keyword
MENU ▼
Read by QxMD icon Read
search

Quantitative susceptibility mapping

keyword
https://www.readbyqxmd.com/read/28221362/disrupted-iron-regulation-in-the-brain-and-periphery-in-cocaine-addiction
#1
K D Ersche, J Acosta-Cabronero, P S Jones, H Ziauddeen, R P L van Swelm, C M M Laarakkers, R Raha-Chowdhury, G B Williams
Stimulant drugs acutely increase dopamine neurotransmission in the brain, and chronic use leads to neuroadaptive changes in the mesolimbic dopamine system and morphological changes in basal ganglia structures. Little is known about the mechanisms underlying these changes but preclinical evidence suggests that iron, a coenzyme in dopamine synthesis and storage, may be a candidate mediator. Iron is present in high concentrations in the basal ganglia and stimulant drugs may interfere with iron homeostasis. We hypothesised that morphological brain changes in cocaine addiction relate to abnormal iron regulation in the brain and periphery...
February 21, 2017: Translational Psychiatry
https://www.readbyqxmd.com/read/28215716/validation-of-a-quantitative-susceptibility-mapping-acquisition-and-reconstruction-pipeline-using-a-new-iron-sucrose-based-mr-susceptibility-phantom
#2
Jeremy Deverdun, François Molino, Nicolas Menjot de Champfleur, Emmanuelle Le Bars
PURPOSE: Quantitative susceptibility mapping is a new technique and its processing pipeline has to be validated before clinical practice. We described an easy to build magnetic resonance (MR) susceptibility phantom based on iron sucrose. MATERIALS AND METHODS: In a plastic container, Eppendorf tubes containing increasing iron sucrose concentration ranging from 0 to 60μg Fe/mL were inserted in an agarose gel. To estimate susceptibility, multiple coronal gradient echo acquisitions were performed with varying angle of the phantom relative to the B0 field, ranging from 30 to 90°...
February 16, 2017: Journal of Neuroradiology. Journal de Neuroradiologie
https://www.readbyqxmd.com/read/28207389/an-efficient-reconstruction-algorithm-based-on-the-alternating-direction-method-of-multipliers-for-joint-estimation-of-r2-and-off-resonance-in-fmri
#3
Chenxi Hu, Stanley Reeves, Dana Peters, Donald Twieg
R 2 mapping is a useful tool in blood-oxygen-level dependent (BOLD) fMRI due to its quantitative nature. However, like T 2 -weighted imaging, standard R 2 mapping based on multiecho EPI suffers from geometric distortion, due to strong offresonance near the air-tissue interface. Joint mapping of R 2 and off-resonance can correct the geometric distortion and is less susceptible to motion artifacts. Single-shot joint mapping of R 2 and off-resonance is possible with a rosette trajectory due to its frequent sampling of the k-space center...
February 13, 2017: IEEE Transactions on Medical Imaging
https://www.readbyqxmd.com/read/28188873/an-improved-fsl-first-pipeline-for-subcortical-gray-matter-segmentation-to-study-abnormal-brain-anatomy-using-quantitative-susceptibility-mapping-qsm
#4
Xiang Feng, Andreas Deistung, Michael G Dwyer, Jesper Hagemeier, Paul Polak, Jessica Lebenberg, Frédérique Frouin, Robert Zivadinov, Jürgen R Reichenbach, Ferdinand Schweser
Accurate and robust segmentation of subcortical gray matter (SGM) nuclei is required in many neuroimaging applications. FMRIB's Integrated Registration and Segmentation Tool (FIRST) is one of the most popular software tools for automated subcortical segmentation based on T1-weighted (T1w) images. In this work, we demonstrate that FIRST tends to produce inaccurate SGM segmentation results in the case of abnormal brain anatomy, such as present in atrophied brains, due to a poor spatial match of the subcortical structures with the training data in the MNI space as well as due to insufficient contrast of SGM structures on T1w images...
February 7, 2017: Magnetic Resonance Imaging
https://www.readbyqxmd.com/read/28184981/association-mapping-utilizing-diverse-barley-lines-reveals-net-form-net-blotch-seedling-resistance-susceptibility-loci
#5
Jonathan K Richards, Timothy L Friesen, Robert S Brueggeman
A diverse collection of barley lines was phenotyped with three North American Pyrenophora teres f. teres isolates and association analyses detected 78 significant marker-trait associations at 16 genomic loci. Pyrenophora teres f. teres is a necrotrophic fungal pathogen and the causal agent of the economically important foliar disease net form net blotch (NFNB) of barley. The deployment of effective and durable resistance against P. teres f. teres has been hindered by the complexity of quantitative resistance and susceptibility...
