keyword
https://read.qxmd.com/read/38640426/first-report-of-the-barley-root-knot-nematode-meloidogyne-naasi-franklin-1965-from-pennsylvania-with-new-host-report
#1
JOURNAL ARTICLE
Mihail Kantor, Paulo Vieira, Zafar Handoo
Meloidogyne naasi Franklin, 1965, the barley root-knot nematode, was originally found in field crops such as cereals, grasses, and sugar beet (Beta vulgaris L.) in England and Wales, (Franklin,1965). This nematode is one of the most significant root-knot nematodes impacting grains in European countries (Santos et al. 2020). Among root-knot nematode species, M. naasi, exhibits a distinct preference for grasses, with documented impacts on turfgrasses leading to reduced growth and vigor (Skantar et al., 2023; Cook and Yeates, 1993)...
April 19, 2024: Plant Disease
https://read.qxmd.com/read/38635469/a-realist-evaluation-of-how-why-and-when-objective-structured-clinical-exams-osces-are-experienced-as-an-authentic-assessment-of-clinical-preparedness
#2
JOURNAL ARTICLE
Peter Yeates, Adriano Maluf, Ruth Kinston, Natalie Cope, Kathy Cullen, Aidan Cole, Vikki O'Neill, Ching-Wa Chung, Rhian Goodfellow, Rebecca Vallender, Sue Ensaff, Rikki Goddard-Fuller, Robert McKinley, Geoff Wong
INTRODUCTION: Whilst rarely researched, the authenticity with which Objective Structured Clinical Exams (OSCEs) simulate practice is arguably critical to making valid judgements about candidates' preparedness to progress in their training. We studied how and why an OSCE gave rise to different experiences of authenticity for different participants under different circumstances. METHODS: We used Realist evaluation, collecting data through interviews/focus groups from participants across four UK medical schools who participated in an OSCE which aimed to enhance authenticity...
April 18, 2024: Medical Teacher
https://read.qxmd.com/read/38628784/lead-optimization-of-small-molecule-enl-yeats-inhibitors-to-enable-in-vivo-studies-discovery-of-tdi-11055
#3
JOURNAL ARTICLE
Mayako Michino, Tanweer A Khan, Michael W Miller, Yoshiyuki Fukase, Jeremie Vendome, Carolina Adura, J Fraser Glickman, Yiman Liu, Liling Wan, C David Allis, Andrew W Stamford, Peter T Meinke, Louis M Renzetti, Stacia Kargman, Nigel J Liverton, David J Huggins
Eleven-nineteen leukemia (ENL) is an epigenetic reader protein that drives oncogenic transcriptional programs in acute myeloid leukemia (AML). AML is one of the deadliest hematopoietic malignancies, with an overall 5-year survival rate of 27%. The epigenetic reader activity of ENL is mediated by its YEATS domain that binds to acetyl and crotonyl marks on histone tails and colocalizes with promoters of actively transcribed genes that are essential for leukemia. Prior to the discovery of TDI-11055 , existing inhibitors of ENL YEATS showed in vitro potency, but had not shown efficacy in in vivo animal models...
April 11, 2024: ACS Medicinal Chemistry Letters
https://read.qxmd.com/read/38627605/a-scientometric-analysis-and-visualisation-of-elderly-suicide-research-from-1951-to-2022
#4
JOURNAL ARTICLE
Seher Palanbek Yavaş, Caner Baysan
BACKGROUND: There are still many gaps in both national and international literature on elderly suicide. This study aimed to identify the most influential journals in elderly suicide, the countries and authors that contribute the most to the field, and the trends in the field. MATERIAL AND METHODS: Studies published on elderly suicide between 1951 and 2022 were retrieved utilising the Web of Science Core Collection. Co-authorship analysis of countries and authors, as well as co-occurrence analysis of keywords, were conducted using VOSviewer 1...
