keyword
https://read.qxmd.com/read/38652822/using-machine-learning-to-construct-the-blood-follicle-distribution-models-of-various-trace-elements-and-explore-the-transport-related-pathways-with-multiomics-data
#1
JOURNAL ARTICLE
Guohuan Zhang, Weinan Lin, Ning Gao, Changxin Lan, Mengyuan Ren, Lailai Yan, Bo Pan, Jia Xu, Bin Han, Ligang Hu, Yuanchen Chen, Tianxiang Wu, Lili Zhuang, Qun Lu, Bin Wang, Mingliang Fang
Permeabilities of various trace elements (TEs) through the blood-follicle barrier (BFB) play an important role in oocyte development. However, it has not been comprehensively described as well as its involved biological pathways. Our study aimed to construct a blood-follicle distribution model of the concerned TEs and explore their related biological pathways. We finally included a total of 168 women from a cohort of in vitro fertilization-embryo transfer conducted in two reproductive centers in Beijing City and Shandong Province, China...
April 23, 2024: Environmental Science & Technology
https://read.qxmd.com/read/38652750/organ-delimited-gene-regulatory-networks-provide-high-accuracy-in-candidate-transcription-factor-selection-across-diverse-processes
#2
JOURNAL ARTICLE
Rajeev Ranjan, Sonali Srijan, Somaiah Balekuttira, Tina Agarwal, Melissa Ramey, Madison Dobbins, Rachel Kuhn, Xiaojin Wang, Karen Hudson, Ying Li, Kranthi Varala
Organ-specific gene expression datasets that include hundreds to thousands of experiments allow the reconstruction of organ-level gene regulatory networks (GRNs). However, creating such datasets is greatly hampered by the requirements of extensive and tedious manual curation. Here, we trained a supervised classification model that can accurately classify the organ-of-origin for a plant transcriptome. This K-Nearest Neighbor-based multiclass classifier was used to create organ-specific gene expression datasets for the leaf, root, shoot, flower, and seed in Arabidopsis thaliana ...
April 30, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38652720/demand-forecasting-for-platelet-usage-from-univariate-time-series-to-multivariable-models
#3
JOURNAL ARTICLE
Maryam Motamedi, Jessica Dawson, Na Li, Douglas G Down, Nancy M Heddle
Platelet products are both expensive and have very short shelf lives. As usage rates for platelets are highly variable, the effective management of platelet demand and supply is very important yet challenging. The primary goal of this paper is to present an efficient forecasting model for platelet demand at Canadian Blood Services (CBS). To accomplish this goal, five different demand forecasting methods, ARIMA (Auto Regressive Integrated Moving Average), Prophet, lasso regression (least absolute shrinkage and selection operator), random forest, and LSTM (Long Short-Term Memory) networks are utilized and evaluated via a rolling window method...
2024: PloS One
https://read.qxmd.com/read/38652708/activities-of-daily-living-self-efficacy-and-motor-skill-related-fitness-and-the-interrelation-in-children-with-moderate-and-severe-developmental-coordination-disorder
#4
JOURNAL ARTICLE
Faiçal Farhat, Marisja Denysschen, Nourhen Mezghani, Mohamed Moncef Kammoun, Adnene Gharbi, Haithem Rebai, Wassim Moalla, Bouwien Smits-Engelsman
BACKGROUND: Children with Developmental Coordination Disorder (DCD) are diagnosed based on poor motor skills that impact their daily activities. However, this may also lead to lower predilection and participation in physical activities and a higher risk to develop health problems. OBJECTIVE: To determine motor skill related levels in children with moderate and severe DCD and compare that to typically developing children (TD). The study also aimed to determine the level of activities of daily living (ADL) as reported by their parent and self-efficacy as reported by the children...
2024: PloS One
https://read.qxmd.com/read/38652675/the-formation-of-negative-attitudes-toward-novel-groups
#5
JOURNAL ARTICLE
Johanna Woitzel, Hans Alves
People perceive out-groups, minorities, and novel groups more negatively than in-groups, majorities, and familiar groups. Previous research has argued that such intergroup biases may be caused by the order in which people typically encounter social groups. Groups that are relatively novel to perceivers (e.g., out-groups, minorities) are primarily associated with distinct attributes that differentiate them from familiar groups. Because distinct attributes are typically negative, attitudes toward novel groups are negatively biased...
