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https://www.readbyqxmd.com/read/28587194/cross-kingdom-regulation-of-putative-mirnas-derived-from-happy-tree-in-cancer-pathway-a-systems-biology-approach
#1
Dinesh Kumar, Swapnil Kumar, Garima Ayachit, Shivarudrappa B Bhairappanavar, Afzal Ansari, Priyanka Sharma, Subhash Soni, Jayashankar Das
MicroRNAs (miRNAs) are well-known key regulators of gene expression primarily at the post-transcriptional level. Plant-derived miRNAs may pass through the gastrointestinal tract, entering into the body fluid and regulate the expression of endogenous mRNAs. Camptotheca acuminata, a highly important medicinal plant known for its anti-cancer potential was selected to investigate cross-kingdom regulatory mechanism and involvement of miRNAs derived from this plant in cancer-associated pathways through in silico systems biology approach...
June 3, 2017: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/28507338/impact-of-trace-minerals-on-wound-healing-of-footpad-dermatitis-in-broilers
#2
Juxing Chen, Guillermo Tellez, Jeffery Escobar, Mercedes Vazquez-Anon
Footpad dermatitis (FPD) is used in the poultry industry as an animal welfare criterion to determine stocking density. Trace minerals (TM) play a role in skin integrity and wound healing. This study evaluated the impact of TM on FPD and consisted of 3 treatments supplemented with 0 (NTM), low (LTM) and high (HTM) TM levels in the same basal diet. On d21, 71% birds in all treatments developed mild FPD and pens were top-dressed with dry litter to promote FPD healing. Compared to NTM, LTM reduced area under the curve (AUC) of FPD lesion scores during d21-42, HTM reduced the AUC of FPD lesion scores during d7-21 and d21-42...
May 15, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28370062/simultaneous-genotyping-of-human-platelet-alloantigen-1-to-28bw-systems-by-multiplex-polymerase-chain-reaction-sequence-based-typing
#3
X Hong, S Chen, Y Ying, Y Liu, X Xu, J He, F Zhu
BACKGROUND AND OBJECTIVES: Human platelet alloantigen (HPA) genotyping is important for the diagnosis and prevention the alloimmune platelet disorders. In this study, a simultaneous genotyping method for HPA-1 to -28bw systems was established using multiplex PCR-SBT and the frequencies of genotypes and alleles of HPA-1 to -28bw systems in the Zhejiang Han population were analysed. MATERIALS AND METHODS: The specific primers were designed according to the nucleotide sequences of HPA-1 to 28bw systems which are located in ITGB3, GP1BA, ITGA2B, ITGA2, GP1BB and CD109, respectively...
March 31, 2017: Vox Sanguinis
https://www.readbyqxmd.com/read/28358707/polymorphisms-of-platelet-glycoprotein-receptors-and-cell-adhesion-molecules-in-fetuses-with-fetal-growth-restriction-and-their-mothers-as-detected-with-pyrosequencing
#4
Maria Simou, Evaggelia Kouskouni, Nikolaos Vitoratos, Emmanuel Economou, George Creatsas
BACKGROUND: Vascular thrombotic tendency may lead to fetal growth restriction (FGR). Altered platelet function and genetic heterogeneity may play a role in this procedure. We investigated whether maternal or fetal genotypic frequencies of genes polymorphisms for certain platelet receptor and cell adhesion molecules are altered in FGR. MATERIALS AND METHODS: We compared the maternal and fetal genotypic frequencies of single nucleotide polymorphisms (SNPs) in four genes coding for platelet receptors and cell adhesion molecules [integrin alpha subunit 2 (ITGA2)C807T, integrin subunit beta 3(ITGB3) T1565C, platelet cell adhesion protein 1 (PECAM1) CTG-GTG and selectin P(SELP)A/C]...
March 2017: In Vivo
https://www.readbyqxmd.com/read/28119367/hmga2-foxl2-axis-regulates-metastases-and-epithelial-to-mesenchymal-transition-of-chemo-resistant-gastric-cancer
#5
Jiaqiang Dong, Rui Wang, Gui Ren, Xiaowei Li, Jingbo Wang, Yi Sun, Jie Liang, Yongzan Nie, Kaichun Wu, Bin Feng, Yulong Shang, Daiming Fan
Purpose Chemo-resistance is the main cause of treatment failure in cancer and is associated with distant metastases and epithelial-to-mesenchymal transition (EMT). This study aimed to explore the mechanism of metastases and EMT in chemo-resistant gastric cancer (GC). Experimental Design A key molecular pathway was identified via gene profiling and a bioinformatic analysis in a chemo-resistant GC model. The roles of FOXL2, HMGA2 and ITGA2 were validated via loss-of-function and gain-of-function experiments in vitro and in an orthotopic GC animal model...
