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Dynamic functional connectivity

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https://www.readbyqxmd.com/read/28227772/the-chronnectome-evaluating-replicability-of-dynamic-connectivity-patterns-in-7500-resting-fmri-datasets
#1
Anees Abrol, Charlotte Chaze, Eswar Damaraju, Vince D Calhoun, Anees Abrol, Charlotte Chaze, Eswar Damaraju, Vince D Calhoun, Vince D Calhoun, Eswar Damaraju, Anees Abrol, Charlotte Chaze
Functional fMRI data are typically analyzed under the assumption that participants experience one long, continuous connectivity state throughout rest scan sessions. The chronnectome is a model that takes into account the temporal variance in connectivity throughout a scan session. In this work, we evaluate the repeatability of properties of functional network connectivity (FNC) dynamics assessed using sliding-windowed correlations in 28 independent age-matched large samples of 250 subjects. This approach revealed that multiple discrete, reoccurring connectivity states arise during rest, and that subjects tend to remain in one connectivity state for long periods of time before transitioning to another...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227759/mining-cross-frequency-coupling-microstates-cfc%C3%AE-states-from-eeg-recordings-during-resting-state-and-mental-arithmetic-tasks
#2
Stavros I Dimitriadis, Yu Sun, Nitish Thakor, Anastasios Bezerianos, Stavros I Dimitriadis, Yu Sun, Nitish Thakor, Anastasios Bezerianos, Stavros I Dimitriadis, Yu Sun, Nitish Thakor, Anastasios Bezerianos
The functional brain connectivity has been studied by analyzing synchronization between dynamic oscillations of identical frequency or between different frequencies of distinct brain areas. It has been hypothesized that cross-frequency coupling (CFC) between different frequency bands is the carrier mechanism for the coordination of global and local neural processes and hence supports the distributed information processing in the brain. In the present study, we attempt to study the dynamic evolution of CFC at resting-state and during a mental task...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227758/mining-cross-frequency-coupling-microstates-from-resting-state-meg-an-application-to-mild-traumatic-brain-injury
#3
Marios Antonakakis, Stavros I Dimitriadis, Michalis Zervakis, Andrew C Papanicolaou, George Zouridakis, Marios Antonakakis, Stavros I Dimitriadis, Michalis Zervakis, Andrew C Papanicolaou, George Zouridakis, Michalis Zervakis, Marios Antonakakis, George Zouridakis, Andrew C Papanicolaou, Stavros I Dimitriadis
Recent studies have investigated the possible role of dynamic functional connectivity and the role of cross-frequency coupling (CFC) to provide the substrate for reliable biomarkers of brain disorders. In this study, we analyzed time-varying CFC profiles from resting state Magnetoencephal-ographic recordings of 30 mild Traumatic Brain Injury (mTBI) patients and 50 normal controls. Interactions among sensors at specific pairs of frequency bands were computed via estimation of phase-to-amplitude couplings. We then computed time-varying functional connectivity graphs that were described in terms of segregation (local efficiency, LE) and integration (global efficiency, GE) and mapped those graphs to time series of GE/LE estimates...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227526/valence-dependent-changes-in-visual-arousing-elicitation-an-exploratory-study-in-eeg-gamma-oscillations
#4
Alberto Greco, Gaetano Valenza, Enzo Pasquale Scilingo, Alberto Greco, Gaetano Valenza, Enzo Pasquale Scilingo, Gaetano Valenza, Enzo Pasquale Scilingo, Alberto Greco
Emotion regulation involves several brain areas such as prefrontal cortex, amygdala, and insular cortex. However, considering different levels of arousing elicitations, how such a brain dynamics is affected by emotional pleasant/unpleasant (valence) elicitation is not fully understood. To this aim, we propose an Electroencephalographic (EEG)-based preliminary study in which 22 healthy subjects were elicited through affective pictures gathered from the International Affective Picture System. Considering 4 arousing levels, each of which including two valence levels (pleasant and unpleasant), we investigated EEG power spectra and functional connectivity...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227091/hybrid-bci-approach-to-control-an-artificial-tibio-femoral-joint
#5
Luis Mercado, Angel Rodriguez-Linan, Luis M Torres-Trevino, G Quiroz, Luis Mercado, Angel Rodriguez-Linan, Luis M Torres-Trevino, G Quiroz, Luis Mercado, Angel Rodriguez-Linan, Luis M Torres-Trevino, G Quiroz