April 16, 2024: Psychogeriatrics: the Official Journal of the Japanese Psychogeriatric Society
https://read.qxmd.com/read/38598451/social-support-and-suicidality-during-the-covid-19-pandemic-among-brazilian-healthcare-workers-a-longitudinal-assessment-of-an-online-repeated-cross-sectional-survey
#5
JOURNAL ARTICLE
Alexandre Paim Diaz, Andre Braule Pinto, Maria Isabel Chaves Araújo, Rui Mateus Joaquim, Danielle de Souza Costa, Alexandre Luiz de Oliveira Serpa, Anthony R Pisani, Yeates Conwell, Debora M Miranda, Leandro F Malloy-Diniz, Antonio G da Silva
INTRODUCTION: Healthcare workers (HCWs) are at an increased risk of suicide compared to non-healthcare workers. This study aims to investigate the association between social support and suicidal ideation and behavior (SIB) during the COVID-19 pandemic among Brazilian HCWs. METHODS: This study utilizes data from 10,885 participants who answered the first (time point 1 - between May and June of 2020) and second (time point 2 - between December 2020 and February 2021) assessments of an online repeated cross-sectional survey for evaluating mental health and quality of life of HCWs during the COVID-19 pandemic in Brazil...
April 8, 2024: Revista Brasileira de Psiquiatria
https://read.qxmd.com/read/38588684/associations-of-the-glycaemic-index-and-the-glycaemic-load-with-risk-of-type-2-diabetes-in-127%C3%A2-594-people-from-20-countries-pure-a-prospective-cohort-study
#6
JOURNAL ARTICLE
Victoria Miller, David A Jenkins, Mahshid Dehghan, Kristie Srichaikul, Sumathy Rangarajan, Andrew Mente, Viswanathan Mohan, Sumathi Swaminathan, Rosnah Ismail, Maria Luz Diaz, Rekha M Ravindran, Katarzyna Zatonska, Ahmad Bahonar, Yuksel Altuntas, Rasha Khatib, Patricio Lopez-Jaramillo, Afzalhussein Yusufali, Karen Yeates, Jephat Chifamba, Romaina Iqbal, Rita Yusuf, Elizabeth Catherina Swart, Hu Bo, Guoliang Han, Xiaocong Li, Khalid F Alhabib, Annika Rosengren, Alvaro Avezum, Fernando Lanas, Salim Yusuf
BACKGROUND: The association between the glycaemic index and the glycaemic load with type 2 diabetes incidence is controversial. We aimed to evaluate this association in an international cohort with diverse glycaemic index and glycaemic load diets. METHODS: The PURE study is a prospective cohort study of 127 594 adults aged 35-70 years from 20 high-income, middle-income, and low-income countries. Diet was assessed at baseline using country-specific validated food frequency questionnaires...
April 5, 2024: Lancet Diabetes & Endocrinology
https://read.qxmd.com/read/38572076/making-topological-protein-links-using-enzymatic-reactions
#7
JOURNAL ARTICLE
Roger Castells-Graells, Todd O Yeates
No abstract text is available yet for this article.
March 2024: National Science Review
https://read.qxmd.com/read/38564841/therapeutic-targeting-of-bet-bromodomain-and-other-epigenetic-acetylrecognition-domain-containing-factors
#8
REVIEW
Sarah Gold, Ali Shilatifard
Development of cancer therapies targeting chromatin modifiers and transcriptional regulatory factors is rapidly expanding to include new targets and novel targeting strategies. At the same time, basic molecular research continues to refine our understanding of the epigenetic mechanisms regulating transcription, gene expression, and oncogenesis. This mini-review focuses on cancer therapies targeting the chromatin-associated factors that recognize histone lysine acetylation. Recently reported safety and efficacy are discussed for inhibitors targeting the bromodomains of bromodomain and extraterminal domain (BET) family proteins...