January 24, 2017: Clinical Cancer Research: An Official Journal of the American Association for Cancer Research
https://www.readbyqxmd.com/read/27833078/dapper-homolog-1-alpha-suppresses-metastasis-ability-of-gastric-cancer-through-inhibiting-planar-cell-polarity-pathway
#6
Yuegeng Liu, Jingwan Zhang, Weifang Yu, Xiaoming Zhang, Guiqi Wang, Zengren Zhao
Dapper homolog 1 alpha (DACT1α) is a member of DACT family and an important regulator in the planar cell polarity pathway. We aim to clarify its functional role in metastasis ability of gastric cancer. DACT1α was silenced in all gastric cancer cell lines (8/8), but expressed in normal gastric tissue. Ectopic expression of DACT1α in silenced gastric cancer cell lines (AGS, BGC823 and MGC803) by stable transfection significantly suppressed cancer cell spreading (P < 0.05), migration (P < 0.01) and invasion (P < 0...
December 6, 2016: Oncotarget
https://www.readbyqxmd.com/read/27765911/integrin-%C3%AE-2%C3%AE-1-inhibits-mst1-kinase-phosphorylation-and-activates-yes-associated-protein-oncogenic-signaling-in-hepatocellular-carcinoma
#7
Kwong-Fai Wong, Angela M Liu, Wanjin Hong, Zhi Xu, John M Luk
The Hippo pathway regulates the down-stream target Yes-associated protein (YAP) to maintain organ homeostasis, which is commonly inactivated in many types of cancers. However, how cell adhesion dysregulates the Hippo pathway activating YAP oncogene in hepatocellular carcinoma (HCC) remains unclear. Our findings demonstrate that α2β1 integrin (but not other β1 integrins) expressed in HCC cells, after binding to collagen extracellular matrix, could inhibit MST1 kinase phosphorylation and activate YAP pro-oncogenic activities...
November 22, 2016: Oncotarget
https://www.readbyqxmd.com/read/27759448/toward-optimal-set-of-single-nucleotide-polymorphism-investigation-before-ivf
#8
A V Ivanov, A G Dedul, Y N Fedotov, E V Komlichenko
BACKGROUND: At present, the patient preparation for IVF needs to undergo a series of planned tests, including the genotyping of single nucleotide polymorphism (SNP) alleles of some genes. In former USSR countries, such investigation was not included in overwhelming majority of health insurance programs and paid by patient. In common, there are prerequisites to the study of more than 50 polymorphisms. An important faced task is to determine the optimal panel for SNP genotyping in terms of price/number of SNP...
October 2016: Gynecological Endocrinology
https://www.readbyqxmd.com/read/27301358/cytochrome-p450-1b1-contributes-to-the-development-of-angiotensin-ii-induced-aortic-aneurysm-in-male-apoe-mice
#9
Shyamala Thirunavukkarasu, Nayaab S Khan, Chi Young Song, Hafiz U Ghafoor, David D Brand, Frank J Gonzalez, Kafait U Malik
Cytochrome P450 (CYP) 1B1 is implicated in vascular smooth muscle cell migration, proliferation, and hypertension. We assessed the contribution of CYP1B1 to angiotensin (Ang) II-induced abdominal aortic aneurysm (AAA). Male Apoe(-/-)/Cyp1b1(+/+) and Apoe(-/-)/Cyp1b1(-/-) mice were infused with Ang II or its vehicle for 4 weeks; another group of Apoe(-/-)/Cyp1b1(+/+) mice was coadministered the CYP1B1 inhibitor 2,3',4,5'-tetramethoxystilbene (TMS) every third day for 4 weeks. On day 28 of Ang II infusion, AAAs were analyzed by ultrasound and ex vivo by Vernier calipers, mice were euthanized, and tissues were harvested...