April 23, 2024: Psychological Science
https://read.qxmd.com/read/38652661/systematic-characterization-of-multi-omics-landscape-between-gut-microbial-metabolites-and-gpcrome-in-alzheimer-s-disease
#6
JOURNAL ARTICLE
Yunguang Qiu, Yuan Hou, Dhruv Gohel, Yadi Zhou, Jielin Xu, Marina Bykova, Yuxin Yang, James B Leverenz, Andrew A Pieper, Ruth Nussinov, Jessica Z K Caldwell, J Mark Brown, Feixiong Cheng
Shifts in the magnitude and nature of gut microbial metabolites have been implicated in Alzheimer's disease (AD), but the host receptors that sense and respond to these metabolites are largely unknown. Here, we develop a systems biology framework that integrates machine learning and multi-omics to identify molecular relationships of gut microbial metabolites with non-olfactory G-protein-coupled receptors (termed the "GPCRome"). We evaluate 1.09 million metabolite-protein pairs connecting 408 human GPCRs and 335 gut microbial metabolites...
April 21, 2024: Cell Reports
https://read.qxmd.com/read/38652595/application-of-a-novel-deep-learning-based-3d-videography-workflow-to-bat-flight
#7
JOURNAL ARTICLE
Jonas Håkansson, Brooke L Quinn, Abigail L Shultz, Sharon M Swartz, Aaron J Corcoran
Studying the detailed biomechanics of flying animals requires accurate three-dimensional coordinates for key anatomical landmarks. Traditionally, this relies on manually digitizing animal videos, a labor-intensive task that scales poorly with increasing framerates and numbers of cameras. Here, we present a workflow that combines deep learning-powered automatic digitization with filtering and correction of mislabeled points using quality metrics from deep learning and 3D reconstruction. We tested our workflow using a particularly challenging scenario: bat flight...
April 23, 2024: Annals of the New York Academy of Sciences
https://read.qxmd.com/read/38652347/transfer-learning-and-self-distillation-for-automated-detection-of-schizophrenia-using-single-channel-eeg-and-scalogram-images
#8
JOURNAL ARTICLE
Mohammadreza Mostafavi, Seok-Bum Ko, Shahriar Baradaran Shokouhi, Ahmad Ayatollahi
Schizophrenia (SZ) has been acknowledged as a highly intricate mental disorder for a long time. In fact, individuals with SZ experience a blurred line between fantasy and reality, leading to a lack of awareness about their condition, which can pose significant challenges during the treatment process. Due to the importance of the issue, timely diagnosis of this illness can not only assist patients and their families in managing the condition but also enable early intervention, which may help prevent its advancement...
April 23, 2024: Physical and engineering sciences in medicine
https://read.qxmd.com/read/38652301/diagnostic-accuracy-of-artificial-intelligence-assisted-clinical-imaging-in-the-detection-of-oral-potentially-malignant-disorders-and-oral-cancer-a-systematic-review-and-meta-analysis
#9
JOURNAL ARTICLE
JingWen Li, Wai Ying Kot, Colman Patrick McGrath, Bik Wan Amy Chan, Joshua Wing Kei Ho, Li Wu Zheng
BACKGROUND: The objective of this study is to examine the application of AI algorithms in detecting OPMD and oral cancerous lesions, and to evaluate the accuracy variations among different imaging tools employed in these diagnostic processes. MATERIALS AND METHODS: A systematic search was conducted in four databases: Embase, Web of Science, PubMed, and Scopus. The inclusion criteria included studies using machine learning algorithms to provide diagnostic information on specific oral lesions, prospective or retrospective design, and inclusion of OPMD...
April 23, 2024: International Journal of Surgery
https://read.qxmd.com/read/38652057/state-of-the-science-prolonged-exposure-therapy-for-the-treatment-of-posttraumatic-stress-disorder
#10
JOURNAL ARTICLE
Carmen P McLean, Edna B Foa
Prolonged exposure therapy (PE) is a well-established first-line treatment for posttraumatic stress disorder (PTSD) that is based on emotional processing theory. PE has been rigorously evaluated and tested in a large number of clinical trials in many countries covering a wide range of trauma populations. In this review, we summarize the evidence base supporting the efficacy of PE across populations, including adults with sexual assault-related PTSD and mixed trauma-related PTSD, military populations, and adolescents...
