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marian joseph

Anoop Thomas, Jino George, Atef Shalabney, Marian Dryzhakov, Sreejith J Varma, Joseph Moran, Thibault Chervy, Xiaolan Zhong, Eloïse Devaux, Cyriaque Genet, James A Hutchison, Thomas W Ebbesen
The ground-state deprotection of a simple alkynylsilane is studied under vibrational strong coupling to the zero-point fluctuations, or vacuum electromagnetic field, of a resonant IR microfluidic cavity. The reaction rate decreased by a factor of up to 5.5 when the Si-C vibrational stretching modes of the reactant were strongly coupled. The relative change in the reaction rate under strong coupling depends on the Rabi splitting energy. Product analysis by GC-MS confirmed the kinetic results. Temperature dependence shows that the activation enthalpy and entropy change significantly, suggesting that the transition state is modified from an associative to a dissociative type...
September 12, 2016: Angewandte Chemie
Wesley C Van Voorhis, John H Adams, Roberto Adelfio, Vida Ahyong, Myles H Akabas, Pietro Alano, Aintzane Alday, Yesmalie Alemán Resto, Aishah Alsibaee, Ainhoa Alzualde, Katherine T Andrews, Simon V Avery, Vicky M Avery, Lawrence Ayong, Mark Baker, Stephen Baker, Choukri Ben Mamoun, Sangeeta Bhatia, Quentin Bickle, Lotfi Bounaadja, Tana Bowling, Jürgen Bosch, Lauren E Boucher, Fabrice F Boyom, Jose Brea, Marian Brennan, Audrey Burton, Conor R Caffrey, Grazia Camarda, Manuela Carrasquilla, Dee Carter, Maria Belen Cassera, Ken Chih-Chien Cheng, Worathad Chindaudomsate, Anthony Chubb, Beatrice L Colon, Daisy D Colón-López, Yolanda Corbett, Gregory J Crowther, Noemi Cowan, Sarah D'Alessandro, Na Le Dang, Michael Delves, Joseph L DeRisi, Alan Y Du, Sandra Duffy, Shimaa Abd El-Salam El-Sayed, Michael T Ferdig, José A Fernández Robledo, David A Fidock, Isabelle Florent, Patrick V T Fokou, Ani Galstian, Francisco Javier Gamo, Suzanne Gokool, Ben Gold, Todd Golub, Gregory M Goldgof, Rajarshi Guha, W Armand Guiguemde, Nil Gural, R Kiplin Guy, Michael A E Hansen, Kirsten K Hanson, Andrew Hemphill, Rob Hooft van Huijsduijnen, Takaaki Horii, Paul Horrocks, Tyler B Hughes, Christopher Huston, Ikuo Igarashi, Katrin Ingram-Sieber, Maurice A Itoe, Ajit Jadhav, Amornrat Naranuntarat Jensen, Laran T Jensen, Rays H Y Jiang, Annette Kaiser, Jennifer Keiser, Thomas Ketas, Sebastien Kicka, Sunyoung Kim, Kiaran Kirk, Vidya P Kumar, Dennis E Kyle, Maria Jose Lafuente, Scott Landfear, Nathan Lee, Sukjun Lee, Adele M Lehane, Fengwu Li, David Little, Liqiong Liu, Manuel Llinás, Maria I Loza, Aristea Lubar, Leonardo Lucantoni, Isabelle Lucet, Louis Maes, Dalu Mancama, Nuha R Mansour, Sandra March, Sheena McGowan, Iset Medina Vera, Stephan Meister, Luke Mercer, Jordi Mestres, Alvine N Mfopa, Raj N Misra, Seunghyun Moon, John P Moore, Francielly Morais Rodrigues da Costa, Joachim Müller, Arantza Muriana, Stephen Nakazawa Hewitt, Bakela Nare, Carl Nathan, Nathalie Narraidoo, Sujeevi Nawaratna, Kayode K Ojo, Diana Ortiz, Gordana Panic, George Papadatos, Silvia Parapini, Kailash Patra, Ngoc Pham, Sarah Prats, David M Plouffe, Sally-Ann Poulsen, Anupam Pradhan, Celia Quevedo, Ronald J Quinn, Christopher A Rice, Mohamed Abdo Rizk, Andrea Ruecker, Robert St Onge, Rafaela Salgado Ferreira, Jasmeet Samra, Natalie G Robinett, Ulrich Schlecht, Marjorie Schmitt, Filipe Silva Villela, Francesco Silvestrini, Robert Sinden, Dennis A Smith, Thierry Soldati, Andreas Spitzmüller, Serge Maximilian Stamm, David J Sullivan, William Sullivan, Sundari Suresh, Brian M Suzuki, Yo Suzuki, S Joshua Swamidass, Donatella Taramelli, Lauve R Y Tchokouaha, Anjo Theron, David Thomas, Kathryn F Tonissen, Simon Townson, Abhai K Tripathi, Valentin Trofimov, Kenneth O Udenze, Imran Ullah, Cindy Vallieres, Edgar Vigil, Joseph M Vinetz, Phat Voong Vinh, Hoan Vu, Nao-Aki Watanabe, Kate Weatherby, Pamela M White, Andrew F Wilks, Elizabeth A Winzeler, Edward Wojcik, Melanie Wree, Wesley Wu, Naoaki Yokoyama, Paul H A Zollo, Nada Abla, Benjamin Blasco, Jeremy Burrows, Benoît Laleu, Didier Leroy, Thomas Spangenberg, Timothy Wells, Paul A Willis
A major cause of the paucity of new starting points for drug discovery is the lack of interaction between academia and industry. Much of the global resource in biology is present in universities, whereas the focus of medicinal chemistry is still largely within industry. Open source drug discovery, with sharing of information, is clearly a first step towards overcoming this gap. But the interface could especially be bridged through a scale-up of open sharing of physical compounds, which would accelerate the finding of new starting points for drug discovery...
