keyword
https://read.qxmd.com/read/38144299/mir-122-5p-as-a-potential-regulator-of-pulmonary-vascular-wall-cell-in-idiopathic-pulmonary-arterial-hypertension
#21
JOURNAL ARTICLE
Hui Zhao, Ruowang Duan, Qian Wang, Xiaoyi Hu, Qinhua Zhao, Wenhui Wu, Rong Jiang, Sugang Gong, Lan Wang, Jinming Liu, Jie Deng, Huazheng Liang, Yuqing Miao, Ping Yuan
MicroRNAs (miRNAs) are versatile regulators of pulmonary arterial remodeling in idiopathic pulmonary arterial hypertension (IPAH). We herein aimed to characterize miRNAs in peripheral blood mononuclear cell (PBMC) and plasma exosomes, and investigate specific miRNA expression in pulmonary artery cells and lung tissues in IPAH. A co-dysregulated miRNA was identified from the miRNA expression profiles of PBMC and plasma exosomes in IPAH. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed the potential function of differentially expressed miRNAs...
December 2023: Heliyon
https://read.qxmd.com/read/38130740/exosome-mediated-transfer-of-circrna563-promoting-hepatocellular-carcinoma-by-targeting-the-microrna148a-3p-metal-regulatory-transcription-factor-1-pathway
#22
JOURNAL ARTICLE
Zhuo-Zhen Lyu, Meng Li, Ming-Yu Yang, Mei-Hong Han, Zhen Yang
BACKGROUND: Mesenchymal stem cells (MSCs) exert anti-oncogenic effects via exosomes containing non-coding RNA (ncRNA), which play important roles in tumor biology. Our preliminary study identified the interaction of the ncRNA hsa_circ_0000563 (circ563) and the circ563-associated miR-148a-3p in exosomes, as miR-148a-3p and its target metal-regulatory transcription factor-1 (MTF-1) are implicated in hepatocellular carcinoma (HCC) progression. AIM: To identify the clinical significance, functional implications, and mechanisms of circ563 in HCC...
December 14, 2023: World Journal of Gastroenterology: WJG
https://read.qxmd.com/read/38091146/electrochemiluminescent-bioassay-based-on-ru-zr-btc-mofs-nanoparticles-for-determination-of-let-7a-mirna-using-the-hybridization-chain-reaction
#23
JOURNAL ARTICLE
Fei Meng, Yisi Wang, Xinxin Lv, Fang Feng, Gongjun Yang
Carboxyl-rich tris(4,4'-dicarboxylic acid-2,2'-bipyridyl) ruthenium(II) ([Ru(dcbpy)3 ]2+ ) and 1,3,5-phenyl tricarboxylic acid (H3 BTC) were used as the organic ligand to synthesize the metal-organic frameworks by a simple one-pot hydrothermal method with ZrCl4 as metal ion source. Subsequently, the excellent electrochemiluminescence (ECL) luminophore (denoted as Ru@Zr-BTC-MOFs) was obtained. The Ru@Zr-BTC-MOFs displayed outstanding ECL properties, and a sensitive ECL bioassay based on Ru@Zr-BTC-MOFs was designed for the detection of let-7a microRNA (miRNA) using hybrid chain reaction (HCR)...
December 13, 2023: Mikrochimica Acta
https://read.qxmd.com/read/38074282/periconceptional-and-prenatal-exposure-to-metals-and-extracellular-vesicle-and-particle-mirnas-in-human-milk-a-pilot-study
#24
JOURNAL ARTICLE
Caitlin G Howe, David A Armstrong, Meghan E Muse, Diane Gilbert-Diamond, Jiang Gui, Anne G Hoen, Thomas J Palys, Roxanna L Barnaby, Bruce A Stanton, Brian P Jackson, Brock C Christensen, Margaret R Karagas
Human milk is a rich source of microRNAs (miRNAs), which can be transported by extracellular vesicles and particles (EVPs) and are hypothesized to contribute to maternal-offspring communication and child development. Environmental contaminant impacts on EVP miRNAs in human milk are largely unknown. In a pilot study of 54 mother-child pairs from the New Hampshire Birth Cohort Study, we examined relationships between five metals (arsenic, lead, manganese, mercury, and selenium) measured in maternal toenail clippings, reflecting exposures during the periconceptional and prenatal periods, and EVP miRNA levels in human milk...