April 1, 2024: Current Opinion in Genetics & Development
https://read.qxmd.com/read/38553921/a-retrospective-study-of-breathlessness-supportive-therapy-on-chronic-refractory-breathlessness-in-a-palliative-care-unit
#9
JOURNAL ARTICLE
K T Tay, N N Nik Isahak, N Kasinathan, C L Yeat, N D Saad
INTRODUCTION: Chronic refractory breathlessness is a debilitating symptom which negatively affects quality of life with profound impact on physical and psychosocial functioning of patients and/or carers. Multidisciplinary based interventions which focus on non-pharmacological approach have shown to be effective. We developed a breathlessness intervention service called breathlessness supportive therapy (BST) in a palliative care unit with limited resources. The aim is to evaluate the feasibility of developing a BST service and to study the characteristics and outcome of patients with chronic refractory breathlessness...
March 2024: Medical Journal of Malaysia
https://read.qxmd.com/read/38533546/design-of-a-symmetry-broken-tetrahedral-protein-cage-by-a-method-of-internal-steric-occlusion
#10
JOURNAL ARTICLE
Nika Gladkov, Elena A Scott, Kyle Meador, Eric J Lee, Arthur D Laganowsky, Todd O Yeates, Roger Castells-Graells
Methods in protein design have made it possible to create large and complex, self-assembling protein cages with diverse applications. These have largely been based on highly symmetric forms exemplified by the Platonic solids. Prospective applications of protein cages would be expanded by strategies for breaking the designed symmetry, for example, so that only one or a few (instead of many) copies of an exterior domain or motif might be displayed on their surfaces. Here we demonstrate a straightforward design approach for creating symmetry-broken protein cages able to display singular copies of outward-facing domains...
April 2024: Protein Science
https://read.qxmd.com/read/38526153/targeting-the-kat8-yeats4-axis-represses-tumor-growth-and-increases-cisplatin-sensitivity-in-bladder-cancer
#11
JOURNAL ARTICLE
Miner Xie, Liwen Zhou, Ting Li, Yujie Lin, Ruhua Zhang, Xianchong Zheng, Cuiling Zeng, Lisi Zheng, Li Zhong, Xiaodan Huang, Yezi Zou, Tiebang Kang, Yuanzhong Wu
Bladder cancer (BC) is one of the most common tumors characterized by a high rate of relapse and a lack of targeted therapy. Here, YEATS domain-containing protein 4 (YEATS4) is an essential gene for BC cell viability using CRISPR-Cas9 library screening is reported, and that HUWE1 is an E3 ligase responsible for YEATS4 ubiquitination and proteasomal degradation by the Protein Stability Regulators Screening Assay. KAT8-mediated acetylation of YEATS4 impaired its interaction with HUWE1 and consequently prevented its ubiquitination and degradation...
March 25, 2024: Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
https://read.qxmd.com/read/38514704/gas41-modulates-ferroptosis-by-anchoring-nrf2-on-chromatin
#12
JOURNAL ARTICLE
Zhe Wang, Xin Yang, Delin Chen, Yanqing Liu, Zhiming Li, Shoufu Duan, Zhiguo Zhang, Xuejun Jiang, Brent R Stockwell, Wei Gu
YEATS domain-containing protein GAS41 is a histone reader and oncogene. Here, through genome-wide CRISPR-Cas9 screenings, we identify GAS41 as a repressor of ferroptosis. GAS41 interacts with NRF2 and is critical for NRF2 to activate its targets such as SLC7A11 for modulating ferroptosis. By recognizing the H3K27-acetylation (H3K27-ac) marker, GAS41 is recruited to the SLC7A11 promoter, independent of NRF2 binding. By bridging the interaction between NRF2 and the H3K27-ac marker, GAS41 acts as an anchor for NRF2 on chromatin in a promoter-specific manner for transcriptional activation...
