keyword
https://read.qxmd.com/read/38652761/tnf-%C3%AE-signals-through-itk-akt-mtor-to-drive-cd4-t-cell-metabolic-reprogramming-which-is-dysregulated-in-rheumatoid-arthritis
#1
JOURNAL ARTICLE
Emma L Bishop, Nancy Gudgeon, Taylor Fulton-Ward, Victoria Stavrou, Jennie Roberts, Adam Boufersaoui, Daniel A Tennant, Martin Hewison, Karim Raza, Sarah Dimeloe
Upon activation, T cells undergo metabolic reprogramming to meet the bioenergetic demands of clonal expansion and effector function. Because dysregulated T cell cytokine production and metabolic phenotypes coexist in chronic inflammatory disease, including rheumatoid arthritis (RA), we investigated whether inflammatory cytokines released by differentiating T cells amplified their metabolic changes. We found that tumor necrosis factor-α (TNF-α) released by human naïve CD4+ T cells upon activation stimulated the expression of a metabolic transcriptome and increased glycolysis, amino acid uptake, mitochondrial oxidation of glutamine, and mitochondrial biogenesis...
April 23, 2024: Science Signaling
https://read.qxmd.com/read/38640534/dynamic-changes-of-key-metabolites-in-longjing-green-tea-during-processing-revealed-by-widely-targeted-metabolomic-profiling-and-sensory-experiments
#2
JOURNAL ARTICLE
Lin Zeng, Yan-Qing Fu, Ying Gao, Fang Wang, Shuang Liang, Jun-Feng Yin, Marie-Laure Fauconnier, Lijing Ke, Yong-Quan Xu
In this study, widely targeted metabolomics and chemometrics were utilized to comprehensively analyse the formation of taste compounds in Longjing green tea. A total of 580 non-volatile metabolites were identified by using ultra-performance liquid chromatography-electrospray ionization-tandem mass spectrometry, and alterations in three metabolic pathways were investigated. Notably, the fixation process reduced phosphatidic acid levels, resulting in the formation of lyso-phosphatidylcholine and lyso-phosphatidylethanolamine, as well as the release of esterified polyunsaturated fatty acids...
April 15, 2024: Food Chemistry
https://read.qxmd.com/read/38634760/exploring-the-mechanisms-behind-non-aromatic-fluorescence-with-the-density-functional-tight-binding-method
#3
JOURNAL ARTICLE
Gonzalo Díaz Mirón, Carlos R Lien-Medrano, Debarshi Banerjee, Uriel N Morzan, Michael A Sentef, Ralph Gebauer, Ali Hassanali
Recent experimental findings reveal nonconventional fluorescence emission in biological systems devoid of conjugated bonds or aromatic compounds, termed non-aromatic fluorescence (NAF). This phenomenon is exclusive to aggregated or solid states and remains absent in monomeric solutions. Previous studies focused on small model systems in vacuum show that the carbonyl stretching mode along with strong interaction of short hydrogen bonds (SHBs) remains the primary vibrational mode explaining NAF in these systems...
April 18, 2024: Journal of Chemical Theory and Computation
https://read.qxmd.com/read/38618506/a-simple-high-yield-technique-for-isolation-of-wharton-s-jelly-derived-mesenchymal-stem-cell
#4
JOURNAL ARTICLE
Bahare Niknam, Arezou Azizsoltani, Neda Heidari, Samaneh Tokhanbigli, Helia Alavifard, Mahsa Haji Valili, Davar Amani, Hamid Asadzadeh Aghdaei, Seyed Mahmoud Hashemi, Kaveh Baghaei
BACKGROUND: The isolation of Mesenchymal Stem Cells (MSCs) from various tissues is possible, with the umbilical cord emerging as a competitive alternative to bone marrow. In order to fulfill the demands of cell therapy, it is essential to generate stem cells on a clinical scale while minimizing time, cost, and contamination. Here is a simple and effective protocol for isolating MSC from Wharton's Jelly (WJ-MSC) using the explant method with various supplements. METHODS: Utilizing the explant method, small fragments of Wharton's jelly from the human umbilical cord were cultured in a flask...