February 9, 2017: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://www.readbyqxmd.com/read/28163582/mapping-a-qtl-conferring-resistance-to-fusarium-head-blight-on-chromosome-1b-in-winter-wheat-triticum-aestivum-l
#6
Zenta Nishio, Chihiro Onoe, Miwako Ito, Tadashi Tabiki, Koichi Nagasawa, Hideho Miura
Fusarium head blight (FHB) is one of the most devastating diseases of wheat (Triticum aestivum L.), and the development of cultivars with FHB resistance is the most effective way to control the disease. Yumechikara is a Japanese hard red winter wheat cultivar that shows moderate resistance to FHB with superior bread-making quality. To identify quantitative trait loci (QTLs) for FHB resistance in Yumechikara, we evaluated doubled haploid lines derived from a cross between Yumechikara and a moderate susceptible cultivar, Kitahonami, for FHB resistance in a 5-year field trial, and we analyzed polymorphic molecular markers between the parents...
December 2016: Breeding Science
https://www.readbyqxmd.com/read/28143574/feasibility-of-real-time-mr-thermal-dose-mapping-for-predicting-radiofrequency-ablation-outcome-in-the-myocardium-in-vivo
#7
Solenn Toupin, Pierre Bour, Matthieu Lepetit-Coiffé, Valéry Ozenne, Baudouin Denis de Senneville, Rainer Schneider, Alexis Vaussy, Arnaud Chaumeil, Hubert Cochet, Frédéric Sacher, Pierre Jaïs, Bruno Quesson
BACKGROUND: Clinical treatment of cardiac arrhythmia by radiofrequency ablation (RFA) currently lacks quantitative and precise visualization of lesion formation in the myocardium during the procedure. This study aims at evaluating thermal dose (TD) imaging obtained from real-time magnetic resonance (MR) thermometry on the heart as a relevant indicator of the thermal lesion extent. METHODS: MR temperature mapping based on the Proton Resonance Frequency Shift (PRFS) method was performed at 1...
January 25, 2017: Journal of Cardiovascular Magnetic Resonance
https://www.readbyqxmd.com/read/28137548/intraoperative-mr-imaging-of-cerebral-oxygen-metabolism-during-resection-of-brain-lesions
#8
REVIEW
Andreas Stadlbauer, Andreas Merkel, Max Zimmermann, Björn Sommer, Michael Buchfelder, Anke Meyer-Bäse, Karl Rössler
OBJECTIVE: Tissue oxygen tension is an important parameter for brain tissue viability and its non-invasive intraoperative monitoring in the whole brain is of highly clinical relevance. The purpose of this study was the introduction of a multiparametric quantitative blood oxygenation dependent (qBOLD) MRI approach for intraoperative examination of oxygen metabolism during the resection of brain lesions. METHODS: Sixteen patients suffering from brain lesions were intraoperatively examined twice (before craniotomy and after gross-total resection) using the qBOLD technique and a 1...
January 27, 2017: World Neurosurgery
https://www.readbyqxmd.com/read/28126551/exploring-the-origins-of-echo-time-dependent-quantitative-susceptibility-mapping-qsm-measurements-in-healthy-tissue-and-cerebral-microbleeds
#9
Matthew J Cronin, Nian Wang, Kyle S Decker, Hongjiang Wei, Wen-Zhen Zhu, Chunlei Liu
Quantitative susceptibility mapping (QSM) is increasingly used to measure variation in tissue composition both in the brain and in other areas of the body in a range of disease pathologies. Although QSM measurements were originally believed to be independent of the echo time (TE) used in the gradient-recalled echo (GRE) acquisition from which they are derived; recent literature (Sood et al., 2016) has shown that these measurements can be highly TE-dependent in a number of brain regions. In this work we systematically investigate possible causes of this effect through analysis of apparent frequency and QSM measurements derived from data acquired at multiple TEs in vivo in healthy brain regions and in cerebral microbleeds (CMBs); QSM data acquired in a gadolinium-doped phantom; and in QSM data derived from idealized simulated phase data...
January 23, 2017: NeuroImage
https://www.readbyqxmd.com/read/28116503/genetic-analysis-of-a-mouse-cross-implicates-an-anti-inflammatory-gene-in-control-of-atherosclerosis-susceptibility
#10
Norman E Garrett, Andrew T Grainger, Jing Li, Mei-Hua Chen, Weibin Shi
Nearly all genetic crosses generated from Apoe(-/-) or Lldlr(-/-) mice for genetic analysis of atherosclerosis have used C57BL/6 J (B6) mice as one parental strain, thus limiting their mapping power and coverage of allelic diversity. SM/J-Apoe (-/-) and BALB/cJ-Apoe (-/-) mice differ significantly in atherosclerosis susceptibility. 224 male F2 mice were generated from the two Apoe (-/-) strains to perform quantitative trait locus (QTL) analysis of atherosclerosis. F2 mice were fed 5 weeks of Western diet and analyzed for atherosclerotic lesions in the aortic root...