Brain-Computer Interfaces (BCIs) for disabled people should allow them to use their remaining functionalities as control possibilities. BCIs connect the brain with external devices to perform the volition or intent of movement, regardless if that individual is unable to perform the task due to body impairments. In this work we fuse electromyographic (EMG) with electroencephalographic (EEG) activity in a framework called "Hybrid-BCI" (hBCI) approach to control the movement of a simulated tibio-femoral joint...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28227001/mechanism-for-safe-remote-activation-of-networked-surgical-and-poc-devices-using-dynamic-assignable-controls
#6
Martin Kasparick, Max Rockstroh, Stefan Schlichting, Frank Golatowski, Dirk Timmermann, Martin Kasparick, Max Rockstroh, Stefan Schlichting, Frank Golatowski, Dirk Timmermann, Stefan Schlichting, Martin Kasparick, Max Rockstroh, Frank Golatowski, Dirk Timmermann
The number of devices within an operating room (OR) increases continuously as well as the complexity of the complete system. One key enabler to handle the complexity is an interoperable and vendor independent system of networked medical devices. To build up such an interoperable system we use the proposed IEEE 11073 SDC standards (IEEE P11073-10207, -20701, -20702) for networked point-of-care (PoC) and surgical devices. One of the major problems within the OR is that typically every device has its own control unit...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28226817/effective-connectivity-matrix-for-neural-ensembles
#7
Qi She, Winnie K Y So, Rosa H M Chan, Qi She, Winnie K Y So, Rosa H M Chan, Rosa H M Chan, Qi She, Winnie K Y So
In this paper, we present an efficient framework to study the directional interactions within the multiple-input multiple-output (MIMO) biological neural network from spiketrain data. We used an efficient generalized linear model (GLM) with Laguerre basis functions to model a MIMO neural system, and developed an Effective Connectivity Matrix (ECM) to visualize excitatory and inhibitory connections within the neural network. A new causality representation was developed based on system dynamics. Statistical test was applied to identify the significance of the measured causality...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28226700/adaptive-change-point-detection-of-dynamic-functional-connectivity-networks
#8
Sadia Shakil, Sheila D Keilholz, Chin-Hui Lee, Sadia Shakil, Sheila D Keilholz, Chin-Hui Lee, Shella D Keilholz, Chin-Hui Lee, Sadia Shakil
This study presents a new algorithm to adaptively detect change points of functional connectivity networks in the brain. It uses scans from resting-state functional magnetic resonance imaging (rsfMRI) which is one of the major tools to investigate intrinsic brain functionality. Different regions of the resting brain form networks that change states within a few seconds to minutes. The change points of these networks are different in normal and disordered brain functions and their understanding can help in identification of brain disorders...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28226596/quantification-of-neural-functional-connectivity-during-an-active-avoidance-task
#9
Catia S Silva, Mehrnaz K Hazrati, Andreas Keil, Jose C Principe, Catia S Silva, Mehrnaz K Hazrati, Andreas Keil, Jose C Principe, Andreas Keil, Jose C Principe, Mehrnaz K Hazrati, Catia S Silva
Many behavioral and cognitive processes are associated with spatiotemporal dynamic communication between brain areas. Thus, the quantification of functional connectivity with high temporal resolution is highly desirable for capturing in vivo brain function. However, brain functional network quantification from EEG recordings has been commonly used in a qualitative manner. In this paper, we consider pairwise dependence measures as random variables and estimate the pdf for each electrode of the arrangement. A metric imposed by the quadratic Cauchy-Schwartz Mutual Information quantifies these pdfs...
August 2016: Conference Proceedings: Annual International Conference of the IEEE Engineering in Medicine and Biology Society
https://www.readbyqxmd.com/read/28226275/short-term-cerebral-activity-alterations-after-surgery-in-patients-with-unilateral-mesial-temporal-lobe-epilepsy-associated-with-hippocampal-sclerosis-a-longitudinal-resting-state-fmri-study
#10
Yingying Tang, Wei Xia, Xiaofeng Yu, Bo Zhou, Chunyan Luo, Xiaoqi Huang, Qin Chen, Qiyong Gong, Dong Zhou
PURPOSE: Mesial temporal lobe epilepsy with hippocampal sclerosis (MTLE-HS), as a brain network disorder, has given increased importance to resective surgery. We aimed to examine the short-term postoperative functional network reorganization in patients with unilateral MTLE-HS using resting-state functional magnetic resonance imaging (Rs-fMRI) data with a longitudinal design. METHOD: Seventeen (10 right-side and 7 left-side) patients with unilateral MTLE-HS were recruited...