2024: Avicenna Journal of Medical Biotechnology
https://read.qxmd.com/read/38617453/washed-microbiota-transplantation-for-crohn-s-disease-a-metagenomic-metatranscriptomic-and-metabolomic-based-study
#5
JOURNAL ARTICLE
Shi-Ju Chen, Da-Ya Zhang, Xia Wu, Fa-Ming Zhang, Bo-Ta Cui, Yi-Hao Huang, Zu-Lun Zhang, Rui Wang, Fei-Hu Bai
BACKGROUND: Fecal microbiota transplantation (FMT) is a promising therapeutic approach for treating Crohn's disease (CD). The new method of FMT, based on the automatic washing process, was named as washed microbiota transplantation (WMT). Most existing studies have focused on observing the clinical phenomena. However, the mechanism of action of FMT for the effective management of CD-particularly in-depth multi-omics analysis involving the metagenome, metatranscriptome, and metabolome-has not yet been reported...
March 21, 2024: World Journal of Gastroenterology: WJG
https://read.qxmd.com/read/38617195/safety-evaluation-of-the-food-enzyme-glutaminase-from-the-genetically-modified-bacillus-licheniformis-strain-nzym-jq
#6
JOURNAL ARTICLE
Claude Lambré, José Manuel Barat Baviera, Claudia Bolognesi, Pier Sandro Cocconcelli, Riccardo Crebelli, David Michael Gott, Konrad Grob, Evgenia Lampi, Marcel Mengelers, Alicja Mortensen, Gilles Rivière, Inger-Lise Steffensen, Christina Tlustos, Henk Van Loveren, Laurence Vernis, Holger Zorn, Yrjö Roos, Magdalena Andryszkiewicz, Ana Criado, Ana Gomes, Yi Liu, Daniele Cavanna, Giulio di Piazza, Andrew Chesson
The food enzyme glutaminase (l-glutamine amidohydrolase EC 3.5.1.2) is produced with the genetically modified Bacillus licheniformis strain NZYM-JQ by Novozymes A/S. The genetic modifications do not give rise to safety concerns. The production strain met the requirements for the qualified presumption of safety (QPS). The food enzyme is free from viable cells of the production organism and its DNA. The enzyme under assessment is intended to be used in six food manufacturing processes. Dietary exposure was estimated to be up to 0...
April 2024: EFSA journal
https://read.qxmd.com/read/38612489/the-probiotic-lactobacillus-reuteri-preferentially-synthesizes-kynurenic-acid-from-kynurenine
#7
JOURNAL ARTICLE
Robert Schwarcz, Ann Foo, Korrapati V Sathyasaikumar, Francesca M Notarangelo
The gut-brain axis is increasingly understood to play a role in neuropsychiatric disorders. The probiotic bacterium Lactobacillus (L.) reuteri and products of tryptophan degradation, specifically the neuroactive kynurenine pathway (KP) metabolite kynurenic acid (KYNA), have received special attention in this context. We, therefore, assessed relevant features of KP metabolism, namely, the cellular uptake of the pivotal metabolite kynurenine and its conversion to its primary products KYNA, 3-hydroxykynurenine and anthranilic acid in L...
March 26, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38600504/the-discovery-of-regional-neurotoxicity-associated-metabolic-alterations-induced-by-carbon-quantum-dots-in-brain-of-mice-using-a-spatial-metabolomics-analysis
#8
JOURNAL ARTICLE
Min Chen, Siyuan Chen, Xinyu Wang, Zongjian Ye, Kehan Liu, Yijing Qian, Meng Tang, Tianshu Wu
BACKGROUND: Recently, carbon quantum dots (CQDs) have been widely used in various fields, especially in the diagnosis and therapy of neurological disorders, due to their excellent prospects. However, the associated inevitable exposure of CQDs to the environment and the public could have serious severe consequences limiting their safe application and sustainable development. RESULTS: In this study, we found that intranasal treatment of 5 mg/kg BW (20 µL/nose of 0...