July 2016: PLoS Pathogens
Atsushi Miyanohara, Kota Kamizato, Stefan Juhas, Jana Juhasova, Michael Navarro, Silvia Marsala, Nada Lukacova, Marian Hruska-Plochan, Erik Curtis, Brandon Gabel, Joseph Ciacci, Eric T Ahrens, Brian K Kaspar, Don Cleveland, Martin Marsala
Effective in vivo use of adeno-associated virus (AAV)-based vectors to achieve gene-specific silencing or upregulation in the central nervous system has been limited by the inability to provide more than limited deep parenchymal expression in adult animals using delivery routes with the most clinical relevance (intravenous or intrathecal). Here, we demonstrate that the spinal pia membrane represents the primary barrier limiting effective AAV9 penetration into the spinal parenchyma after intrathecal AAV9 delivery...
2016: Molecular Therapy. Methods & Clinical Development
Lyubov Bryushkova, Clement Zai, Sheng Chen, Irene Pappa, Viara Mileva, Henning Tiemeier, Marian Bakermans-Kranenburg, James L Kennedy, Joseph H Beitchman
Genetic variation in stress response protein FKBP5 is associated with adult psychopathology, but little is known about its role in children's mental health. 5 polymorphisms were genotyped in 170 high aggression cases and 170 age- and sex-matched controls. The rs9470080 polymorphism was associated with physiological anxiety, while rs4713916 polymorphism interacted with maltreatment to influence externalizing traits. These results suggest that genetic variation in FKBP5 has a role in children's vulnerability to stress-related behaviours...
August 30, 2016: Psychiatry Research
Maha S Zaki, Laila Selim, Hala T El-Bassyouni, Mahmoud Y Issa, Iman Mahmoud, Samira Ismail, Mariane Girgis, Abdelrahim A Sadek, Joseph G Gleeson, Mohamed S Abdel Hamid
AIM: Molybdenum cofactor deficiency (MoCD) and Sulfite oxidase deficiency (SOD) are rare autosomal recessive conditions of sulfur-containing amino acid metabolism with overlapping clinical features and emerging therapies. The clinical phenotype is indistinguishable and they can only be differentiated biochemically. MOCS1, MOCS2, MOCS3, and GPRN genes contribute to the synthesis of molybdenum cofactor, and SUOX gene encodes sulfite oxidase. The aim of this study was to elucidate the clinical, radiological, biochemical and molecular findings in patients with SOD and MoCD...
September 2016: European Journal of Paediatric Neurology: EJPN
Michael J Genin, Isabel C Gonzalez Valcarcel, William G Holloway, Jason Lamar, Marian Mosior, Eric Hawkins, Thomas Estridge, Jeffrey Weidner, Thomas Seng, David Yurek, Lisa A Adams, Jennifer Weller, Vincent L Reynolds, Joseph T Brozinick
To develop novel treatments for type 2 diabetes and dyslipidemia, we pursued inhibitors of serine palmitoyl transferase (SPT). To this end compounds 1 and 2 were developed as potent SPT inhibitors in vitro. 1 and 2 reduce plasma ceramides in rodents, have a slight trend toward enhanced insulin sensitization in DIO mice, and reduce triglycerides and raise HDL in cholesterol/cholic acid fed rats. Unfortunately these molecules cause a gastric enteropathy after chronic dosing in rats.
June 23, 2016: Journal of Medicinal Chemistry
Ruth C Travis, Paul N Appleby, Richard M Martin, Jeff M P Holly, Demetrius Albanes, Amanda Black, H Bas Bueno-de-Mesquita, June M Chan, Chu Chen, Maria-Dolores Chirlaque, Michael B Cook, Mélanie Deschasaux, Jenny L Donovan, Luigi Ferrucci, Pilar Galan, Graham G Giles, Edward L Giovannucci, Marc J Gunter, Laurel A Habel, Freddie C Hamdy, Kathy J Helzlsouer, Serge Hercberg, Robert N Hoover, Joseph A M J L Janssen, Rudolf Kaaks, Tatsuhiko Kubo, Loic Le Marchand, E Jeffrey Metter, Kazuya Mikami, Joan K Morris, David E Neal, Marian L Neuhouser, Kotaro Ozasa, Domenico Palli, Elizabeth A Platz, Michael N Pollak, Alison J Price, Monique J Roobol, Catherine Schaefer, Jeannette M Schenk, Gianluca Severi, Meir J Stampfer, Pär Stattin, Akiko Tamakoshi, Catherine M Tangen, Mathilde Touvier, Nicholas J Wald, Noel S Weiss, Regina G Ziegler, Timothy J Key, Naomi E Allen
The role of insulin-like growth factors (IGF) in prostate cancer development is not fully understood. To investigate the association between circulating concentrations of IGFs (IGF-I, IGF-II, IGFBP-1, IGFBP-2, and IGFBP-3) and prostate cancer risk, we pooled individual participant data from 17 prospective and two cross-sectional studies, including up to 10,554 prostate cancer cases and 13,618 control participants. Conditional logistic regression was used to estimate the ORs for prostate cancer based on the study-specific fifth of each analyte...
