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Dynamic functional connectivity

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https://www.readbyqxmd.com/read/28528137/fuzzy-dynamic-output-feedback-h%C3%A2-control-for-continuous-time-t-s-fuzzy-systems-under-imperfect-premise-matching
#1
Tao Zhao, Songyi Dian
This paper addresses a fuzzy dynamic output feedback H∞ control design problem for continuous-time nonlinear systems via T-S fuzzy model. The stability of the fuzzy closed-loop system which is formed by a T-S fuzzy model and a fuProd. Type: FTPzzy dynamic output feedback H∞ controller connected in a closed loop is investigated with Lyapunov stability theory. The proposed fuzzy controller does not share the same membership functions and number of rules with T-S fuzzy systems, which can enhance design flexibility...
May 17, 2017: ISA Transactions
https://www.readbyqxmd.com/read/28526561/mitochondrial-contact-site-and-cristae-organizing-system-a-central-player-in-membrane-shaping-and-crosstalk
#2
Florian Wollweber, Karina von der Malsburg, Martin van der Laan
Mitochondria are multifunctional metabolic factories and integrative signaling organelles of eukaryotic cells. The structural basis for their numerous functions is a complex and dynamic double-membrane architecture. The outer membrane connects mitochondria to the cytosol and other organelles. The inner membrane is composed of a boundary region and highly folded cristae membranes. The evolutionarily conserved mitochondrial contact site and cristae organizing system (MICOS) connects the two inner membrane domains via formation and stabilization of crista junction structures...
May 16, 2017: Biochimica et Biophysica Acta
https://www.readbyqxmd.com/read/28526435/the-bidirectional-gut-brain-microbiota-axis-as-a-potential-nexus-between-traumatic-brain-injury-inflammation-and-disease
#3
Mark H Sundman, Nan-Kuei Chen, Vignesh Subbian, Ying-Hui Chou
As head injuries and their sequelae have become an increasingly salient matter of public health, experts in the field have made great progress elucidating the biological processes occurring within the brain at the moment of injury and throughout the recovery thereafter. Given the extraordinary rate at which our collective knowledge of neurotrauma has grown, new insights may be revealed by examining the existing literature across disciplines with a new perspective. This article will aim to expand the scope of this rapidly evolving field of research beyond the confines of the central nervous system (CNS)...
May 16, 2017: Brain, Behavior, and Immunity
https://www.readbyqxmd.com/read/28524190/establishing-the-link-between-fibril-formation-and-raman-optical-activity-spectra-of-insulin
#4
Jiří Kessler, Shigeki Yamamoto, Petr Bouř
Folding of proteins into insoluble amyloidal fibrils is implicated in a number of biological processes. Optical spectroscopy represents a convenient tool to monitor such structural variations. Recently, characteristic changes in Raman optical activity (ROA) spectra of insulin during a pre-fibrillar stage were reported but not supported by a theoretical model. In the present study, molecular dynamics and the density functional theory are used to simulate the spectra and understand the connection between the structure, and ROA and Raman spectral intensities...
May 19, 2017: Physical Chemistry Chemical Physics: PCCP
https://www.readbyqxmd.com/read/28523976/the-application-of-tdcs-for-the-treatment-of-psychiatric-diseases
#5
Min-Fang Kuo, Po-See Chen, Michael A Nitsche
Neuroplasticity represents the dynamic structural and functional reorganization of the central nervous system, including its connectivity, due to environmental and internal demands. It is recognized as a major physiological basis for adaption of cognition and behaviour, and, thus, of utmost importance for normal brain function. Cognitive dysfunctions are major symptoms in psychiatric disorders, which are often associated with pathological alteration of neuroplasticity. Transcranial direct current stimulation (tDCS), a recently developed non-invasive brain stimulation technique, is able to induce and modulate cortical plasticity in humans via the application of relatively weak current through the scalp of the head...