April 23, 2024: Journal of Traumatic Stress
https://read.qxmd.com/read/38651962/-the-revolution-of-ai-in-drug-development
#11
JOURNAL ARTICLE
Philippe Moingeon, Christiane Garbay, Muriel Dahan, Irène Fermont, Ali Benmakhlouf, Alain Gouyette, Pierre Poitou, Alain Saint-Pierre
Artificial intelligence and machine learning enable the construction of predictive models, which are currently used to assist in decision-making throughout the process of drug discovery and development. These computational models can be used to represent the heterogeneity of a disease, identify therapeutic targets, design and optimize drug candidates, and evaluate the efficacy of these drugs on virtual patients or digital twins. By combining detailed patient characteristics with the prediction of potential drug-candidate properties, artificial intelligence promotes the emergence of a "computational" precision medicine, allowing for more personalized treatments, better tailored to patient specificities with the aid of such predictive models...
April 2024: Médecine Sciences: M/S
https://read.qxmd.com/read/38651949/biliqml-a-supervised-machine-learning-model-to-quantify-biliary-forms-from-digitized-whole-slide-liver-histopathological-images
#12
JOURNAL ARTICLE
Dominick J Hellen, Meredith E Fay, David H Lee, Caroline Klindt-Morgan, Ashley Bennett, Kimberly J Pachura, Arash Grakoui, Stacey S Huppert, Paul A Dawson, Wilbur A Lam, Saul J Karpen
The progress of research focused on cholangiocytes and the biliary tree during development and following injury is hindered by limited available quantitative methodologies. Current techniques include two-dimensional standard histological cell-counting approaches, which are rapidly performed error-prone and lack architectural context; or three-dimensional analysis of the biliary tree in opacified livers, which introduce technical issues along with minimal quantitation. The present study aims to fill these quantitative gaps with a supervised machine learning model (BiliQML) able to quantify biliary forms in the liver of anti-Keratin 19 antibody-stained whole slide images...
April 23, 2024: American Journal of Physiology. Gastrointestinal and Liver Physiology
https://read.qxmd.com/read/38650908/the-asymmetric-impact-of-decision-making-confidence-on-regret-and-relief
#13
JOURNAL ARTICLE
Zan Liu
When individuals make uncertain decisions, they often evaluate the correctness of their choices in what is referred to as decision-making confidence. The outcomes of such decision-making can lead to counterfactual thinking wherein alternative possible outcomes are contemplated. This, in turn, can elicit counterfactual emotions including upward and downward counterfactual thinking, which, respectively, refer to regret and relief. Decision-making confidence and counterfactual emotions have key effects on how individuals learn from the past and prepare for the future...
2024: Frontiers in Psychology
https://read.qxmd.com/read/38650905/focus-of-attention-in-musical-learning-and-music-performance-a-systematic-review-and-discussion-of-focus-instructions-and-outcome-measures
#14
REVIEW
Jesper Hohagen, Anna Immerz
The topic of attentional focus (focus of attention, FOA) in musical learning and performance has recently received increasing interest, as the growing number of empirical studies inspired by the established FOA paradigm in sports by Wulf and colleagues in 1998. The current systematical review aims at collecting, abstracting, and categorizing relevant data to show which kinds of FOA instructions were applied in experimental designs and what kinds of dependent variables were used to measure the effects of FOA instruction on musical performance...
2024: Frontiers in Psychology
https://read.qxmd.com/read/38650723/predicting-anxiety-depression-and-insomnia-among-bangladeshi-university-students-using-tree-based-machine-learning-models
#15
JOURNAL ARTICLE
Arman Hossain Chowdhury, Dana Rad, Md Siddikur Rahman
BACKGROUND AND AIMS: Mental health problem is a rising public health concern. People of all ages, specially Bangladeshi university students, are more affected by this burden. Thus, the objective of the study was to use tree-based machine learning (ML) models to identify major risk factors and predict anxiety, depression, and insomnia in university students. METHODS: A social media-based cross-sectional survey was employed for data collection. We used Generalized Anxiety Disorder (GAD-7), Patient Health Questionnaire (PHQ-9) and Insomnia Severity Index (ISI-7) scale for measuring students' anxiety, depression and insomnia problems...