April 15, 2016: Cancer Research
Joseph V Thompson, Joanne M Clark, Sophie E Legge, Giouliana Kadra, Johnny Downs, James Tr Walters, Marian L Hamshere, Richard D Hayes, David Taylor, James H MacCabe
RATIONALE: Antipsychotic polypharmacy (APP) is commonly used in schizophrenia despite a lack of robust evidence for efficacy, as well as evidence of increased rates of adverse drug reactions and mortality. OBJECTIVES: We sought to examine APP and the use of other adjunctive medications in patients with treatment-resistant schizophrenic disorders (ICD-10 diagnoses F20-F29) immediately prior to clozapine initiation, and to investigate clinical and sociodemographic factors associated with APP use in this setting...
May 2016: Journal of Psychopharmacology
André Utgenannt, Ross Maspero, Andrea Fortini, Rebecca Turner, Marian Florescu, Christopher Jeynes, Antonios G Kanaras, Otto L Muskens, Richard P Sear, Joseph L Keddie
When fabricating photonic crystals from suspensions in volatile liquids using the horizontal deposition method, the conventional approach is to evaporate slowly to increase the time for particles to settle in an ordered, periodic close-packed structure. Here, we show that the greatest ordering of 10 nm aqueous gold nanoparticles (AuNPs) in a template of larger spherical polymer particles (mean diameter of 338 nm) is achieved with very fast water evaporation rates obtained with near-infrared radiative heating...
February 23, 2016: ACS Nano
Paolo Anderlini, Juan Wu, Iris Gersten, Marian Ewell, Jakob Tolar, Joseph H Antin, Roberta Adams, Sally Arai, Gretchen Eames, Mitchell E Horwitz, John McCarty, Ryotaro Nakamura, Michael A Pulsipher, Scott Rowley, Eric Leifer, Shelly L Carter, Nancy L DiFronzo, Mary M Horowitz, Dennis Confer, H Joachim Deeg, Mary Eapen
BACKGROUND: The optimum preparative regimen for unrelated donor marrow transplantation in patients with severe aplastic anaemia remains to be established. We investigated whether the combination of fludarabine, anti-thymocyte globulin, and total body irradiation (TBI) would enable reduction of the cyclophosphamide dose to less than 200 mg/kg while maintaining engraftment and having a survival similar to or better than that with standard regimens using a cyclophosphamide dose of 200 mg/kg (known to be associated with significant organ toxicity) for unrelated donor transplantation for severe aplastic anaemia...
September 2015: Lancet Haematology
Joseph Dute
No abstract text is available yet for this article.
March 2015: European Journal of Health Law
Linh M Vuong, Karthikeyani Chellappa, Joseph M Dhahbi, Jonathan R Deans, Bin Fang, Eugene Bolotin, Nina V Titova, Nate P Hoverter, Stephen R Spindler, Marian L Waterman, Frances M Sladek
The nuclear receptor hepatocyte nuclear factor 4α (HNF4α) is tumor suppressive in the liver but amplified in colon cancer, suggesting that it also might be oncogenic. To investigate whether this discrepancy is due to different HNF4α isoforms derived from its two promoters (P1 and P2), we generated Tet-On-inducible human colon cancer (HCT116) cell lines that express either the P1-driven (HNF4α2) or P2-driven (HNF4α8) isoform and analyzed them for tumor growth and global changes in gene expression (transcriptome sequencing [RNA-seq] and chromatin immunoprecipitation sequencing [ChIP-seq])...
October 2015: Molecular and Cellular Biology
Miriam M Cortese-Krott, Gunter G C Kuhnle, Alex Dyson, Bernadette O Fernandez, Marian Grman, Jenna F DuMond, Mark P Barrow, George McLeod, Hidehiko Nakagawa, Karol Ondrias, Péter Nagy, S Bruce King, Joseph E Saavedra, Larry K Keefer, Mervyn Singer, Malte Kelm, Anthony R Butler, Martin Feelisch
Experimental evidence suggests that nitric oxide (NO) and hydrogen sulfide (H2S) signaling pathways are intimately intertwined, with mutual attenuation or potentiation of biological responses in the cardiovascular system and elsewhere. The chemical basis of this interaction is elusive. Moreover, polysulfides recently emerged as potential mediators of H2S/sulfide signaling, but their biosynthesis and relationship to NO remain enigmatic. We sought to characterize the nature, chemical biology, and bioactivity of key reaction products formed in the NO/sulfide system...
August 25, 2015: Proceedings of the National Academy of Sciences of the United States of America
Marian Dryzhakov, Malik Hellal, Eléna Wolf, Florian C Falk, Joseph Moran
A cocatalytic effect of nitro compounds is described for the B(C6F5)3·H2O catalyzed azidation of tertiary aliphatic alcohols, enabling catalyst turnover for the first time and with a broad range of substrates. Kinetic investigations into this surprising effect reveal that nitro compounds induce a switch from first order concentration dependence in Brønsted acid to second order concentration dependence in Brønsted acid and second order dependence in the nitro compounds. Kinetic, electronic, and spectroscopic evidence suggests that higher order hydrogen-bonded aggregates of nitro compounds and acids are the kinetically competent Brønsted acid catalysts...
August 5, 2015: Journal of the American Chemical Society
Scott P Robertson, Harry Quon, Ana P Kiess, Joseph A Moore, Wuyang Yang, Zhi Cheng, Sarah Afonso, Mysha Allen, Marian Richardson, Amanda Choflet, Andrew Sharabi, Todd R McNutt
PURPOSE: To develop a hypothesis-generating framework for automatic extraction of dose-outcome relationships from an in-house, analytic oncology database. METHODS: Dose-volume histograms (DVH) and clinical outcomes have been routinely stored to the authors' database for 684 head and neck cancer patients treated from 2007 to 2014. Database queries were developed to extract outcomes that had been assessed for at least 100 patients, as well as DVH curves for organs-at-risk (OAR) that were contoured for at least 100 patients...