January 3, 2017: Seizure: the Journal of the British Epilepsy Association
https://www.readbyqxmd.com/read/28226233/chemical-genetic-dissection-of-membrane-trafficking
#11
Lorena Norambuena, Ricardo Tejos
The plant endomembrane system is an extensively connected functional unit for exchanging material between compartments. Secretory and endocytic pathways allow dynamic trafficking of proteins, lipids, and other molecules, regulating a myriad of biological processes. Chemical genetics-the use of compounds to perturb biological processes in a fast, tunable, and transient manner-provides elegant tools for investigating this system. Here, we review how chemical genetics has helped to elucidate different aspects of membrane trafficking...
February 13, 2017: Annual Review of Plant Biology
https://www.readbyqxmd.com/read/28226222/computer-simulations-of-intrinsically-disordered-proteins
#12
Song-Ho Chong, Prathit Chatterjee, Sihyun Ham
The investigation of intrinsically disordered proteins (IDPs) is a new frontier in structural and molecular biology that requires a new paradigm to connect structural disorder to function. Molecular dynamics simulations and statistical thermodynamics potentially offer ideal tools for atomic-level characterizations and thermodynamic descriptions of this fascinating class of proteins that will complement experimental studies. However, IDPs display sensitivity to inaccuracies in the underlying molecular mechanics force fields...
February 6, 2017: Annual Review of Physical Chemistry
https://www.readbyqxmd.com/read/28226217/sulfation-of-glycosaminoglycans-and-its-implications-in-human-health-and-disorders
#13
Diana Soares da Costa, Rui L Reis, Iva Pashkuleva
Sulfation is a dynamic and complex posttranslational modification process. It can occur at various positions within the glycosaminoglycan (GAG) backbone and modulates extracellular signals such as cell-cell and cell-matrix interactions; different sulfation patterns have been identified for the same organs and cells during their development. Because of their high specificity in relation to function,GAGsulfation patterns are referred to as the sulfation code. This review explores the role of GAG sulfation in different biological processes at the cell, tissue, and organism levels...
February 2, 2017: Annual Review of Biomedical Engineering
https://www.readbyqxmd.com/read/28224285/abnormal-effective-connectivity-in-the-brain-is-involved-in-auditory-verbal-hallucinations-in-schizophrenia
#14
Baojuan Li, Long-Biao Cui, Yi-Bin Xi, Karl J Friston, Fan Guo, Hua-Ning Wang, Lin-Chuan Zhang, Yuan-Han Bai, Qing-Rong Tan, Hong Yin, Hongbing Lu
Information flow among auditory and language processing-related regions implicated in the pathophysiology of auditory verbal hallucinations (AVHs) in schizophrenia (SZ) remains unclear. In this study, we used stochastic dynamic causal modeling (sDCM) to quantify connections among the left dorsolateral prefrontal cortex (inner speech monitoring), auditory cortex (auditory processing), hippocampus (memory retrieval), thalamus (information filtering), and Broca's area (language production) in 17 first-episode drug-naïve SZ patients with AVHs, 15 without AVHs, and 19 healthy controls using resting-state functional magnetic resonance imaging...
February 21, 2017: Neuroscience Bulletin
https://www.readbyqxmd.com/read/28221775/electrostatic-interactions-as-mediators-in-the-allosteric-activation-of-pka-ri%C3%AE
#15
Emilia Pecora de Barros, Robert D Malmstrom, Kimya Nourbakhsh, Jason Cruz Del Rio, Alexandr P Kornev, Susan S Taylor, Rommie E Amaro
Close-range electrostatic interactions that form salt bridges are key components of protein stability. Here we investigate the role of these charged interactions in modulating the allosteric activation of Protein Kinase A (PKA) via computational and experimental mutational studies on a conserved basic patch located in the regulatory subunit's B/C helix. Molecular dynamics simulations evidenced the presence of an extended network of fluctuating salt bridges spanning the helix and connecting the two cAMP binding domains in its extremities...