April 2017: International Review of Psychiatry
https://www.readbyqxmd.com/read/28512624/the-close-interconnection-between-mitochondrial-dynamics-and-mitophagy-in-cancer
#6
REVIEW
Matteo Bordi, Francesca Nazio, Silvia Campello
Recent decades have revealed the shape changes of mitochondria and their regulators to be main players in a plethora of physiological cell processes. Mitochondria are extremely dynamic organelles whose highly controlled morphological changes respond to specific and diverse pathophysiological needs. Thus, their qualitative control is crucial for the determination of cell function and fate. Moreover, ever-new metabolic changes, mainly attributable to mitochondrial (dys)functions, are strongly connected to cancer and its microenvironment...
2017: Frontiers in Oncology
https://www.readbyqxmd.com/read/28510210/brain-connectivity-during-encoding-and-retrieval-of-spatial-information-individual-differences-in-navigation-skills
#7
Greeshma Sharma, Klaus Gramann, Sushil Chandra, Vijander Singh, Alok Prakash Mittal
Emerging evidence suggests that the variations in the ability to navigate through any real or virtual environment are accompanied by distinct underlying cortical activations in multiple regions of the brain. These activations may appear due to the use of different frame of reference (FOR) for representing an environment. The present study investigated the brain dynamics in the good and bad navigators using Graph Theoretical analysis applied to low-density electroencephalography (EEG) data. Individual navigation skills were rated according to the performance in a virtual reality (VR)-based navigation task and the effect of navigator's proclivity towards a particular FOR on the navigation performance was explored...
May 16, 2017: Brain Informatics
https://www.readbyqxmd.com/read/28506438/prion-like-spreading-in-tauopathies
#8
REVIEW
Jacob I Ayers, Benoit I Giasson, David R Borchelt
Tau is a microtubule-associated protein that functions in regulating cytoskeleton dynamics, especially in neurons. Misfolded and aggregated forms of tau produce pathological structures in a number of neurodegenerative diseases, including Alzheimer's disease (AD) and tauopathy dementias. These disorders can present with a sporadic etiology, such as in AD, or a familial etiology, such as in some cases of frontotemporal dementia with parkinsonism. Notably, the pathological features of tau pathology in these diseases can be very distinct...
April 13, 2017: Biological Psychiatry
https://www.readbyqxmd.com/read/28505785/noise-induced-polarization-switching-in-complex-networks
#9
Jan O Haerter, Albert Díaz-Guilera, M Ángeles Serrano
The combination of bistability and noise is ubiquitous in complex systems, from biology to social interactions, and has important implications for their functioning and resilience. Here we use a simple three-state dynamical process, in which nodes go from one pole to another through an intermediate state, to show that noise can induce polarization switching in bistable systems if dynamical correlations are significant. In large, fully connected networks, where dynamical correlations can be neglected, increasing noise yields a collapse of bistability to an unpolarized configuration where the three possible states of the nodes are equally likely...
April 2017: Physical Review. E
https://www.readbyqxmd.com/read/28504641/helical-jackknives-control-the-gates-of-the-double-pore-k-uptake-system-ktrab
#10
Marina Diskowski, Ahmad Reza Mehdipour, Dorith Wunnicke, Deryck J Mills, Vedrana Mikusevic, Natalie Bärland, Jan Hoffmann, Nina Morgner, Heinz-Jürgen Steinhoff, Gerhard Hummer, Janet Vonck, Inga Haenelt
Ion channel gating is essential for cellular homeostasis and is tightly controlled. In some eukaryotic and most bacterial ligand-gated K(+) channels, RCK domains regulate ion fluxes. Until now, a single regulatory mechanism has been proposed for all RCK-regulated channels, involving signal transduction from the RCK domain to the gating area. Here we present an inactive ADP-bound structure of KtrAB from Vibrio alginolyticus, determined by cryo-electron microscopy, which, combined with EPR spectroscopy and molecular dynamics simulations, uncovers a novel regulatory mechanism for ligand-induced action at a distance...