July 2015: Medical Physics
Leandro F Vendruscolo, David Estey, Vivian Goodell, Lauren G Macshane, Marian L Logrip, Joel E Schlosburg, M Adrienne McGinn, Eva R Zamora-Martinez, Joseph K Belanoff, Hazel J Hunt, Pietro P Sanna, Olivier George, George F Koob, Scott Edwards, Barbara J Mason
Alcoholism, or alcohol use disorder, is a major public health concern that is a considerable risk factor for morbidity and disability; therefore, effective treatments are urgently needed. Here, we demonstrated that the glucocorticoid receptor (GR) antagonist mifepristone reduces alcohol intake in alcohol-dependent rats but not in nondependent animals. Both systemic delivery and direct administration into the central nucleus of the amygdala, a critical stress-related brain region, were sufficient to reduce alcohol consumption in dependent animals...
August 3, 2015: Journal of Clinical Investigation
Joseph N York, Christopher Albanese, Olga Rodriguez, Yi-Chien Le, Marian Ackun-Farmmer, Edward Van Keuren
Superparamagnetic iron oxide nanoparticles have recently been developed as T2 contrast agents for magnetic resonance imaging. Here we report the dependence of the phase relaxivity, r2, on the particle shape. We show that the size dependence of the relaxivity for spherical particles can be generalized to spheroidal particles. In addition, we show that the saturation of relaxivity above a certain size observed in spherical particles does not occur in the spheroidal particles investigated.
November 2014: Journal of Biomedical Nanotechnology
David Serur, Marian Charlton, Gretchen Bretzlaff, Joseph Sinacore, Paul Christos, Janna Gordon-Elliott
Studies have shown that kidney donation to a spouse has a positive impact on marriage. This study was done to evaluate the impact on marriage when donation occurs to someone other than the spouse. Two groups of donors from our centre who donated around the same period were studied: donation to a spouse (spouse donor (SD)) or to someone other than the spouse (non-spouse donor (ND)). A survey, the Revised Dyadic Adjustment Scale, was used to evaluate the effect of donation on the marriage. This tool consists of 14 questions that measure how satisfying and stable the relationship is...
June 2015: Nephrology
Paul Richards, Joseph Amara, Mariane C Ferme, Prince Kamara, Esther Mokuwa, Amara Idara Sheriff, Roland Suluku, Maarten Voors
The current outbreak of Ebola Virus Disease in Upper West Africa is the largest ever recorded. Molecular evidence suggests spread has been almost exclusively through human-to-human contact. Social factors are thus clearly important to understand the epidemic and ways in which it might be stopped, but these factors have so far been little analyzed. The present paper focuses on Sierra Leone, and provides cross sectional data on the least understood part of the epidemic-the largely undocumented spread of Ebola in rural areas...
April 2015: PLoS Neglected Tropical Diseases
Wilson Leung, Christopher D Shaffer, Laura K Reed, Sheryl T Smith, William Barshop, William Dirkes, Matthew Dothager, Paul Lee, Jeannette Wong, David Xiong, Han Yuan, James E J Bedard, Joshua F Machone, Seantay D Patterson, Amber L Price, Bryce A Turner, Srebrenka Robic, Erin K Luippold, Shannon R McCartha, Tezin A Walji, Chelsea A Walker, Kenneth Saville, Marita K Abrams, Andrew R Armstrong, William Armstrong, Robert J Bailey, Chelsea R Barberi, Lauren R Beck, Amanda L Blaker, Christopher E Blunden, Jordan P Brand, Ethan J Brock, Dana W Brooks, Marie Brown, Sarah C Butzler, Eric M Clark, Nicole B Clark, Ashley A Collins, Rebecca J Cotteleer, Peterson R Cullimore, Seth G Dawson, Carter T Docking, Sasha L Dorsett, Grace A Dougherty, Kaitlyn A Downey, Andrew P Drake, Erica K Earl, Trevor G Floyd, Joshua D Forsyth, Jonathan D Foust, Spencer L Franchi, James F Geary, Cynthia K Hanson, Taylor S Harding, Cameron B Harris, Jonathan M Heckman, Heather L Holderness, Nicole A Howey, Dontae A Jacobs, Elizabeth S Jewell, Maria Kaisler, Elizabeth A Karaska, James L Kehoe, Hannah C Koaches, Jessica Koehler, Dana Koenig, Alexander J Kujawski, Jordan E Kus, Jennifer A Lammers, Rachel R Leads, Emily C Leatherman, Rachel