December 2023: Exposure & Health
https://read.qxmd.com/read/38042003/mir397b-lac2-module-regulates-cadmium-stress-response-by-coordinating-root-lignification-and-copper-homeostasis-in-arabidopsis-thaliana
#25
JOURNAL ARTICLE
Subhash Reddy Gaddam, Ashish Sharma, Prabodh Kumar Trivedi
Non-essential heavy metal cadmium (Cd) is toxic to plants and animals. Cadmium affects plant photosynthesis, respiration, and causes water imbalance and may lead to plant death. Cadmium induces toxicity by interfering with the essential metal copper (Cu) homeostasis, which affects plant nutrition. Though root lignin biosynthesis is positively regulated by Cd stress, the underlying mechanisms promoting lignin accumulation and controlling Cd-induced Cu limitation responses are unclear. Here, we elucidated the role of Cu-responsive microRNA (miR397b) in Arabidopsis thaliana plants for Cd stress by targeting the LACCASE2 (LAC2) gene...
November 28, 2023: Journal of Hazardous Materials
https://read.qxmd.com/read/38039736/protonation-mediated-dna-tile-self-assembly-with-nuclease-resistance-characteristic-for-signal-amplified-detection-of-micrornas
#26
JOURNAL ARTICLE
Yanan Peng, Dongxia Li, Bin Qiao, Zhijun Gao, Qiumei Pu, Huajie Pang, Xiangde Lai, Rui Zhang, Xuan Zhao, Guangyuan Zhao, Dan Xu, Feng Han, Yuanyuan Wang, Yuxiang Ji, Hua Pei, Qiang Wu
DNA nanotechnology, developing rapidly in recent years, has unprecedented superiorities in biological application-oriented research including high programmability, convenient functionalization, reconfigurable structure, and intrinsic biocompatibility. However, the susceptibility to nucleases in the physiological environment has been an obstacle to applying DNA nanostructures in biological science research. In this study, a new DNA self-assembly strategy, mediated by double-protonated small molecules instead of classical metal ions, is developed to enhance the nuclease resistance of DNA nanostructures while retaining their integrality and functionality, and the relative application has been launched in the detection of microRNAs (miRNAs)...
November 25, 2023: Biosensors & Bioelectronics
https://read.qxmd.com/read/38029964/when-argonaute-takes-out-the-ribonuclease-sword
#27
REVIEW
Kotaro Nakanishi
Argonaute (AGO) proteins in all three domains of life form ribonucleoprotein or deoxyribonucleoprotein complexes by loading a guide RNA or DNA, respectively. Since all AGOs retain a PIWI domain that takes an RNase H fold, the ancestor was likely an endoribonuclease (i.e., a slicer). In animals, most microRNA (miRNA)-mediated gene silencing occurs slicer-independently. However, the slicer activity of AGO is indispensable in specific events, such as development and differentiation, which are critical for vertebrates and thus cannot be replaced by the slicer-independent regulation...
November 27, 2023: Journal of Biological Chemistry
https://read.qxmd.com/read/38010663/cisplatin-induces-acute-kidney-injury-by-downregulating-mir-30e-5p-that-targets-galnt3-to-activate-the-ampk-signaling-pathway
#28
JOURNAL ARTICLE
Weipu Mao, Lei Zhang, Yiduo Wang, Si Sun, Jianping Wu, Jie Sun, Xiangyu Zou, Ming Chen, Guangyuan Zhang
Cisplatin nephrotoxicity is an etiological factor for acute kidney injury (AKI). MicroRNA (miRNA) expression is dysregulated in cisplatin-induced AKI (cAKI) although the underlying mechanisms are unclear. A cAKI model was established by intraperitoneally injecting cisplatin, and key miRNAs were screened using high-throughput miRNA sequencing. The functions of key miRNAs were determined using the cell viability, live/dead, reactive oxygen species (ROS), and 5-ethynyl-2'-deoxyuridine (EdU) proliferation assays...