August 2016: American Journal of Pathology
https://www.readbyqxmd.com/read/27225591/gene-and-microrna-expression-are-predictive-of-tumor-response-in-rectal-adenocarcinoma-patients-treated-with-preoperative-chemoradiotherapy
#10
Caterina Millino, Isacco Maretto, Beniamina Pacchioni, Maura Digito, Antonino De Paoli, Vincenzo Canzonieri, Edoardo D'Angelo, Marco Agostini, Flavio Rizzolio, Antonio Giordano, Andrea Barina, Senthilkumar Rajendran, Giovanni Esposito, Gerolamo Lanfranchi, Donato Nitti, Salvatore Pucciarelli
Preoperative chemoradiotherapy (pCRT) followed by surgery is the standard treatment for locally advanced rectal cancer (LARC). However, tumor response to pCRT is not uniform, and there are no effective predictive methods. This study investigated whether specific gene and miRNA expression are associated with tumor response to pCRT. Tissue biopsies were obtained from patients before pCRT and resection. Gene and miRNA expression were analyzed using a one-color microarray technique that compares signatures between responders (R) and non-responders (NR), as measured based on tumor regression grade...
February 2017: Journal of Cellular Physiology
https://www.readbyqxmd.com/read/27186316/mir-128-modulates-hepatocellular-carcinoma-by-inhibition-of-itga2-and-itga5-expression-retraction
#11
(no author information available yet)
[This retracts the article on p. 1564 in vol. 7, PMID: 26550456.].
2016: American Journal of Translational Research
https://www.readbyqxmd.com/read/27094978/levels-of-human-platelet-derived-soluble-cd40-ligand-depend-on-haplotypes-of-cd40lg-cd40-itga2
#12
Chaker Aloui, Antoine Prigent, Sofiane Tariket, Caroline Sut, Jocelyne Fagan, Fabrice Cognasse, Tahar Chakroun, Olivier Garraud, Sandrine Laradi
Increased circulating soluble CD40 ligand (sCD40L) is commonly associated with inflammatory disorders. We aimed to investigate whether gene polymorphisms in CD40LG, CD40 and ITGA2 are associated with a propensity to secrete sCD40L; thus, we examined this issue at the level of human platelets, the principal source of sCD40L. We performed single polymorphism and haplotype analyses to test for the effect of twelve polymorphisms across the CD40LG, CD40 and ITGA2 genes in blood donors. ITGA2 presented a positive association with rs1126643, with a significant modification in sCD40L secretion (carriers of C allele, P =  0...
April 20, 2016: Scientific Reports
https://www.readbyqxmd.com/read/27093792/-mathematic-model-for-prediction-of-liver-fibrosis-progression-rate-in-patients-with-chronic-hepatitis-c-based-on-combination-of-genomic-markers
#13
L M Samokhodskaia, E E Starostina, E B Yarovaya, T N Krasnova, N A Mukhin, V A Tkachuk, V A Sadovnichy
AIM OF STUDY: To evaluate clinical significance of different combinations of gene polymorphisms IL-1b, IL-6, IL-10, TNF, HFE, TGF-b, ATR1, N0S3894, CYBA, AGT, MTHFR, FII, FV, FVII, FXIII, ITGA2, ITGB3, FBG, PAI and their prognostic value for prediction of liver fibrosis progression rate in patients with chronic hepatitis C (CHC). SUBJECTS AND METHODS: 118 patients with CHC were divided into "fast" and "slow" (fibrosis rate progression ≥ 0.13 and < 0.13 fibrosis units/yr; n = 64 and n = 54) fibrosis groups...
2015: Vestnik Rossiĭskoĭ Akademii Meditsinskikh Nauk
https://www.readbyqxmd.com/read/27067054/dynamics-of-protein-expression-reveals-primary-targets-and-secondary-messengers-of-estrogen-receptor-alpha-signaling-in-mcf-7-breast-cancer-cells
#14
Andrei P Drabovich, Maria P Pavlou, Christina Schiza, Eleftherios P Diamandis
Estrogen receptor alpha (ERα)-mediated proliferation of breast cancer cells is facilitated through expression of multiple primary target genes, products of which induce a secondary response to stimulation. To differentiate between the primary and secondary target proteins of ERα signaling, we measured dynamics of protein expression induced by 17β-estradiol in MCF-7 breast cancer cells. Measurement of the global proteomic effects of estradiol by stable isotope labeling by amino acids in cell culture (SILAC) resulted in identification of 103 estrogen-regulated proteins, with only 40 of the corresponding genes having estrogen response elements...
June 2016: Molecular & Cellular Proteomics: MCP
https://www.readbyqxmd.com/read/26952511/rna-seq-analysis-for-the-potential-targets-and-molecular-mechanisms-of-17-%C3%AE-estradiol-in-squamous-cell-lung-carcinoma
#15
X Chen, R Wu, S Wang, Q Duan, Y Xuan
The efficacy of 17 β-estradiol (E2) was valid in some cancers, while its effects on squamous cell lung carcinoma (SCLC) were still unclear. The aim of our study was to investigate the potential targets and molecular mechanisms of E2 in SCLC cells.Two RNA libraries from human lung carcinoma cells (SK-MES-1) with and without E2 treatment were constructed and sequenced. The differentially expressed genes (DEGs) between cells with or without E2 treatment were identified by cuffdiff software. Hierarchical Clustering Analysis (HCA) was performed for displaying gene expression changes and classification...