January 23, 2017: Mammalian Genome: Official Journal of the International Mammalian Genome Society
https://www.readbyqxmd.com/read/28113841/quantitative-susceptibility-mapping-using-structural-feature-based-collaborative-reconstruction-sfcr-in-the-human-brain
#11
Lijun Bao, Xu Li, Congbo Cai, Zhong Chen, Peter van Zijl
The reconstruction of MR quantitative susceptibility mapping (QSM) from local phase measurements is an ill posed inverse problem and different regularization strategies incorporating a priori information extracted from magnitude and phase images have been proposed. However, the anatomy observed in magnitude and phase images does not always coincide spatially with that in susceptibility maps, which could give erroneous estimation in the reconstructed susceptibility map. In this paper, we develop a structural feature based collaborative reconstruction (SFCR) method for QSM including both magnitude and susceptibility based information...
March 22, 2016: IEEE Transactions on Medical Imaging
https://www.readbyqxmd.com/read/28109190/qtl-mapping-and-candidate-genes-for-resistance-to-fusarium-ear-rot-and-fumonisin-contamination-in-maize
#12
Valentina Maschietto, Cinzia Colombi, Raul Pirona, Giorgio Pea, Francesco Strozzi, Adriano Marocco, Laura Rossini, Alessandra Lanubile
BACKGROUND: Fusarium verticillioides is a common maize pathogen causing ear rot (FER) and contamination of the grains with the fumonisin B1 (FB1) mycotoxin. Resistance to FER and FB1 contamination are quantitative traits, affected by environmental conditions, and completely resistant maize genotypes to the pathogen are so far unknown. In order to uncover genomic regions associated to reduced FER and FB1 contamination and identify molecular markers for assisted selection, an F2:3 population of 188 progenies was developed crossing CO441 (resistant) and CO354 (susceptible) genotypes...
January 21, 2017: BMC Plant Biology
https://www.readbyqxmd.com/read/28105932/genes-of-susceptibility-to-early-neurodegenerative-changes-in-the-rat-retina-and-brain-analysis-by-means-of-congenic-strains
#13
Elena E Korbolina, Anna A Zhdankina, Anzhela Zh Fursova, Oyuna S Kozhevnikova, Natalia G Kolosova
BACKGROUND: There has been considerable interest in discovery of the genetic architecture of complex traits, particularly age-related neurodegenerative disorders. To predict disease risk and to understand its genetic basis in humans, it is necessary to study animal models. Our previous research on the accelerated-senescence OXYS strain has revealed two quantitative trait loci (QTLs) on rat chromosome 1 that are associated with early cataract and/or retinopathy as well as with behavioral abnormalities...
December 22, 2016: BMC Genetics
https://www.readbyqxmd.com/read/28097689/investigating-magnetic-susceptibility-of-human-knee-joint-at-7-tesla
#14
Hongjiang Wei, Russell Dibb, Kyle Decker, Nian Wang, Yuyao Zhang, Xiaopeng Zong, Weili Lin, Daniel B Nissman, Chunlei Liu
PURPOSE: To evaluate the magnetic susceptibility properties of different anatomical structures within the knee joint using quantitative susceptibility mapping (QSM). METHODS: A collagen tissue model was simulated and ex vivo animal cartilage experiments were conducted at 9.4 Tesla (T) to evaluate the B0 orientation-dependent magnetic susceptibility contrast observed in cartilage. Furthermore, nine volunteers (six healthy subjects without knee pain history and three patients with known knee injury, between 29 and 58 years old) were scanned using gradient-echo acquisitions on a high-field 7T MR scanner...
January 17, 2017: Magnetic Resonance in Medicine: Official Journal of the Society of Magnetic Resonance in Medicine
https://www.readbyqxmd.com/read/28081157/simultaneous-quantitative-mri-mapping-of-t1-t2-and-magnetic-susceptibility-with-multi-echo-mp2rage
#15
Riccardo Metere, Tobias Kober, Harald E Möller, Andreas Schäfer
The knowledge of relaxation times is essential for understanding the biophysical mechanisms underlying contrast in magnetic resonance imaging. Quantitative experiments, while offering major advantages in terms of reproducibility, may benefit from simultaneous acquisitions. In this work, we demonstrate the possibility of simultaneously recording relaxation-time and susceptibility maps with a prototype Multi-Echo (ME) Magnetization-Prepared 2 RApid Gradient Echoes (MP2RAGE) sequence. T1 maps can be obtained using the MP2RAGE sequence, which is relatively insensitive to inhomogeneities of the radio-frequency transmit field, [Formula: see text]...