May 15, 2017: ELife
https://www.readbyqxmd.com/read/28503829/unravelling-seed-dispersal-through-fragmented-landscapes-frugivore-species-operate-unevenly-as-mobile-links
#11
Juan P González-Varo, Carolina S Carvalho, Juan M Arroyo, Pedro Jordano
Seed dispersal constitutes a pivotal process in an increasingly fragmented world, promoting population connectivity, colonization and range shifts in plants. Unveiling how multiple frugivore species disperse seeds through fragmented landscapes, operating as mobile links, has remained elusive owing to methodological constraints for monitoring seed dispersal events. We combine for the first time DNA barcoding and DNA microsatellites to identify, respectively, the frugivore species and the source trees of animal-dispersed seeds in forest and matrix of a fragmented landscape...
May 14, 2017: Molecular Ecology
https://www.readbyqxmd.com/read/28499602/from-polyelectrolyte-complexes-to-polyelectrolyte-multilayers-electrostatic-assembly-nanostructure-dynamics-and-functional-properties
#12
Biswa P Das, Marina Tsianou
Polyelectrolyte complexes (PECs) are three-dimensional macromolecular structures formed by association of oppositely charged polyelectrolytes in solution. Polyelectrolyte multilayers (PEMs) can be considered a special case of PECs prepared by layer-by-layer (LbL) assembly that involves sequential deposition of molecular-thick polyelectrolyte layers with nanoscale control over the size, shape, composition and internal organization. Although many functional PEMs with novel physical and chemical characteristics have been developed, the current practical applications of PEMs are limited to those that require only a few bilayers and are relatively easy to prepare...
December 16, 2016: Advances in Colloid and Interface Science
https://www.readbyqxmd.com/read/28495368/the-dynamic-programming-high-order-dynamic-bayesian-networks-learning-for-identifying-effective-connectivity-in-human-brain-from-fmri
#13
Shilpa Dang, Santanu Chaudhury, Brejesh Lall, Prasun Kumar Roy
BACKGROUND: Determination of effective connectivity (EC) among brain regions using fMRI is helpful in understanding the underlying neural mechanisms. Dynamic Bayesian Networks (DBNs) are an appropriate class of probabilistic graphical temporal-models that have been used in past to model EC from fMRI, specifically order-one. NEW-METHOD: High-order DBNs (HO-DBNs) have still not been explored for fMRI data. A fundamental problem faced in the structure-learning of HO-DBN is high computational-burden and low accuracy by the existing heuristic search techniques used for EC detection from fMRI...
May 8, 2017: Journal of Neuroscience Methods
https://www.readbyqxmd.com/read/28494955/environmental-calcium-controls-alternate-physical-states-of-the-caulobacter-surface-layer
#14
Jonathan Herrmann, Fatemeh Jabbarpour, Paul G Bargar, John F Nomellini, Po-Nan Li, Thomas J Lane, Thomas M Weiss, John Smit, Lucy Shapiro, Soichi Wakatsuki
Surface layers (S-layers) are paracrystalline, proteinaceous structures found in most archaea and many bacteria. Often the outermost cell envelope component, S-layers serve diverse functions including aiding pathogenicity and protecting against predators. We report that the S-layer of Caulobacter crescentus exhibits calcium-mediated structural plasticity, switching irreversibly between an amorphous aggregate state and the crystalline state. This finding invalidates the common assumption that S-layers serve only as static wall-like structures...
May 9, 2017: Biophysical Journal
https://www.readbyqxmd.com/read/28492329/preserved-transmembrane-segment-topology-structure-and-dynamics-in-disparate-micellar-environments
#15
David N Langelaan, Aditya Pandey, Muzaddid Sarker, Jan K Rainey
Detergent micelles are frequently employed as membrane mimetics for solution-state membrane protein nuclear magnetic resonance spectroscopy. Here we compare topology, structure, ps-ns time-scale dynamics, and hydrodynamics of a model protein with one transmembrane (TM) segment (residues 1-55 of the apelin receptor, APJ, a G-protein-coupled receptor) in three distinct, commonly used micellar environments. In each environment, two solvent-protected helical segments connected by a solvent-exposed kink were observed...