February 21, 2017: Biochemistry
https://www.readbyqxmd.com/read/28221361/dynamic-control-of-chirality-and-self-assembly-of-double-stranded-helicates-with-light
#16
Depeng Zhao, Thomas van Leeuwen, Jinling Cheng, Ben L Feringa
Helicity switching in biological and artificial systems is a fundamental process that allows for the dynamic control of structures and their functions. In contrast to chemical approaches to responsive behaviour in helicates, the use of light as an external stimulus offers unique opportunities to invert the chirality of helical structures in a non-invasive manner with high spatiotemporal precision. Here, we report that unidirectional rotary motors with connecting oligobipyridyl ligands, which can dynamically change their chirality upon irradiation, assemble into metal helicates that are responsive to light...
March 2017: Nature Chemistry
https://www.readbyqxmd.com/read/28220695/a-single-crystal-with-multiple-functions-of-optical-waveguide-aie-and-mechanochromism
#17
Yan Li, Zhiyong Ma, Aisen Li, Weiqing Xu, Yuechao Wang, Hong Jiang, Kang Wang, Yong Sheng Zhao, Xinru Jia
A novel single crystal PyB is produced in a high yield by a simple method of connecting a pyrene unit and a rhodamine B moiety together. PyB shows multiple functions of AIE, low-loss optical waveguiding and tricolored mechanochromism. The crucial point for fabricating such a multifunctional single crystal is selecting C=N group as a spacer, which simplifies the synthetic procedure, confines the molecular conformation to develop single crystals, and allows to dynamically observe the color variation in-situ and quantitatively analyze the effect of applied pressures...
February 21, 2017: ACS Applied Materials & Interfaces
https://www.readbyqxmd.com/read/28220083/risperidone-effects-on-brain-dynamic-connectivity-a-prospective-resting-state-fmri-study-in-schizophrenia
#18
Kristin K Lottman, Nina V Kraguljac, David M White, Charity J Morgan, Vince D Calhoun, Allison Butt, Adrienne C Lahti
Resting-state functional connectivity studies in schizophrenia evaluating average connectivity over the entire experiment have reported aberrant network integration, but findings are variable. Examining time-varying (dynamic) functional connectivity may help explain some inconsistencies. We assessed dynamic network connectivity using resting-state functional MRI in patients with schizophrenia, while unmedicated (n = 34), after 1 week (n = 29) and 6 weeks of treatment with risperidone (n = 24), as well as matched controls at baseline (n = 35) and after 6 weeks (n = 19)...
2017: Frontiers in Psychiatry
https://www.readbyqxmd.com/read/28220063/vibrotactile-discrimination-training-affects-brain-connectivity-in-profoundly-deaf-individuals
#19
Andrés A González-Garrido, Vanessa D Ruiz-Stovel, Fabiola R Gómez-Velázquez, Hugo Vélez-Pérez, Rebeca Romo-Vázquez, Ricardo A Salido-Ruiz, Aurora Espinoza-Valdez, Luis R Campos
Early auditory deprivation has serious neurodevelopmental and cognitive repercussions largely derived from impoverished and delayed language acquisition. These conditions may be associated with early changes in brain connectivity. Vibrotactile stimulation is a sensory substitution method that allows perception and discrimination of sound, and even speech. To clarify the efficacy of this approach, a vibrotactile oddball task with 700 and 900 Hz pure-tones as stimuli [counterbalanced as target (T: 20% of the total) and non-target (NT: 80%)] with simultaneous EEG recording was performed by 14 profoundly deaf and 14 normal-hearing (NH) subjects, before and after a short training period (five 1-h sessions; in 2...
2017: Frontiers in Human Neuroscience
https://www.readbyqxmd.com/read/28215341/dissection-and-characterization-of-microtubule-bundles-in-the-mitotic-spindle-using-femtosecond-laser-ablation
#20
R Buđa, K Vukušić, I M Tolić
The mitotic spindle is a highly organized and dynamic structure required for segregation of the genetic material into two daughter cells. Although most of the individual players involved in building the spindle have been characterized in vitro, a general understanding of how all of the spindle players act together in vivo is still missing. Hence, in recent years, experiments have focused on introducing mechanical perturbations of the spindle on a micron scale, thereby providing insight into its function and organization, as well as into forces acting in the spindle...
2017: Methods in Cell Biology
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