April 10, 2024: Particle and Fibre Toxicology
https://read.qxmd.com/read/38598436/structural-bioinformatics-studies-of-glutamate-transporters-and-their-alphafold2-predicted-water-soluble-qty-variants-and-uncovering-the-natural-mutations-of-l-q-i-t-f-y-and-q-l-t-i-and-y-f
#9
JOURNAL ARTICLE
Alper Karagöl, Taner Karagöl, Eva Smorodina, Shuguang Zhang
Glutamate transporters play key roles in nervous physiology by modulating excitatory neurotransmitter levels, when malfunctioning, involving in a wide range of neurological and physiological disorders. However, integral transmembrane proteins including the glutamate transporters remain notoriously difficult to study, due to their localization within the cell membrane. Here we present the structural bioinformatics studies of glutamate transporters and their water-soluble variants generated through QTY-code, a protein design strategy based on systematic amino acid substitutions...
2024: PloS One
https://read.qxmd.com/read/38593486/arabidopsis-cdf3-transcription-factor-increases-carbon-and-nitrogen-assimilation-and-yield-in-trans-grafted-tomato-plants
#10
JOURNAL ARTICLE
Begoña Renau-Morata, Eva Jiménez-Benavente, Daniel Gil-Villar, Jaime Cebolla-Cornejo, Gara Romero-Hernández, Laura Carrillo, Jesús Vicente-Carbajosa, Joaquín Medina, Rosa Victoria Molina, Sergio González Nebauer
Grafting in tomato (Solanum lycopersicum L.) has mainly been used to prevent damage by soil-borne pathogens and the negative effects of abiotic stresses, although productivity and fruit quality can also be enhanced using high vigor rootstocks. In the context of a low nutrients input agriculture, the grafting of elite cultivars onto rootstocks displaying higher Nitrogen Use Efficiency (NUE) supports a direct strategy for yield maximization. In this study we assessed the use of plants overexpressing the Arabidopsis (AtCDF3) or tomato (SlCDF3) CDF3 genes, previously reported to increase NUE in tomato, as rootstocks to improve yield in the grafted scion under low N inputs...
April 7, 2024: Plant Physiology and Biochemistry: PPB
https://read.qxmd.com/read/38586362/effect-of-the-dietary-supplement-permeaprotect-tolerance%C3%A2-on-gut-permeability-in-a-human-co-culture-epithelial-and-immune-cells-model
#11
JOURNAL ARTICLE
Anne Abot, Nicolas Pomié, Gwendoline Astre, Patrice D Cani, Justine Aussant, Emmanuel Barrat, Claude Knauf
BACKGROUND AND OBJECTIVE: The leaky gut syndrome is characterized by an intestinal hyperpermeability observed in multiple chronic disorders. Alterations of the gut barrier are associated with translocation of bacterial components increasing inflammation, oxidative stress and eventually dysfunctions of cellular interactions at the origin pathologies. Therapeutic and/or preventive approaches have to focus on the identification of novel targets to improve gut homeostasis. In this context, this study aims to identify the role of PERMEAPROTECT + TOLERANE©, known as PERMEA, a food complement composed of a combination of factors (including l-Glutamine) known to improve gut physiology...
April 15, 2024: Heliyon
https://read.qxmd.com/read/38585668/-1-h-and-31-p-magnetic-resonance-spectroscopy-reveals-potential-pathogenic-and-biomarker-metabolite-alterations-in-lafora-disease
#12
JOURNAL ARTICLE
Kimberly L Chan, Aparna Panatpur, Souad Messahel, Hamza Dahshi, Talon Johnson, Anke Henning, Jimin Ren, Berge A Minassian
Lafora disease is a fatal teenage-onset progressive myoclonus epilepsy and neurodegenerative disease associated with polyglucosan bodies. Polyglucosans are long-branched and as a result precipitation- and aggregation-prone glycogen. In mouse models, downregulation of glycogen synthase, the enzyme that elongates glycogen branches, prevents polyglucosan formation and rescues Lafora disease. Mouse work, however, has not yet revealed the mechanisms of polyglucosan generation, and few in vivo human studies have been performed...