March 21, 2024: Nature Communications
https://read.qxmd.com/read/38513658/a-suite-of-designed-protein-cages-using-machine-learning-and-protein-fragment-based-protocols
#13
JOURNAL ARTICLE
Kyle Meador, Roger Castells-Graells, Roman Aguirre, Michael R Sawaya, Mark A Arbing, Trent Sherman, Chethaka Senarathne, Todd O Yeates
Designed protein cages and related materials provide unique opportunities for applications in biotechnology and medicine, but their creation remains challenging. Here, we apply computational approaches to design a suite of tetrahedrally symmetric, self-assembling protein cages. For the generation of docked conformations, we emphasize a protein fragment-based approach, while for sequence design of the de novo interface, a comparison of knowledge-based and machine learning protocols highlights the power and increased experimental success achieved using ProteinMPNN...
March 19, 2024: Structure
https://read.qxmd.com/read/38512252/postconcussive-symptoms-after-early-childhood-concussion
#14
MULTICENTER STUDY
Dominique Dupont, Ken Tang, Cindy Beaudoin, Fanny Dégeilh, Isabelle Gagnon, Keith Owen Yeates, Sean C Rose, Jocelyn Gravel, Brett Burstein, Antonia S Stang, Rachel M Stanley, Roger L Zemek, Miriam H Beauchamp
IMPORTANCE: Research on postconcussive symptoms (PCS) following early childhood concussion has been hindered by a lack of measures suitable for this age group, resulting in a limited understanding of their evolution in young children. OBJECTIVE: To document PCS in the first 3 months after early childhood concussion using a developmentally appropriate measure. DESIGN, SETTING, AND PARTICIPANTS: This cohort study used data collected at 3 Canadian and 1 US urban pediatric emergency departments (EDs) and 8 Canadian daycares from December 2018 to December 2022 as part of the Kids' Outcomes and Long-Term Abilities (KOALA) project, a prospective, multicenter, longitudinal cohort study...
March 4, 2024: JAMA Network Open
https://read.qxmd.com/read/38504644/is-psychological-resilience-associated-with-changes-in-youth-sport-participants-health-related-quality-of-life-during-the-covid-19-pandemic
#15
JOURNAL ARTICLE
Carolyn T Graham, Heather A Shepherd, Olivia Galea, Daniel C Kopala-Sibley, Carolyn A Emery, Keith Owen Yeates
Objectives: This study investigated the quality of life of youth sport participants over the COVID-19 pandemic as moderated by psychological resilience. Methods: Participants included 93 high school sport participants (53.76% female, mean age = 15.59 ± 0.74) in a three-year longitudinal cohort study (SHRed Concussions) who completed the Connor-Davidson Resilience Scale (CD-RISC), Pediatric Quality of Life Scale (PedsQL), and Strengths and Difficulties Questionnaire (SDQ) at Year 1 (pre-pandemic, 2019-2020) and Year 2 (pandemic, 2020-2021)...
March 20, 2024: Journal of Child and Adolescent Mental Health
https://read.qxmd.com/read/38481293/efficacy-of-a-virtual-reality-based-cognitive-interactive-training-program-for-children-with-traumatic-brain-injuries-study-protocol-for-a-parallel-group-randomized-controlled-trial
#16
JOURNAL ARTICLE
Jiabin Shen, Yan Wang, Susan Quinn, Stacy J Suskauer, Julia Birch, Tyler Busch, Adrian Svingos, Roger Crawfis, Keith Owen Yeates, H Gerry Taylor
BACKGROUND: Traumatic brain injury (TBI) is a leading cause of disability in children. Cognitive rehabilitation for this population is critical for their long-term health outcomes. This trial aims to evaluate the efficacy of a virtual reality-based program (VICT) for training executive functions in children with TBI. METHODS: A parallel group randomized controlled trial will be conducted among up to 32 children with TBI. Children in the intervention group will receive the VICT training while children in the control group will play a comparable VR game without executive function training...