May 12, 2017: Journal of Physical Chemistry Letters
https://www.readbyqxmd.com/read/28491032/topological-filtering-of-dynamic-functional-brain-networks-unfolds-informative-chronnectomics-a-novel-data-driven-thresholding-scheme-based-on-orthogonal-minimal-spanning-trees-omsts
#16
Stavros I Dimitriadis, Christos Salis, Ioannis Tarnanas, David E Linden
The human brain is a large-scale system of functionally connected brain regions. This system can be modeled as a network, or graph, by dividing the brain into a set of regions, or "nodes," and quantifying the strength of the connections between nodes, or "edges," as the temporal correlation in their patterns of activity. Network analysis, a part of graph theory, provides a set of summary statistics that can be used to describe complex brain networks in a meaningful way. The large-scale organization of the brain has features of complex networks that can be quantified using network measures from graph theory...
2017: Frontiers in Neuroinformatics
https://www.readbyqxmd.com/read/28488273/biocatalytic-self-assembly-cascades
#17
Jugal Kishore Sahoo, Charalampos G Pappas, Ivan Ramos Sasselli, Yousef M Abul-Haija, Rein V Ulijn
The properties of supramolecular materials are dictated by both kinetic and thermodynamic aspects, providing opportunities to dynamically regulate morphology and function. Herein, we demonstrate time-dependent regulation of supramolecular self-assembly by connected, kinetically competing enzymatic reactions. Starting from Fmoc-tyrosine phosphate and phenylalanine amide in the presence of an amidase and phosphatase, four distinct self-assembling molecules may be formed which each give rise to distinct morphologies (spheres, fibers, tubes/tapes and sheets)...
May 10, 2017: Angewandte Chemie
https://www.readbyqxmd.com/read/28488269/sex-specific-graphs-relating-group-specific-topology-to-demographic-and-landscape-data
#18
Philip Bertrand, Jeff Bowman, Rodney J Dyer, Micheline Manseau, Paul J Wilson
Sex-specific genetic structure is a commonly observed pattern among vertebrate species. Facing differential selective pressures, individuals may adopt sex-specific life history traits that ultimately shape genetic variation among populations. Although differential dispersal dynamics are commonly detected in the literature, few studies have used genetic structure to investigate sex-specific functional connectivity. The recent use of graph theoretic approaches in landscape genetics has demonstrated network capacities to describe complex system behaviors where network topology represents genetic interaction among sub-units...
May 10, 2017: Molecular Ecology
https://www.readbyqxmd.com/read/28485844/neuropeptides-and-neurotransmitters-that-modulate-thalamo-cortical-pathways-relevant-to-migraine-headache
#19
REVIEW
Rodrigo Noseda, David Borsook, Rami Burstein
Dynamic thalamic regulation of sensory signals allows the cortex to adjust better to rapidly changing behavioral, physiological, and environmental demands. To fulfill this role, thalamic neurons must themselves be subjected to constantly changing modulatory inputs that originate in multiple neurochemical pathways involved in autonomic, affective, and cognitive functions. This review defines a chemical framework for thinking about the complexity of factors that modulate the response properties of relay trigeminovascular thalamic neurons...
May 2017: Headache
https://www.readbyqxmd.com/read/28484899/functional-connectivity-models-for-decoding-of-spatial-representations-from-hippocampal-ca1-recordings
#20
Lorenzo Posani, Simona Cocco, Karel Ježek, Rémi Monasson
Hippocampus stores spatial representations, or maps, which are recalled each time a subject is placed in the corresponding environment. Across different environments of similar geometry, these representations show strong orthogonality in CA3 of hippocampus, whereas in the CA1 subfield a considerable overlap between the maps can be seen. The lower orthogonality decreases reliability of various decoders developed in an attempt to identify which of the stored maps is active at the moment. Especially, the problem with decoding emerges with a need to analyze data at high temporal resolution...
May 8, 2017: Journal of Computational Neuroscience
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