April 2024: Health Science Reports
https://read.qxmd.com/read/38650448/advance-in-applications-of-artificial-intelligence-algorithms-in-cancer-related-mirna-research
#16
JOURNAL ARTICLE
Hongyu Lu, Jia Zhang, Yixin Cao, Shuming Wu, Xingyan Wang, Yurong Bai, Chang Zhao, Jun Zhu, Yuan Wei, Runting Yin
MiRNAs are a class of small non-coding RNAs, which regulate gene expression post-transcriptionally by partial complementary base pairing. Aberrant miRNA expressions have been reported in tumor tissues and peripheral blood of cancer patients. Bioinformatic tools could improve efficiency of miRNA research, while current bioinformatic tools are in lack of sufficient accuracy. In recent years, artificial intelligence algorithms such as machine learning and deep learning have been widely used in the bioinformatical tools...
April 16, 2024: Zhejiang da Xue Xue Bao. Yi Xue Ban, Journal of Zhejiang University. Medical Sciences
https://read.qxmd.com/read/38649995/best-practice-transfer-by-public-health-nurses-in-japan-actual-conditions-and-related-factors
#17
JOURNAL ARTICLE
Mana Fujioka, Reiko Okamoto, Keiko Miyamoto, Keiko Koide, Masako Kageyama, Kazuko Saeki, Kazue Hirokane, Fusami Nagano, Shinji Takemura
BACKGROUND: The workload of public health nurses (PHNs) working for local governments has been increasing as health issues become more diverse and complicated. Even amidst the ongoing administrative and fiscal reforms, there is an urgent need to ensure how effectively and efficiently public health nurses can practice in health service development. The objective of this research was to clarify the actual conditions of best practice transfer (BPT) and its related factors. METHODS: An anonymous postal and self-administered questionnaire survey was conducted among PHNs working at 334 sites, including the local government offices and health centers across Japan, and analysed mainly through logistic regression analysis...
April 22, 2024: BMC Nursing
https://read.qxmd.com/read/38649933/a-comprehensive-study-of-modified-three-month-pediatrics-training-curriculum-at-shahid-beheshti-university-of-medical-sciences-and-its-impact-on-student-satisfaction
#18
JOURNAL ARTICLE
Amirhossein Hosseini, Mobina Fathi, Nahid Saadati, Koroush Vahidshahi, Mohammadmahdi Nasehi, Fereshteh Karbasian, Aliakbar Sayyari, Fatemeh Malek, Mahmoud Hajipour
OBJECTIVES: Continuous curriculum improvements reveal the dedication of policy-makers to raising the quality of education and student learning. This study aims to report the impact of curriculum changes to the three-month pediatric course curriculum at Shahid Beheshti University of Medical Sciences (SBMU) on the satisfaction levels of medical students. METHODS: One hundred eighteen 4th -5th years medical students, who had completed their pediatric clinical rotation in SBMU-affiliated teaching hospitals including Mofid Children Hospital, Loghman Hakim Hospital, Shohada-e-Tajrish Hospital, and Imam Hossein Hospital from January to December 2022 were included in this cross-sectional study...
April 22, 2024: BMC Medical Education
https://read.qxmd.com/read/38649764/will-ai-accelerate-or-delay-the-race-to-net-zero-emissions
#19
Amy Luers, Jonathan Koomey, Eric Masanet, Owen Gaffney, Felix Creutzig, Juan Lavista Ferres, Eric Horvitz
No abstract text is available yet for this article.
April 2024: Nature
https://read.qxmd.com/read/38649727/experimental-study-and-machine-learning-modeling-of-water-removal-efficiency-from-crude-oil-using-demulsifier
#20
JOURNAL ARTICLE
H H Hashem, T Kikhavani, M A Moradkhani
This study deals with the investigation of the water removal efficiency (WRE) from crude oil using a commercial demulsifier. The impacts of time, demulsifier concentration, and temperature on WRE were experimentally studied. The results implied the fact that temperature plays a substantial role in the demulsification and has a direct correlation with WRE. In addition, while increasing the concentration up to 40 ppm contributed to reaching a higher WRE, it did not have positive effects on efficiency at higher concentrations (overdose) and just led to more demulsifier consumption...
April 22, 2024: Scientific Reports
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