N Lippert, Gregory S Messenger, Adam T Morrow, Victoria Newcomb, Haley J Plasman, Stephanie J Potocny, Michelle K Powers, Rachel M Reem, Jonathan P Rennhack, Katherine R Reynolds, Lyndsey A Reynolds, Dong K Rhee, Allyson B Rivard, Adam J Ronk, Meghan B Rooney, Lainey S Rubin, Luke R Salbert, Rasleen K Saluja, Taylor Schauder, Allison R Schneiter, Robert W Schulz, Karl E Smith, Sarah Spencer, Bryant R Swanson, Melissa A Tache, Ashley A Tewilliager, Amanda K Tilot, Eve VanEck, Matthew M Villerot, Megan B Vylonis, David T Watson, Juliana A Wurzler, Lauren M Wysocki, Monica Yalamanchili, Matthew A Zaborowicz, Julia A Emerson, Carlos Ortiz, Frederic J Deuschle, Lauren A DiLorenzo, Katie L Goeller, Christopher R Macchi, Sarah E Muller, Brittany D Pasierb, Joseph E Sable, Jessica M Tucci, Marykathryn Tynon, David A Dunbar, Levent H Beken, Alaina C Conturso, Benjamin L Danner, Gabriella A DeMichele, Justin A Gonzales, Maureen S Hammond, Colleen V Kelley, Elisabeth A Kelly, Danielle Kulich, Catherine M Mageeney, Nikie L McCabe, Alyssa M Newman, Lindsay A Spaeder, Richard A Tumminello, Dennis Revie, Jonathon M Benson, Michael C Cristostomo, Paolo A DaSilva, Katherine S Harker, Jenifer N Jarrell, Luis A Jimenez, Brandon M Katz, William R Kennedy, Kimberly S Kolibas, Mark T LeBlanc, Trung T Nguyen, Daniel S Nicolas, Melissa D Patao, Shane M Patao, Bryan J Rupley, Bridget J Sessions, Jennifer A Weaver, Anya L Goodman, Erica L Alvendia, Shana M Baldassari, Ashley S Brown, Ian O Chase, Maida Chen, Scott Chiang, Avery B Cromwell, Ashley F Custer, Tia M DiTommaso, Jad El-Adaimi, Nora C Goscinski, Ryan A Grove, Nestor Gutierrez, Raechel S Harnoto, Heather Hedeen, Emily L Hong, Barbara L Hopkins, Vilma F Huerta, Colin Khoshabian, Kristin M LaForge, Cassidy T Lee, Benjamin M Lewis, Anniken M Lydon, Brian J Maniaci, Ryan D Mitchell, Elaine V Morlock, William M Morris, Priyanka Naik, Nicole C Olson, Jeannette M Osterloh, Marcos A Perez, Jonathan D Presley, Matt J Randazzo, Melanie K Regan, Franca G Rossi, Melanie A Smith, Eugenia A Soliterman, Ciani J Sparks, Danny L Tran, Tiffany Wan, Anne A Welker, Jeremy N Wong, Aparna Sreenivasan, Jim Youngblom, Andrew Adams, Justin Alldredge, Ashley Bryant, David Carranza, Alyssa Cifelli, Kevin Coulson, Calise Debow, Noelle Delacruz, Charlene Emerson, Cassandra Farrar, Don Foret, Edgar Garibay, John Gooch, Michelle Heslop, Sukhjit Kaur, Ambreen Khan, Van Kim, Travis Lamb, Peter Lindbeck, Gabi Lucas, Elizabeth Macias, Daniela Martiniuc, Lissett Mayorga, Joseph Medina, Nelson Membreno, Shady Messiah, Lacey Neufeld, San Francisco Nguyen, Zachary Nichols, George Odisho, Daymon Peterson, Laura Rodela, Priscilla Rodriguez, Vanessa Rodriguez, Jorge Ruiz, Will Sherrill, Valeria Silva, Jeri Sparks, Geeta Statton, Ashley Townsend, Isabel Valdez, Mary Waters, Kyle Westphal, Stacey Winkler, Joannee Zumkehr, Randall J DeJong, Arlene J Hoogewerf, Cheri M Ackerman, Isaac O Armistead, Lara Baatenburg, Matthew J Borr, Lindsay K Brouwer, Brandon J Burkhart, Kelsey T Bushhouse, Lejla Cesko, Tiffany Y Y Choi, Heather Cohen, Amanda M Damsteegt, Jess M Darusz, Cory M Dauphin, Yelena P Davis, Emily J Diekema, Melissa Drewry, Michelle E M Eisen, Hayley M Faber, Katherine J Faber, Elizabeth Feenstra, Isabella T Felzer-Kim, Brandy L Hammond, Jesse Hendriksma, Milton R Herrold, Julia A Hilbrands, Emily J Howell, Sarah A Jelgerhuis, Timothy R Jelsema, Benjamin K Johnson, Kelly K Jones, Anna Kim, Ross D Kooienga, Erika E Menyes, Eric A Nollet, Brittany E Plescher, Lindsay Rios, Jenny L Rose, Allison J Schepers, Geoff Scott, Joshua R Smith, Allison M Sterling, Jenna C Tenney, Chris Uitvlugt, Rachel E VanDyken, Marielle VanderVennen, Samantha Vue, Nighat P Kokan, Kwabea Agbley, Sampson K Boham, Daniel Broomfield, Kayla Chapman, Ali Dobbe, Ian Dobbe, William Harrington, Marwan Ibrahem, Andre Kennedy, Chad A Koplinsky, Cassandra Kubricky, Danielle Ladzekpo, Claire Pattison, Roman E Ramirez, Lucia Wande, Sarah Woehlke, Matthew Wawersik, Elizabeth Kiernan, Jeffrey S Thompson, Roxanne Banker, Justina R Bartling, Chinmoy I Bhatiya, Anna L Boudoures, Lena Christiansen, Daniel S Fosselman, Kristin M French, Ishwar