November 27, 2023: Environmental Toxicology
https://read.qxmd.com/read/37998152/plasmonic-nanoparticle-enhanced-optical-techniques-for-cancer-biomarker-sensing
#29
REVIEW
Li Fu, Cheng-Te Lin, Hassan Karimi-Maleh, Fei Chen, Shichao Zhao
This review summarizes recent advances in leveraging localized surface plasmon resonance (LSPR) nanotechnology for sensitive cancer biomarker detection. LSPR arising from noble metal nanoparticles under light excitation enables the enhancement of various optical techniques, including surface-enhanced Raman spectroscopy (SERS), dark-field microscopy (DFM), photothermal imaging, and photoacoustic imaging. Nanoparticle engineering strategies are discussed to optimize LSPR for maximum signal amplification. SERS utilizes electromagnetic enhancement from plasmonic nanostructures to boost inherently weak Raman signals, enabling single-molecule sensitivity for detecting proteins, nucleic acids, and exosomes...
November 8, 2023: Biosensors
https://read.qxmd.com/read/37996164/-eu-mof-derived-smart-luminescent-sensing-for-ultrasensitive-on-site-detection-of-mir-892b
#30
JOURNAL ARTICLE
Yuchi Zhang, Mengqin Shi, Yin Qian, Haiying Wang, Xinzhe Zhang, Jinpeng He, Binbin Jiang, Yanmei Chen, Xiaoxia Mao
MicroRNAs (miRNAs) are important biomacromolecules used as biomarkers for the diagnosis of several diseases. However, current detection strategies are limited by expensive equipment and complicated procedures. Here, we develop a portable, sensitive, and stable (Eu-MOF)-based sensing platform to detect miRNA via smartphone. The Eu-MOF absorbs the carboxyfluorescein (FAM)-tagged probe DNA (pDNA) to generate hybrid pDNA@Eu-MOF, which can efficiently quench the fluorescence of FAM through a photoinduced electron transfer (PET) process...
December 15, 2023: Analytica Chimica Acta
https://read.qxmd.com/read/37951395/untying-the-regulatory-roles-of-mirnas-in-cuo-nps-stress-response-mechanism-in-maize-a-genome-wide-srna-transcriptome-analysis
#31
JOURNAL ARTICLE
Doyel Roy, Ayan Adhikari, Shrabani Saha, Pratyush Kanti Ghosh, Arun Kumar Shaw, Moupriya Mukherjee, Goutam Pramanik, Zahed Hossain
MicroRNAs (miRNAs), a group of tiny non-coding RNAs play pivotal role in plant responses to environmental stress. The present small RNA transcriptome study aims to untie the role of miRNAs in CuO-NPs stress adaptation in maize seedlings. Restricted seedling growth, enhanced ROS generation and higher membrane damage were recorded under CuO-NPs [<50 nm, 8 mM] treatment. Deep sequencing reveals 7 up- and 36 down-regulated known miRNAs from CuO-NPs challenged leaves. Gene ontology study demonstrates involvement of CuO-NPs responsive miRNAs in a variety of biological processes including plant growth (miR159a, miR159b), redox homeostasis (miR156e, miR395a), detoxification of heavy metals (miR156e, miR827), signal transduction (miR156e, miR156d), and cell signalling (miR167b-3p, miR393a)...
November 9, 2023: Chemosphere
https://read.qxmd.com/read/37929302/photocontrollable-dna-walker-based-molecular-circuit-for-the-tunable-detection-of-microrna-21-using-metal-organic-frameworks-as-label-free-fluorescence-tags
#32
JOURNAL ARTICLE
Jiang Xue Dong, Sai Mei Zhang, Yan Lei Li, Xu Zhang, Ya Jie Fan, Ming Su, Zhen Guang Wang, Hui Li, Shi Gang Shen, Zhong Feng Gao, Qin Wei, Fan Xia
Tunable detection of microRNA is crucial to meet the desired demand for sample species with varying concentrations in clinical settings. Herein, we present a DNA walker-based molecular circuit for the detection of miRNA-21 (miR-21) with tunable dynamic ranges and sensitivity levels ranging from fM to pM. The phosphate-activated fluorescence of UiO-66-NH2 metal-organic framework nanoparticles was used as label-free fluorescence tags due to their competitive coordination effect with the Zr atom, which significantly inhibited the ligand-to-metal charge transfer...
