/read/38630537/set7-methyltransferase-and-phenotypic-switch-in-diabetic-glomerular-endothelial-cells
#14
JOURNAL ARTICLE
Scott Maxwell, Jun Okabe, Harikrishnan Kaipananickal, Hanah Rodriguez, Ishant Khurana, Keith Al-Hasani, Bryna S M Chow, Eleni Pitsillou, Tom C Karagiannis, Karin Jandeleit-Dahm, Ronald C W Ma, Yu Huang, Juliana C N Chan, Mark E Cooper, Assam El-Osta
BACKGROUND: Hyperglycaemia influences the development of glomerular endothelial cell damage and nowhere is this more evident than in the progression of diabetic kidney disease (DKD). While the Set7 lysine methyltransferase is a known hyperglycaemic sensor, its role in endothelial cell function in the context of DKD remains poorly understood. METHODS: Single-cell transcriptomics was used to investigate Set7 regulation in a mouse model of DKD, followed by validation of findings using pharmacological and shRNA inhibition of Set7...
April 17, 2024: Journal of the American Society of Nephrology: JASN
https://read.qxmd.com/read/38626292/bcl2a1-neoepitopes-elicited-cytotoxic-t-lymphocytes-are-a-promising-individualized-immunotherapy-of-pancreatic-cancer
#15
JOURNAL ARTICLE
Shengzhe Lin, Jingwen Hong, Suxin Wu, Chenlu Zhu, Fang Liu, Wansong Lin, Xinran Cai, Yunbin Ye, Yanling Chen
Conventional treatments have shown a limited efficacy for pancreatic cancer, and immunotherapy is an emerging option for treatment of this highly fatal malignancy. Neoantigen is critical to improving the efficacy of tumor-specific immunotherapy. The cancer and peripheral blood specimens from human leukocyte antigen (HLA)-A0201 positive pancreatic cancer patient were subjected to next-generation sequencing and bioinformatics analyses were performed to screen high-affinity and highly stable neoepitopes. The activation of cytotoxic T lymphocytes (CTLs) by the mutBCL2A111-20 neoepitope targeting B-cell lymphoma 2-related protein A1 (BCL2A1) mutant epitope was investigated, and the cytotoxicity of mutBCL2A111-20 neoepitope-specific CTLs to pancreatic cancer cells was evaluated...
April 16, 2024: Journal of Leukocyte Biology
https://read.qxmd.com/read/38619311/development-of-a-personalized-feedback-intervention-targeting-pain-related-anxiety-for-adults-reporting-hazardous-drinking-and-chronic-pain-a-randomized-controlled-trial
#16
JOURNAL ARTICLE
Andrew H Rogers, Clayton Neighbors, Jaye L Derrick, Michael J Zvolensky
OBJECTIVE: Among individuals with chronic pain, the rate of hazardous alcohol use is elevated compared to the general population. Yet, hazardous drinkers with chronic pain remain an underserved group. There is a need to develop and test alternative and complementary interventions to reduce hazardous alcohol use among this high-risk segment of the general population; targeting pain-related anxiety, a candidate mechanism, is one theoretically-informed route. METHOD: Our approach followed a staged model (1a/1b) to develop and test a novel personalized feedback intervention (PFI)...
April 15, 2024: Journal of Studies on Alcohol and Drugs
https://read.qxmd.com/read/38617932/pan-cancer-analysis-of-arfs-family-and-arf5-promoted-the-progression-of-hepatocellular-carcinoma
#17
JOURNAL ARTICLE
Qian Li, Fang Li, Xinqiu Song, Ning Lu, Xintao Jing, Hua Wen, Peihan Ma, Hua Zhang, Wenzhu Yao, Xiaofei Wang, Mingxin Zhang
BACKGROUND: ARF family proteins are a kind of small GTPases, which are involved in regulating a variety of basic functions of cells. In recent years, the role and molecular regulatory mechanisms of ARFs in tumor progression have received increasing attention, and research reports on most of their family members are increasing. However, research on the clinical and pathological relevance of ARF5 in cancer, especially in hepatocellular carcinoma, still needs to be improved. METHODS: RNA-seq data in the Cancer Genome Atlas (TCGA) and genome tissue expression (GTEx) databases were used to analyze the expression and pathological data of ARFs family in Pan-cancer...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38614124/flna-overexpression-promotes-papillary-thyroid-cancer-aggression-via-the-fak-akt-signaling-pathway
#18
JOURNAL ARTICLE
Weiwei Liang, Yilin Zhang, Yan Guo, Pengyuan Zhang, Jiewen Jin, Hongyu Guan, Yanbing Li
BACKGROUND: Filamin A (FLNA) is a member of filamin family and has been found to be critical for the progression of several cancers. However, its biological function in papillary thyroid cancer (PTC) remains largely unexplored. METHODS: Data from The Cancer Genome Atlas (TCGA) databases were utilized to analyze the FLNA expression level and its influence on the clinical implication of patients with PTC. Gene Expression Omnibus (GEO) and quantitative real-time reverse transcriptase PCR (qRT-PCR) was used to verify the expression levels of FLNA in PTC...
April 1, 2024: Endocrine Connections
https://read.qxmd.com/read/38598542/interference-with-mitochondrial-metabolism-could-serve-as-a-potential-therapeutic-strategy-for-advanced-prostate-cancer
#19
JOURNAL ARTICLE
Chuang Wu, Huihuang Zhu, Yang Zhang, Li Ding, Junqi Wang
Metabolic reprogramming has been defined as a hallmark of malignancies. Prior studies have focused on the single nucleotide polymorphism (SNP) of POLG2 gene, which is reportedly responsible for encoding mitochondrial DNA genes and is implicated in the material and energy metabolism of tumor cells, whereas its function in prostate cancer has been elusive. Gene expression profile matrix and clinical information were downloaded from TCGA (The Cancer Genome Atlas) data portal, and GSE3325 and GSE8511 were retrieved from GEO (Gene Expression Omnibus) database...
2024: PloS One
https://read.qxmd.com/read/38596854/effectiveness-of-web-based-personalised-feedback-interventions-for-reducing-alcohol-consumption-among-university-students-a-systematic-review-and-meta-analysis
#20
REVIEW
María Pueyo-Garrigues, Hannah Carver, Amy Parr, María Lavilla-Gracia, Cristina Alfaro-Díaz, Nuria Esandi-Larramendi, Navidad Canga-Armayor
ISSUES: Meta-analysis was conducted to examine standalone web-based personalised feedback interventions (PFI) delivered in non-structured settings for reducing university students' alcohol consumption. Subgroup analyses by gender-focus, type-of-content and accessibility were conducted. Characteristics of the sample, the intervention and study quality were examined as moderators. APPROACH: Ten databases were searched from 2000 to 2023. Eligible articles involved only randomised controlled trials...
April 10, 2024: Drug and Alcohol Review
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