S Gill, Jessen T Havill, Jaelyn L Johnson, Lauren J Keny, John M Kerber, Bethany M Klett, Christina N Kufel, Francis J May, Jonathan P Mecoli, Callie R Merry, Lauren R Meyer, Emily G Miller, Gregory J Mullen, Katherine C Palozola, Jacob J Pfeil, Jessica G Thomas, Evan M Verbofsky, Eric P Spana, Anant Agarwalla, Julia Chapman, Ben Chlebina, Insun Chong, I N Falk, John D Fitzgibbons, Harrison Friedman, Osagie Ighile, Andrew J Kim, Kristin A Knouse, Faith Kung, Danny Mammo, Chun Leung Ng, Vinayak S Nikam, Diana Norton, Philip Pham, Jessica W Polk, Shreya Prasad, Helen Rankin, Camille D Ratliff, Victoria Scala, Nicholas U Schwartz, Jessica A Shuen, Amy Xu, Thomas Q Xu, Yi Zhang, Anne G Rosenwald, Martin G Burg, Stephanie J Adams, Morgan Baker, Bobbi Botsford, Briana Brinkley, Carter Brown, Shadie Emiah, Erica Enoch, Chad Gier, Alyson Greenwell, Lindsay Hoogenboom, Jordan E Matthews, Mitchell McDonald, Amanda Mercer, Nicholaus Monsma, Kristine Ostby, Alen Ramic, Devon Shallman, Matthew Simon, Eric Spencer, Trisha Tomkins, Pete Wendland, Anna Wylie, Michael J Wolyniak, Gregory M Robertson, Samuel I Smith, Justin R DiAngelo, Eric D Sassu, Satish C Bhalla, Karim A Sharif, Tenzin Choeying, Jason S Macias, Fareed Sanusi, Karvyn Torchon, April E Bednarski, Consuelo J Alvarez, Kristen C Davis, Carrie A Dunham, Alaina J Grantham, Amber N Hare, Jennifer Schottler, Zackary W Scott, Gary A Kuleck, Nicole S Yu, Marian M Kaehler, Jacob Jipp, Paul J Overvoorde, Elizabeth Shoop, Olivia Cyrankowski, Betsy Hoover, Matt Kusner, Devry Lin, Tijana Martinov, Jonathan Misch, Garrett Salzman, Holly Schiedermayer, Michael Snavely, Stephanie Zarrasola, Susan Parrish, Atlee Baker, Alissa Beckett, Carissa Belella, Julie Bryant, Turner Conrad, Adam Fearnow, Carolina Gomez, Robert A Herbstsomer, Sarah Hirsch, Christen Johnson, Melissa Jones, Rita Kabaso, Eric Lemmon, Carolina Marques Dos Santos Vieira, Darryl McFarland, Christopher McLaughlin, Abbie Morgan, Sepo Musokotwane, William Neutzling, Jana Nietmann, Christina Paluskievicz, Jessica Penn, Emily Peoples, Caitlin Pozmanter, Emily Reed, Nichole Rigby, Lasse Schmidt, Micah Shelton, Rebecca Shuford, Tiara Tirasawasdichai, Blair Undem, Damian Urick, Kayla Vondy, Bryan Yarrington, Todd T Eckdahl, Jeffrey L Poet, Alica B Allen, John E Anderson, Jason M Barnett, Jordan S Baumgardner, Adam D Brown, Jordan E Carney, Ramiro A Chavez, Shelbi L Christgen, Jordan S Christie, Andrea N Clary, Michel A Conn, Kristen M Cooper, Matt J Crowley, Samuel T Crowley, Jennifer S Doty, Brian A Dow, Curtis R Edwards, Darcie D Elder, John P Fanning, Bridget M Janssen, Anthony K Lambright, Curtiss E Lane, Austin B Limle, Tammy Mazur, Marly R McCracken, Alexa M McDonough, Amy D Melton, Phillip J Minnick, Adam E Musick, William H Newhart, Joseph W Noynaert, Bradley J Ogden, Michael W Sandusky, Samantha M Schmuecker, Anna L Shipman, Anna L Smith, Kristen M Thomsen, Matthew R Unzicker, William B Vernon, Wesley W Winn, Dustin S Woyski, Xiao Zhu, Chunguang Du, Caitlin Ament, Soham Aso, Laura Simone Bisogno, Jason Caronna, Nadezhda Fefelova, Lenin Lopez, Lorraine Malkowitz, Jonathan Marra, Daniella Menillo, Ifeanyi Obiorah, Eric Nyabeta Onsarigo, Shekerah Primus, Mahdi Soos, Archana Tare, Ameer Zidan, Christopher J Jones, Todd Aronhalt, James M Bellush, Christa Burke, Steve DeFazio, Benjamin R Does, Todd D Johnson, Nicholas Keysock, Nelson H Knudsen, James Messler, Kevin Myirski, Jade Lea Rekai, Ryan Michael Rempe, Michael S Salgado, Erica Stagaard, Justin R Starcher, Andrew W Waggoner, Anastasia K Yemelyanova, Amy T Hark, Anne Bertolet, Cyrus E Kuschner, Kesley Parry, Michael Quach, Lindsey Shantzer, Mary E Shaw, Mary A Smith, Omolara Glenn, Portia Mason, Charlotte Williams, S Catherine Silver Key, Tyneshia C P Henry, Ashlee G Johnson, Jackie X White, Adam Haberman, Sam Asinof, Kelly Drumm, Trip Freeburg, Nadia Safa, Darrin Schultz, Yakov Shevin, Petros Svoronos, Tam Vuong, Jules Wellinghoff, Laura L M Hoopes, Kim M Chau, Alyssa Ward, E Gloria C Regisford, LaJerald Augustine, Brionna Davis-Reyes, Vivienne Echendu, Jasmine Hales, Sharon Ibarra, Lauriaun Johnson, Steven Ovu, John M Braverman, Thomas J