November 14, 2023: Analytical Chemistry
https://read.qxmd.com/read/37870556/hierarchical-mof-aunp-hairpin-nanotheranostic-for-enhanced-photodynamic-therapy-via-o-2-self-supply-and-cancer-related-microrna-imaging-in-vivo
#33
JOURNAL ARTICLE
Chan Yang, Shuo Tian, Weiyu Qiu, Liuting Mo, Weiying Lin
Developing a nanotheranostic with a high sensing performance and efficient therapy was significant in cancer diagnosis and treatment. Herein, a Au nanoparticle and hairpin-loaded photosensitive metal-organic framework (PMOF@AuNP/hairpin) nanotheranostic was constructed by growing AuNPs on PMOF in situ and then attaching hairpins. On the one hand, the PMOF@AuNP/hairpin nanotheranostic could effectively transfer O2 into ROS, facilitating efficient PDT. Additionally, the nanotheranostic possessed catalase-like activity, which could effectively catalyze H2 O2 to generate O2 , thus achieving O2 -evolving PDT and significantly enhancing the antitumor effect of PDT in vivo...
October 23, 2023: Analytical Chemistry
https://read.qxmd.com/read/37839473/mitomir-1736-3p-regulates-copper-induced-mitochondrial-pathway-apoptosis-by-inhibiting-aatf-in-chicken-hepatocytes
#34
JOURNAL ARTICLE
Yuanxu Li, Gaolong Zhong, Lei Li, Tingyu Li, Huayu Li, Ying Li, Hui Zhang, Jiaqiang Pan, Lianmei Hu, Jianzhao Liao, Wenlan Yu, Zhaoxin Tang
Copper (Cu) is a toxic heavy metal pollutant. The hepatic toxicity of Cu has attracted widespread attention from researchers. However, its underlying mechanism remains elusive. Mitochondrial microRNAs (mitomiRs) are considered important factors in regulating mitochondrial and cellular functions, and their roles have been implicated in the mechanisms of metal toxicity. Therefore, this research revealed the changes in the mitomiRs expression profile of chicken liver after Cu exposure. It was ultimately determined that mitomiR-1736-3p can be involved in Cu-induced chicken liver damage by targeting AATF...
October 13, 2023: Science of the Total Environment
https://read.qxmd.com/read/37823154/evaluating-the-effect-of-food-components-on-the-digestion-of-dietary-nucleic-acids-in-human-gastric-juice-in-vitro
#35
JOURNAL ARTICLE
Yanfang Zhang, Jingyi Dong, Jingxian Chen, Xiaoming Pan
Nucleic acids (NAs) were recently shown to be digested by pepsin in vitro; however, NAs digestion in human gastric juice in vivo is more complicated because of the complex gastric environment and ingestion of other food components. The purpose of this study was to investigate the digestibility of NAs in real human gastric juices after ingestion of other food components. As a result, DNA digestion was not affected when carbohydrates, proteins, and metal elements were ingested within the recommended dietary intake levels...
October 2023: Food Science & Nutrition
https://read.qxmd.com/read/37810661/drought-induced-mirna-expression-correlated-with-heavy-metal-phenolic-acid-and-protein-and-nitrogen-levels-in-five-chickpea-genotypes
#36
JOURNAL ARTICLE
Behcet Inal, Mohsen Mirzapour, Ebru Derelli Tufekci, Mustafa Rustemoglu, Adem Kaba, Marzough Aziz Albalawi, Adel I Alalawy, Mohamed Sakran, Mohammed Alqurashi, Allah Ditta
Drought is a prime stress, drastically affecting plant growth, development, and yield. Plants have evolved various physiological, molecular, and biochemical mechanisms to cope with drought. Investigating specific biochemical pathways related to drought tolerance mechanisms of plants through biotechnology approaches is one of the quickest and most effective strategies for enhancing crop production. Among them, microRNAs (miRNAs) are the principal post-transcriptional regulators of gene expression in plants during plant growth under biotic and abiotic stresses...