March 13, 2024: Trials
https://read.qxmd.com/read/38481266/r2drv-study-protocol-for-longitudinal-assessment-of-driving-after-mild-tbi-in-young-drivers
#17
JOURNAL ARTICLE
Jingzhen Yang, Despina Stavrinos, Thomas Kerwin, Sylvie Mrug, Michael Tiso, Benjamin McManus, Cameron G Wrabel, Christopher Rundus, Fangda Zhang, Drew Davis, Erin M Swanson, Brett Bentley, Keith Owen Yeates
BACKGROUND: Mild traumatic brain injury (mTBI) and traffic-related injuries are two major public health problems disproportionately affecting young people. Young drivers, whose driving skills are still developing, are particularly vulnerable to impaired driving due to brain injuries. Despite this, there is a paucity of research on how mTBI impacts driving and when it is safe to return to drive after an mTBI. This paper describes the protocol of the study, R2DRV, Longitudinal Assessment of Driving After Mild TBI in Young Drivers, which examines the trajectory of simulated driving performance and self-reported driving behaviors from acutely post-injury to symptom resolution among young drivers with mTBI compared to matched healthy drivers...
March 13, 2024: Injury Epidemiology
https://read.qxmd.com/read/38464160/designed-fluorescent-protein-cages-as-fiducial-markers-for-targeted-cell-imaging
#18
Morgan Gee, Kaiser Atai, Hilary A Coller, Todd O Yeates, Roger Castells-Graells
Understanding how proteins function within their cellular environments is essential for cellular biology and biomedical research. However, current imaging techniques exhibit limitations, particularly in the study of small complexes and individual proteins within cells. Previously, protein cages have been employed as imaging scaffolds to study purified small proteins using cryo-electron microscopy (cryo-EM). Here we demonstrate an approach to deliver designed protein cages - endowed with fluorescence and targeted binding properties - into cells, thereby serving as fiducial markers for cellular imaging...
March 1, 2024: bioRxiv
https://read.qxmd.com/read/38457314/do-preinjury-life-events-moderate-the-outcomes-of-mild-traumatic-brain-injuries-in-children-an-a-cap-study
#19
JOURNAL ARTICLE
Safira Dharsee, Ken Tang, Miriam H Beauchamp, William Craig, Quynh Doan, Stephen B Freedman, Jocelyn Gravel, Roger Zemek, Keith Owen Yeates
OBJECTIVE: To examine preinjury life events as moderators of postconcussive symptoms (PCS) and quality of life (QoL) in children with pediatric mild traumatic brain injury (mTBI) versus orthopedic injury (OI). METHODS: Participants were 633 children with mTBI and 334 with OI, ages 8-16.99, recruited from 5 pediatric emergency departments and followed for 6 months postinjury as part of a prospective cohort study. Preinjury life events were measured retrospectively using the Child and Adolescent Survey of Experiences, PCS using the Health and Behavior Inventory (HBI) and Post-Concussion Symptom Interview (PCS-I), and QoL using the Pediatric Quality of Life Inventory (PedsQL)...
March 8, 2024: Journal of Pediatric Psychology
https://read.qxmd.com/read/38451205/alphafold-assisted-structure-determination-of-a-bacterial-protein-of-unknown-function-using-x-ray-and-electron-crystallography
#20
JOURNAL ARTICLE
Justin E Miller, Matthew P Agdanowski, Joshua L Dolinsky, Michael R Sawaya, Duilio Cascio, Jose A Rodriguez, Todd O Yeates
Macromolecular crystallography generally requires the recovery of missing phase information from diffraction data to reconstruct an electron-density map of the crystallized molecule. Most recent structures have been solved using molecular replacement as a phasing method, requiring an a priori structure that is closely related to the target protein to serve as a search model; when no such search model exists, molecular replacement is not possible. New advances in computational machine-learning methods, however, have resulted in major advances in protein structure predictions from sequence information...
April 1, 2024: Acta Crystallographica. Section D, Structural Biology
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