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Granger causality

Michael F Regner, Naomi Saenz, Keeran Maharajh, Dorothy J Yamamoto, Brianne Mohl, Korey Wylie, Jason Tregellas, Jody Tanabe
OBJECTIVE: We hypothesized that compared to healthy controls, long-term abstinent substance dependent individuals (SDI) will differ in their effective connectivity between large-scale brain networks and demonstrate increased directional information from executive control to interoception-, reward-, and habit-related networks. In addition, using graph theory to compare network efficiencies we predicted decreased small-worldness in SDI compared to controls. METHODS: 50 SDI and 50 controls of similar sex and age completed psychological surveys and resting state fMRI...
2016: PloS One
Ana Coito, Christoph M Michel, Pieter van Mierlo, Serge Vulliemoz, Gijs Plomp
: The importance of functional brain connectivity to study physiological and pathological brain activity has been widely recognized. Here, we aimed to 1) review a methodological pipeline to investigate directed functional connectivity between brain regions using source signals derived from high-density EEG; 2) elaborate on some methodological challenges; 3) apply this pipeline to temporal lobe epilepsy (TLE) patients and healthy controls to investigate directed functional connectivity differences in the theta and beta frequency bands during EEG epochs without visible pathological activity...
October 20, 2016: IEEE Transactions on Bio-medical Engineering
Yajing Pang, Qian Cui, Yifeng Wang, Yuyan Chen, Xiaona Wang, Shaoqiang Han, Zhiqiang Zhang, Guangming Lu, Huafu Chen
The amygdala plays a key role in emotion processing. Its functional connectivity with other brain regions has been extensively demonstrated to be associated with extraversion and neuroticism. However, how the amygdala affects other regions and is affected by others within these connectivity patterns associated with extraversion and neuroticism remains unclear. To address this issue, we investigated the effective connectivity of the amygdala using Granger causality analysis on the resting-state functional magnetic resonance imaging data of 70 participants...
October 21, 2016: Scientific Reports
Abbas Sohrabpour, Shuai Ye, Gregory A Worrell, Wenbo Zhang, Bin He
: Combined source imaging techniques and directional connectivity analysis can provide useful information about the underlying brain networks in a noninvasive fashion. Source imaging techniques have been used successfully to either determine the source of activity or to extract source time-courses for Granger causality analysis, previously. In this work, we utilize source imaging algorithms to both find the network nodes (regions of interest) and then extract the activation time series for further Granger causality analysis...
October 11, 2016: IEEE Transactions on Bio-medical Engineering
Bethany Lusch, Pedro D Maia, J Nathan Kutz
Determining the interactions and causal relationships between nodes in an unknown networked dynamical system from measurement data alone is a challenging, contemporary task across the physical, biological, and engineering sciences. Statistical methods, such as the increasingly popular Granger causality, are being broadly applied for data-driven discovery of connectivity in fields from economics to neuroscience. A common version of the algorithm is called pairwise-conditional Granger causality, which we systematically test on data generated from a nonlinear model with known causal network structure...
September 2016: Physical Review. E
F Vallone, E Vannini, A Cintio, M Caleo, A Di Garbo
Epilepsy is characterized by substantial network rearrangements leading to spontaneous seizures and little is known on how an epileptogenic focus impacts on neural activity in the contralateral hemisphere. Here, we used a model of unilateral epilepsy induced by injection of the synaptic blocker tetanus neurotoxin (TeNT) in the mouse primary visual cortex (V1). Local field potential (LFP) signals were simultaneously recorded from both hemispheres of each mouse in acute phase (peak of toxin action) and chronic condition (completion of TeNT effects)...
September 2016: Physical Review. E
Harun Uçak
One of the consequences of globalisation for Turkey, as well as in other emerging countries, has been an increasing trend in health tourism. Households have been considered choice the best option in terms of price and alternative possibilities while they have been solved their health problems. Previous studies have argued that the main drivers of the growth of inbound health tourism to developing countries are lower costs, shorter waiting periods, and better quality of care. This study aimed to test the effect of health and social service sector growth on the flow of inbound health tourism between 2004:Q1 and 2015:Q4 by employing Granger causality and Johansen cointegration approaches...