October 3, 2023: ACS Omega
https://read.qxmd.com/read/37788778/essential-metals-modified-the-effects-of-polycyclic-aromatic-hydrocarbons-on-the-metabolic-syndrome-mediation-effects-of-mirna
#37
JOURNAL ARTICLE
Qifei Deng, Yanzhu Wei, Kang Liu, Degang Wu, Xinyu Zhu, Mengya Xu, Yansen Bai
Metabolic syndrome (MetS) prevalence has increased dramatically worldwide and has become a public health issue. Polycyclic aromatic hydrocarbons (PAHs) were identified as risk factors of MetS, while essential metals are integral parts of metalloenzymes catalyzing metabolic processes. However, effects of co-exposure to PAHs and essential metals have not been investigated yet. We aimed to assess whether essential metals could modify the hazard effects of PAHs on MetS, and underlying mediation effects of microRNA (miRNAs) were further explored...
October 1, 2023: Science of the Total Environment
https://read.qxmd.com/read/37741978/dominoes-with-interlocking-consequences-triggered-by-zinc-involvement-of-microelement-stimulated-msc-derived-exosomes-in-senile-osteogenesis-and-osteoclast-dialogue
#38
JOURNAL ARTICLE
Shi Yin, Sihan Lin, Jingyi Xu, Guangzheng Yang, Hongyan Chen, Xinquan Jiang
As societal aging intensifies, senile osteoporosis has become a global public health concern. Bone microdamage is mainly caused by processes such as enhancing osteoclast activity or reducing bone formation by osteoblast-lineage cells. Compared with young individuals, extracellular vesicles derived from senescent bone marrow mesenchymal stem cells(BMSCs) increase the transient differentiation of bone marrow monocytes (BMMs) to osteoclasts, ultimately leading to osteoporosis and metal implant failure. To address this daunting problem, an exosome-targeted orthopedic implant composed of a nutrient coating was developed...
September 23, 2023: Journal of Nanobiotechnology
https://read.qxmd.com/read/37731721/potential-molecular-targets-for-intervention-in-pelvic-organ-prolapse
#39
REVIEW
Xia Wu, Xiaochun Liu, Tingting Li
Pelvic organ prolapse (POP) is a concerning gynecological benign illness in middle-aged and senior women. Its etiology is complex, the incidence rate is high, symptoms are clinically subjective, and its influence tends to be polarized. At present, for those who need medical treatment, whether surgical or non-surgical, complications cannot be ignored, and treatment effect needs to be optimized. However, there is a lack of accurate molecular biological interventions for the prevention, diagnosis, progression delay, and treatment of POP...
2023: Frontiers in Medicine
https://read.qxmd.com/read/37716260/novel-electrochemical-biosensor-for-breast-cancer-detection-based-on-a-nanocomposite-of-carbon-nanofiber-metal-organic-framework-and-magnetic-graphene-oxide
#40
JOURNAL ARTICLE
Emadoddin Amin Sadrabadi, Ali Benvidi, Mostafa Azimzadeh, Leila Asgharnejad, Amin Shiralizadeh Dezfuli, Patricia Khashayar
In this study, we present the newly developed a novel microRNA biosensor based on magnetic rod carbon paste electrodes for breast cancer detection by using a relatively new MOF structure as a substrate. The major goal of manufacturing biosensors, suitable for clinical diagnostics, is to measure very low amount of microRNA 155 in complex environments. Therefore, we used a combination of different materials, including carbon nanofibers, CuBTC-AIA (CuMOF), and Fe@rGO, to improve the electrode surface-to-volume ratio and facilitate the electron transfer process...
September 6, 2023: Bioelectrochemistry
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