2024: Brain communications
https://read.qxmd.com/read/38584284/danggui-sini-decoction-alleviates-oxaliplatin-induced-peripheral-neuropathy-by-regulating-gut-microbiota-and-potentially-relieving-neuroinflammation-related-metabolic-disorder
#13
JOURNAL ARTICLE
Chen Chen, Jian-Lin Xu, Zhan-Cheng Gu, Shan-Shan Zhou, Guo-Li Wei, Jia-Lin Gu, Hai-Long Ma, Yan-Qi Feng, Zi-Wei Song, Zhan-Peng Yan, Shan Deng, Rong Ding, Song-Lin Li, Jie-Ge Huo
BACKGROUND: Danggui Sini decoction (DSD), a traditional Chinese medicine formula, has the function of nourishing blood, warming meridians, and unblocking collaterals. Our clinical and animal studies had shown that DSD can effectively protect against oxaliplatin (OXA)-induced peripheral neuropathy (OIPN), but the detailed mechanisms remain uncertain. Multiple studies have confirmed that gut microbiota plays a crucial role in the development of OIPN. In this study, the potential mechanism of protective effect of DSD against OIPN by regulating gut microbiota was investigated...
April 7, 2024: Chinese Medicine
https://read.qxmd.com/read/38583286/l-thyroxine-attenuates-extracellular-hsp90%C3%AE-induced-vascular-endothelial-calcification-in-diabetes-mellitus-as-revealed-by-parallel-metabolic-profiles
#14
JOURNAL ARTICLE
Xinyi Ding, Yan Qiu, Guozhen Wu, Shuxian Li, Mengyi Cai, Yongqi Liang, Dongling Li, Xiangrong Luo, Jianfu Meng, Run Yang, Ying Cao, Fang Gao, Yaoming Xue, Fei Zou, Mengchen Zou
BACKGROUND AND AIMS: Diabetic atherosclerotic vascular disease is characterized by extensive vascular calcification. However, an elevated blood glucose level alone does not explain this pathogenesis. We investigated the metabolic markers underlying diabetic atherosclerosis and whether extracellular Hsp90α (eHsp90α) triggers vascular endothelial calcification in this particular metabolic environment. METHODS: A parallel human/animal model metabolomics approach was used...
March 26, 2024: Atherosclerosis
https://read.qxmd.com/read/38579670/clustered-de-novo-start-loss-variants-in-glul-result-in-a-developmental-and-epileptic-encephalopathy-via-stabilization-of-glutamine-synthetase
#15
JOURNAL ARTICLE
Amy G Jones, Matilde Aquilino, Rory J Tinker, Laura Duncan, Zandra Jenkins, Gemma L Carvill, Stephanie J DeWard, Dorothy K Grange, M J Hajianpour, Benjamin J Halliday, Muriel Holder-Espinasse, Judit Horvath, Silvia Maitz, Vincenzo Nigro, Manuela Morleo, Victoria Paul, Careni Spencer, Alina I Esterhuizen, Tilman Polster, Alice Spano, Inés Gómez-Lozano, Abhishek Kumar, Gemma Poke, John A Phillips, Hunter R Underhill, Gregory Gimenez, Takashi Namba, Stephen P Robertson
Glutamine synthetase (GS), encoded by GLUL, catalyzes the conversion of glutamate to glutamine. GS is pivotal for the generation of the neurotransmitters glutamate and gamma-aminobutyric acid and is the primary mechanism of ammonia detoxification in the brain. GS levels are regulated post-translationally by an N-terminal degron that enables the ubiquitin-mediated degradation of GS in a glutamine-induced manner. GS deficiency in humans is known to lead to neurological defects and death in infancy, yet how dysregulation of the degron-mediated control of GS levels might affect neurodevelopment is unknown...
April 4, 2024: American Journal of Human Genetics
https://read.qxmd.com/read/38577032/structural-bioinformatics-studies-of-six-human-abc-transporters-and-their-alphafold2-predicted-water-soluble-qty-variants
#16
JOURNAL ARTICLE
Emily Pan, Fei Tao, Eva Smorodina, Shuguang Zhang
Human ATP-binding cassette (ABC) transporters are one of the largest families of membrane proteins and perform diverse functions. Many of them are associated with multidrug resistance that often results in cancer treatment with poor outcomes. Here, we present the structural bioinformatics study of six human ABC membrane transporters with experimentally determined cryo-electron microscopy (CryoEM) structures including ABCB7, ABCC8, ABCD1, ABCD4, ABCG1, ABCG5, and their AlphaFold2-predicted water-soluble QTY variants...