Bahr, Nicole M Caesar, Christopher Campana, Daniel W Cassidy, Peter A Cognetti, Johnathan D English, Matthew C Fadus, Cameron N Fick, Philip J Freda, Bryan M Hennessy, Kelsey Hockenberger, Jennifer K Jones, Jessica E King, Christopher R Knob, Karen J Kraftmann, Linghui Li, Lena N Lupey, Carl J Minniti, Thomas F Minton, Joseph V Moran, Krishna Mudumbi, Elizabeth C Nordman, William J Puetz, Lauren M Robinson, Thomas J Rose, Edward P Sweeney, Ashley S Timko, Don W Paetkau, Heather L Eisler, Megan E Aldrup, Jessica M Bodenberg, Mara G Cole, Kelly M Deranek, Megan DeShetler, Rose M Dowd, Alexandra K Eckardt, Sharon C Ehret, Jessica Fese, Amanda D Garrett, Anna Kammrath, Michelle L Kappes, Morgan R Light, Anne C Meier, Allison O'Rouke, Mallory Perella, Kimberley Ramsey, Jennifer R Ramthun, Mary T Reilly, Deirdre Robinett, Nadine L Rossi, Mary Grace Schueler, Emma Shoemaker, Kristin M Starkey, Ashley Vetor, Abby Vrable, Vidya Chandrasekaran, Christopher Beck, Kristen R Hatfield, Douglas A Herrick, Christopher B Khoury, Charlotte Lea, Christopher A Louie, Shannon M Lowell, Thomas J Reynolds, Jeanine Schibler, Alexandra H Scoma, Maxwell T Smith-Gee, Sarah Tuberty, Christopher D Smith, Jane E Lopilato, Jeanette Hauke, Jennifer A Roecklein-Canfield, Maureen Corrielus, Hannah Gilman, Stephanie Intriago, Amanda Maffa, Sabya A Rauf, Katrina Thistle, Melissa Trieu, Jenifer Winters, Bib Yang, Charles R Hauser, Tariq Abusheikh, Yara Ashrawi, Pedro Benitez, Lauren R Boudreaux, Megan Bourland, Miranda Chavez, Samantha Cruz, GiNell Elliott, Jesse R Farek, Sarah Flohr, Amanda H Flores, Chelsey Friedrichs, Zach Fusco, Zane Goodwin, Eric Helmreich, John Kiley, John Mark Knepper, Christine Langner, Megan Martinez, Carlos Mendoza, Monal Naik, Andrea Ochoa, Nicolas Ragland, England Raimey, Sunil Rathore, Evangelina Reza, Griffin Sadovsky, Marie-Isabelle B Seydoux, Jonathan E Smith, Anna K Unruh, Vicente Velasquez, Matthew W Wolski, Yuying Gosser, Shubha Govind, Nicole Clarke-Medley, Leslie Guadron, Dawn Lau, Alvin Lu, Cheryl Mazzeo, Mariam Meghdari, Simon Ng, Brad Pamnani, Olivia Plante, Yuki Kwan Wa Shum, Roy Song, Diana E Johnson, Mai Abdelnabi, Alexi Archambault, Norma Chamma, Shailly Gaur, Deborah Hammett, Adrese Kandahari, Guzal Khayrullina, Sonali Kumar, Samantha Lawrence, Nigel Madden, Max Mandelbaum, Heather Milnthorp, Shiv Mohini, Roshni Patel, Sarah J Peacock, Emily Perling, Amber Quintana, Michael Rahimi, Kristen Ramirez, Rishi Singhal, Corinne Weeks, Tiffany Wong, Aubree T Gillis, Zachary D Moore, Christopher D Savell, Reece Watson, Stephanie F Mel, Arjun A Anilkumar, Paul Bilinski, Rostislav Castillo, Michael Closser, Nathalia M Cruz, Tiffany Dai, Giancarlo F Garbagnati, Lanor S Horton, Dongyeon Kim, Joyce H Lau, James Z Liu, Sandy D Mach, Thu A Phan, Yi Ren, Kenneth E Stapleton, Jean M Strelitz, Ray Sunjed, Joyce Stamm, Morgan C Anderson, Bethany Grace Bonifield, Daniel Coomes, Adam Dillman, Elaine J Durchholz, Antoinette E Fafara-Thompson, Meleah J Gross, Amber M Gygi, Lesley E Jackson, Amy Johnson, Zuzana Kocsisova, Joshua L Manghelli, Kylie McNeil, Michael Murillo, Kierstin L Naylor, Jessica Neely, Emmy E Ogawa, Ashley Rich, Anna Rogers, J Devin Spencer, Kristina M Stemler, Allison A Throm, Matt Van Camp, Katie Weihbrecht, T Aaron Wiles, Mallory A Williams, Matthew Williams, Kyle Zoll, Cheryl Bailey, Leming Zhou, Darla M Balthaser, Azita Bashiri, Mindy E Bower, Kayla A Florian, Nazanin Ghavam, Elizabeth S Greiner-Sosanko, Helmet Karim, Victor W Mullen, Carly E Pelchen, Paul M Yenerall, Jiayu Zhang, Michael R Rubin, Suzette M Arias-Mejias, Armando G Bermudez-Capo, Gabriela V Bernal-Vega, Mariela Colon-Vazquez, Arelys Flores-Vazquez, Mariela Gines-Rosario, Ivan G Llavona-Cartagena, Javier O Martinez-Rodriguez, Lionel Ortiz-Fuentes, Eliezer O Perez-Colomba, Joseph Perez-Otero, Elisandra Rivera, Luke J Rodriguez-Giron, Arnaldo J Santiago-Sanabria, Andrea M Senquiz-Gonzalez, Frank R Soto delValle, Dorianmarie Vargas-Franco, Karla I Velázquez-Soto, Joan D Zambrana-Burgos, Juan Carlos Martinez-Cruzado, Lillyann Asencio-Zayas, Kevin Babilonia-Figueroa, Francis D Beauchamp-Pérez, Juliana Belén-Rodríguez, Luciann