2016: Neoplasma
https://www.readbyqxmd.com/read/26893747/identification-of-genes-and-signaling-pathways-associated-with-squamous-cell-carcinoma-by-bioinformatics-analysis
#16
L I Shen, Linbo Liu, Zhenyong Yang, Nan Jiang
The present study aimed to investigate the genes and signaling pathways associated with squamous cell carcinoma (SCC) by bioinformatics analysis. For this purpose, the GSE2503 was downloaded from the Gene Expression Omnibus database, and the differentially expressed genes (DEGs) between 6 normal skin and 5 SCC samples were analyzed using the Linear Models for Microarray Data package. Gene Ontology (GO) and pathway enrichment analysis of DEGs were performed, followed by functional annotation and construction of a protein-protein interaction (PPI) network...
February 2016: Oncology Letters
https://www.readbyqxmd.com/read/26853039/re-regulation-of-the-itga2-gene-by-epigenetic-mechanisms-in-prostate-cancer
#17
Anthony Atala
No abstract text is available yet for this article.
February 2016: Journal of Urology
https://www.readbyqxmd.com/read/26823071/static-mechanical-loading-influences-the-expression-of-extracellular-matrix-and-cell-adhesion-proteins-in-vaginal-cells-derived-from-premenopausal-women-with-severe-pelvic-organ-prolapse
#18
Hala Kufaishi, May Alarab, Harold Drutz, Stephen Lye, Oksana Shynlova
INTRODUCTION: Primary human vaginal cells derived from women with severe pelvic organ prolapse (POP-HVCs) demonstrate altered cellular characteristics as compared to cells derived from asymptomatic women (control-HVCs). Using computer-controllable Flexcell stretch unit, we examined whether POP-HVCs react differently to mechanical loading as compared to control-HVCs by the expression of extracellular matrix (ECM) components, cell-ECM adhesion proteins, and ECM degrading and maturating enzymes...
August 2016: Reproductive Sciences
https://www.readbyqxmd.com/read/26700675/microrna-128-inhibits-emt-of-human-osteosarcoma-cells-by-directly-targeting-integrin-%C3%AE-2
#19
Xinsheng Liu, Zhiyong Liang, Kehai Gao, Huazhuang Li, Guangzong Zhao, Shantao Wang, Jun Fang
Deregulated expression of miRNAs contributes to the development of osteosarcoma. The present study was to evaluate the level of miR-128 and integrin α2 (ITGA2) in osteosarcoma tissues and cells. We further investigated the molecular mechanisms of miR-128 and ITGA2 in osteosarcoma cell lines. In the present study, we found that miR-128 expression was down-regulated in osteosarcoma tissues and MG-63, U2OS, and SAOS-2 cells (all p < 0.001). By contrast, ITGA2 was up-regulated. Furthermore, we found that miR-128 overexpression suppressed cell migration and invasion of MG-63 cells...
June 2016: Tumour Biology: the Journal of the International Society for Oncodevelopmental Biology and Medicine
https://www.readbyqxmd.com/read/26688386/proteome-profiles-of-hdl-particles-of-patients-with-chronic-heart-failure-are-associated-with-immune-response-and-also-include-bacteria-proteins
#20
Andreas Oberbach, Volker Adams, Nadine Schlichting, Marco Heinrich, Yvonne Kullnick, Stefanie Lehmann, Sven Lehmann, Stefan Feder, Joao Carlos Correia, Friedrich-Wilhelm Mohr, Uwe Völker, Nico Jehmlich
Besides modulation of reverse cholesterol transport, high density lipoprotein (HDL) is able to modulate vascular function by stimulating endothelial nitric oxide synthase. Recently, it could be documented that this function of HDL was significantly impaired in patients with chronic heart failure (CHF). We investigated alterations in the HDL proteome in CHF patients. Therefore, HDL was isolated from 5 controls (HDLhealthy) and 5 CHF patients of NYHA-class IIIb (HDLCHF). Proteome analysis of HDL particles was performed by two-dimensional liquid chromatography-mass spectrometry (SCX/RP LC-MS/MS)...
January 30, 2016: Clinica Chimica Acta; International Journal of Clinical Chemistry
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