2017: PloS One
https://www.readbyqxmd.com/read/28079285/a-pathway-based-association-study-reveals-variants-from-wnt-signaling-genes-contributing-to-asthma-susceptibility
#16
A Barreto-Luis, A Corrales, M Acosta-Herrera, C Gonzalez-Colino, J Cumplido, J Martinez-Tadeo, A Carracedo, J Villar, T Carrillo, M Pino-Yanes, C Flores
BACKGROUND: Genetic susceptibility to asthma is currently linked to a handful of genes which have a limited ability to predict the overall disease risk, suggesting the existence of many other genes involved in disease development. Accumulated evidence from association studies in genes related by biological pathways could reveal novel asthma genes. OBJECTIVE: To reveal novel asthma susceptibility genes by means of a pathway-based association study. METHODS: Based on summary data from a previous a genome-wide association study (GWAS) of asthma, we first identified significant biological pathways using a gene-set enrichment analysis...
January 12, 2017: Clinical and Experimental Allergy: Journal of the British Society for Allergy and Clinical Immunology
https://www.readbyqxmd.com/read/28065850/deep-grey-matter-iron-accumulation-in-alcohol-use-disorder
#17
Michal Juhás, Hongfu Sun, Matthew R G Brown, Marnie B MacKay, Karl F Mann, Wolfgang H Sommer, Alan H Wilman, Serdar M Dursun, Andrew J Greenshaw
PURPOSE: Evaluate brain iron accumulation in alcohol use disorder (AUD) patients compared to controls using quantitative susceptibility mapping (QSM). METHODS: QSM was performed retrospectively by using phase images from resting state functional magnetic resonance imaging (fMRI). 20 male AUD patients and 15 matched healthy controls were examined. Susceptibility values were manually traced in deep grey matter regions including caudate nucleus, combined putamen and globus pallidus, combined substantia nigra and red nucleus, dentate nucleus, and a reference white matter region in the internal capsule...
January 5, 2017: NeuroImage
https://www.readbyqxmd.com/read/28062597/the-effect-of-susceptibility-artifacts-related-to-metal-implants-on-adjacent-lesion-assessment-in-simultaneous-tof-pet-mr
#18
Hanna Svirydenka, Gaspar Delso, Felipe DE Galiza Barbosa, Martin W Huellner, Helen Davison, Stefano Fanti, Patrick Veit-Haibach, Edwin Ter Voert
OBJECTIVE: Metal implants could affect the attenuation correction (AC) in positron emission tomography (PET)/magnetic resonance (MR) imaging. The purpose of this study is to evaluate the effect of susceptibility artifacts related to metal implants on adjacent metabolically active lesions in clinical simultaneous PET/MR scanning for both time-of-flight (TOF) and non-TOF reconstructed PET images. METHODS: We included 27 patients without implants, but with confirmed 2-deoxy-2-(18)F-fluoro-D-glucose ((18)F-FDG) avid lesions adjacent to common implant locations...
January 6, 2017: Journal of Nuclear Medicine: Official Publication, Society of Nuclear Medicine
https://www.readbyqxmd.com/read/28047531/su-g-iep1-15-towards-accurate-cerebral-blood-flow-quantification-with-distortion-corrected-pseudo-continuous-arterial-spin-labeling
#19
M Hoff, S Rane-Levandovsky, J Andre
PURPOSE: Traditional arterial spin labeling (ASL) acquisitions with echo planar imaging (EPI) readouts suffer from image distortion due to susceptibility effects, compromising ASL's ability to accurately quantify cerebral blood flow (CBF) and assess disease-specific patterns associated with CBF abnormalities. Phase labeling for additional coordinate encoding (PLACE) can remove image distortion; our goal is to apply PLACE to improve the quantitative accuracy of ASL CBF in humans. METHODS: Four subjects were imaged on a 3T Philips Ingenia scanner using a 16-channel receive coil with a 21/21/10cm (frequency/phase/slice direction) field-of-view...
June 2016: Medical Physics
https://www.readbyqxmd.com/read/28046752/su-f-i-24-feasibility-of-magnetic-susceptibility-to-relative-electron-density-conversion-method-for-radiation-therapy
#20
K Ito, N Kadoya, M Chiba, K Sato, T Nagasaka, K Yamanaka, S Dobashi, K Takeda, H Matsushita, K Jingu
PURPOSE: The aim of this study is to develop radiation treatment planning using magnetic susceptibility obtained from quantitative susceptibility mapping (QSM) via MR imaging. This study demonstrates the feasibility of a method for generating a substitute for a CT image from an MRI. METHODS: The head of a healthy volunteer was scanned using a CT scanner and a 3.0 T MRI scanner. The CT imaging was performed with a slice thickness of 2.5 mm at 80 and 120 kV (dual-energy scan)...
June 2016: Medical Physics
keyword
keyword
119781
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"