2024: QRB discovery
https://read.qxmd.com/read/38570326/preparation-of-amino-acid-chiral-ionic-liquid-and-visual-chiral-recognition-of-glutamine-and-phenylalanine-enantiomers
#17
JOURNAL ARTICLE
Luzheng Dong, Jun Wu, Xiashi Zhu
In this paper, the amino acid chiral ionic liquid (AACIL) was prepared with L-phenylalanine and imidazole. It was characterized by CD, FT-IR, 1 H NMR, and 13 C NMR spectrum. The chiral recognition sensor was constructed with AACIL and Cu(II), which exhibited different chiral visual responses (solubility or color difference) to the enantiomers of glutamine (Gln) and phenylalanine (Phe). The effects of solvent, pH, time, temperature, metal ions, and other amino acids on visual chiral recognition were optimized...
April 2024: Chirality
https://read.qxmd.com/read/38563324/theabrownin-from-fu-brick-tea-ameliorates-high-fat-induced-insulin-resistance-hepatic-steatosis-and-inflammation-in-mice-by-altering-the-composition-and-metabolites-of-gut-microbiota
#18
JOURNAL ARTICLE
Zhongting Lu, Yan Zheng, Juan Zheng, Qijian Liang, Qingcai Zhen, Mengjie Cui, Haoru Yang, Haotian Wu, Cuixia Tian, Kangming Zhu, Chunyong Bian, Lei Du, Hao Wu, Xin Guo
Fu Brick tea belongs to fermented dark tea, which is one of the six categories of tea. Fu Brick tea has been reported to reduce adiposity and has beneficial effects in the treatment of hypercholesterolemia and cardiovascular disease. Theabrownin (TB) is one of the pigments with the most abundant content in Fu Brick tea. TB has also been reported to have lipid-lowering effects, but its mechanism remains unclear. We found that TB could effectively reduce the insulin resistance and fat deposition induced by a high fat diet (HFD), decrease inflammation in the liver, improve intestinal integrity, and reduce endotoxins in circulation...
April 2, 2024: Food & Function
https://read.qxmd.com/read/38559444/purified-protein-glutaminase-from-chryseobacterium-proteolyticum-enhances-the-properties-of-wheat-gluten
#19
JOURNAL ARTICLE
Zheng Zhang, Rui Shi, Xiaoyu Zhu, Lihui Zheng, Mingfei Jin, Deming Jiang, Yelin Wu, Hongliang Gao, Zhongyi Chang, Dongrui Wang, Jiajing Wu, Jing Huang
Protein glutaminase (PG), originating from Chryseobacterium proteolyticum, can catalyze the deamidation of glutamine residues in plant proteins into glutamic acid, thus enhancing its functional properties. However, the low yield of PG limits its industrial production. In this study, the yield of PG in C. proteolyticum TM1040 increased by 121 %, up to 7.30 U/mL in a 15 L fermenter after medium optimization. Subsequently, purified PG was obtained by cation exchange chromatography (CEX) coupled with hydrophobic interaction chromatography (HIC)...
June 30, 2024: Food chemistry: X
https://read.qxmd.com/read/38555305/myeloid-derived-suppressor-cell-mitochondrial-fitness-governs-chemotherapeutic-efficacy-in-hematologic-malignancies
#20
JOURNAL ARTICLE
Saeed Daneshmandi, Jee Eun Choi, Qi Yan, Cameron R MacDonald, Manu Pandey, Mounika Goruganthu, Nathan Roberts, Prashant K Singh, Richard M Higashi, Andrew N Lane, Teresa W-M Fan, Jianmin Wang, Philip L McCarthy, Elizabeth A Repasky, Hemn Mohammadpour
Myeloid derived suppressor cells (MDSCs) are key regulators of immune responses and correlate with poor outcomes in hematologic malignancies. Here, we identify that MDSC mitochondrial fitness controls the efficacy of doxorubicin chemotherapy in a preclinical lymphoma model. Mechanistically, we show that triggering STAT3 signaling via β2-adrenergic receptor (β2-AR) activation leads to improved MDSC function through metabolic reprograming, marked by sustained mitochondrial respiration and higher ATP generation which reduces AMPK signaling, altering energy metabolism...
March 30, 2024: Nature Communications
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