Bracero-Quiñones, Andrea P Burgos-Bula, Xavier A Collado-Méndez, Luis R Colón-Cruz, Ana I Correa-Muller, Jonathan L Crooke-Rosado, José M Cruz-García, Marianna Defendini-Ávila, Francheska M Delgado-Peraza, Alex J Feliciano-Cancela, Valerie M Gónzalez-Pérez, Wilfried Guiblet, Aldo Heredia-Negrón, Jennifer Hernández-Muñiz, Lourdes N Irizarry-González, Ángel L Laboy-Corales, Gabriela A Llaurador-Caraballo, Frances Marín-Maldonado, Ulises Marrero-Llerena, Héctor A Martell-Martínez, Idaliz M Martínez-Traverso, Kiara N Medina-Ortega, Sonya G Méndez-Castellanos, Krizia C Menéndez-Serrano, Carol I Morales-Caraballo, Saryleine Ortiz-DeChoudens, Patricia Ortiz-Ortiz, Hendrick Pagán-Torres, Diana Pérez-Afanador, Enid M Quintana-Torres, Edwin G Ramírez-Aponte, Carolina Riascos-Cuero, Michelle S Rivera-Llovet, Ingrid T Rivera-Pagán, Ramón E Rivera-Vicéns, Fabiola Robles-Juarbe, Lorraine Rodríguez-Bonilla, Brian O Rodríguez-Echevarría, Priscila M Rodríguez-García, Abneris E Rodríguez-Laboy, Susana Rodríguez-Santiago, Michael L Rojas-Vargas, Eva N Rubio-Marrero, Albeliz Santiago-Colón, Jorge L Santiago-Ortiz, Carlos E Santos-Ramos, Joseline Serrano-González, Alina M Tamayo-Figueroa, Edna P Tascón-Peñaranda, José L Torres-Castillo, Nelson A Valentín-Feliciano, Yashira M Valentín-Feliciano, Nadyan M Vargas-Barreto, Miguel Vélez-Vázquez, Luis R Vilanova-Vélez, Cristina Zambrana-Echevarría, Christy MacKinnon, Hui-Min Chung, Chris Kay, Anthony Pinto, Olga R Kopp, Joshua Burkhardt, Chris Harward, Robert Allen, Pavan Bhat, Jimmy Hsiang-Chun Chang, York Chen, Christopher Chesley, Dara Cohn, David DuPuis, Michael Fasano, Nicholas Fazzio, Katherine Gavinski, Heran Gebreyesus, Thomas Giarla, Marcus Gostelow, Rachel Greenstein, Hashini Gunasinghe, Casey Hanson, Amanda Hay, Tao Jian He, Katie Homa, Ruth Howe, Jeff Howenstein, Henry Huang, Aaditya Khatri, Young Lu Kim, Olivia Knowles, Sarah Kong, Rebecca Krock, Matt Kroll, Julia Kuhn, Matthew Kwong, Brandon Lee, Ryan Lee, Kevin Levine, Yedda Li, Bo Liu, Lucy Liu, Max Liu, Adam Lousararian, Jimmy Ma, Allyson Mallya, Charlie Manchee, Joseph Marcus, Stephen McDaniel, Michelle L Miller, Jerome M Molleston, Cristina Montero Diez, Patrick Ng, Natalie Ngai, Hien Nguyen, Andrew Nylander, Jason Pollack, Suchita Rastogi, Himabindu Reddy, Nathaniel Regenold, Jon Sarezky, Michael Schultz, Jien Shim, Tara Skorupa, Kenneth Smith, Sarah J Spencer, Priya Srikanth, Gabriel Stancu, Andrew P Stein, Marshall Strother, Lisa Sudmeier, Mengyang Sun, Varun Sundaram, Noor Tazudeen, Alan Tseng, Albert Tzeng, Rohit Venkat, Sandeep Venkataram, Leah Waldman, Tracy Wang, Hao Yang, Jack Y Yu, Yin Zheng, Mary L Preuss, Angelica Garcia, Matt Juergens, Robert W Morris, Alexis A Nagengast, Julie Azarewicz, Thomas J Carr, Nicole Chichearo, Mike Colgan, Megan Donegan, Bob Gardner, Nik Kolba, Janice L Krumm, Stacey Lytle, Laurell MacMillian, Mary Miller, Andrew Montgomery, Alysha Moretti, Brittney Offenbacker, Mike Polen, John Toth, John Woytanowski, Lisa Kadlec, Justin Crawford, Mary L Spratt, Ashley L Adams, Brianna K Barnard, Martin N Cheramie, Anne M Eime, Kathryn L Golden, Allyson P Hawkins, Jessica E Hill, Jessica A Kampmeier, Cody D Kern, Emily E Magnuson, Ashley R Miller, Cody M Morrow, Julia C Peairs, Gentry L Pickett, Sarah A Popelka, Alexis J Scott, Emily J Teepe, Katie A TerMeer, Carmen A Watchinski, Lucas A Watson, Rachel E Weber, Kate A Woodard, Daron C Barnard, Isaac Appiah, Michelle M Giddens, Gerard P McNeil, Adeola Adebayo, Kate Bagaeva, Justina Chinwong, Chrystel Dol, Eunice George, Kirk Haltaufderhyde, Joanna Haye, Manpreet Kaur, Max Semon, Dmitri Serjanov, Anika Toorie, Christopher Wilson, Nicole C Riddle, Jeremy Buhler, Elaine R Mardis, Sarah C R Elgin
The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution of repeats and genes, we manually improved the sequence and annotated the genes on the D. erecta, D. mojavensis, and D. grimshawi F elements and euchromatic domains from the Muller D element. We find that F elements have greater transposon density (25-50%) than euchromatic reference regions (3-11%)...
May 2015: G3: Genes—Genomes—Genetics
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