2016: SpringerPlus
Marina V Sysoeva, Lyudmila V Vinogradova, Galina D Kuznetsova, Ilya V Sysoev, Clementina M van Rijn
PURPOSE: Spike-and-wave discharges (SWDs) recorded in the cortical EEGs of WAG/Rij rats are the hallmark for absence epilepsy in this model. Although this type of epilepsy was long regarded as a form of primary generalized epilepsy, it is now recognized that there is an initiation zone - the perioral region of the somatosensory cortex. However, networks involved in spreading the seizure are not yet fully known. Previously, the dynamics of coupling between different layers of the perioral cortical region and between these zones and different thalamic nuclei was studied in time windows around the SWDs, using nonlinear Granger causality...
October 8, 2016: Epilepsy & Behavior: E&B
Sung Kwang Hong, Sejik Park, Min-Hee Ahn, Byoung-Kyong Min
Although a peripheral auditory (bottom-up) deficit is an essential prerequisite for the generation of tinnitus, central cognitive (top-down) impairment has also been shown to be an inherent neuropathological mechanism. Using an auditory oddball paradigm (for top-down analyses) and a passive listening paradigm (for bottom-up analyses) while recording electroencephalograms (EEGs), we investigated whether top-down or bottom-up components were more critical in the neuropathology of tinnitus, independent of peripheral hearing loss...
October 8, 2016: Hearing Research
Guifei Zhou, Jiangang Liu, Xiao Pan Ding, Genyue Fu, Kang Lee
Numerous developmental studies have suggested that other-race effect (ORE) in face recognition emerges as early as in infancy and develops steadily throughout childhood. However, there is very limited research on the neural mechanisms underlying this developmental ORE. The present study used Granger causality analysis (GCA) to examine the development of children's cortical networks in processing own- and other-race faces. Children were between 3 and 13 years. An old-new paradigm was used to assess their own- and other-race face recognition with ETG-4000 (Hitachi Medical Co...
2016: Frontiers in Human Neuroscience
Guangdong Li, Chuanglin Fang, Shaojian Wang, Siao Sun
Rapid economic growth, industrialization, and urbanization in China has led to extremely severe air pollution that causes increasing negative effects on human health, visibility, and climate change. However, the influence mechanisms of these anthropogenic factors on fine particulate matter (PM2.5) concentrations are poorly understood. In this study, we combined panel data and econometric methods to investigate the main anthropogenic factors that contribute to increasing PM2.5 concentrations in China at the prefecture level from 1999 to 2011...
October 6, 2016: Environmental Science & Technology
Yafeng Pan, Xiaojun Cheng, Zhenxin Zhang, Xianchun Li, Yi Hu
This study investigated interactive exchange in lovers and the associated interpersonal brain synchronization (IBS) using functional near-infrared spectroscopy (fNIRS)-based hyperscanning. Three types of female-male dyads, lovers, friends, and strangers, performed a cooperation task during which brain activity was recorded in right frontoparietal regions. We measured better cooperative behavior in lover dyads compared with friend and stranger dyads. Lover dyads demonstrated increased IBS in right superior frontal cortex, which also covaried with their task performance...
October 4, 2016: Human Brain Mapping
Sarina J Iwabuchi, Felix Raschke, Dorothee P Auer, Peter F Liddle, Sudheer T Lankappa, Lena Palaniyappan
Repetitive transcranial magnetic stimulation (rTMS) has been used worldwide to treat depression. However, the exact physiological effects are not well understood. Pathophysiology of depression involves crucial limbic structures (e.g. insula), and it is still not clear if these structures can be modulated through neurostimulation of surface regions (e.g. dorsolateral prefrontal cortex, DLPFC), and whether rTMS-induced excitatory/inhibitory transmission alterations relate to fronto-limbic connectivity changes...
September 17, 2016: NeuroImage
Mei Sheng Duh, Pierre Cremieux, Marc Van Audenrode, Francis Vekeman, Paul Karner, Haimin Zhang, Paul Greenberg
PURPOSE: To compare the patient characteristics and the inter-temporal reporting patterns of adverse events (AEs) for atorvastatin (Lipitor(®) ) and sibutramine (Meridia(®) ) in social media ( versus the FDA Adverse Event Reporting System (FAERS). METHODS: We identified clinically important AEs associated with atorvastatin (muscle pain) and sibutramine (cardiovascular AEs), compared their patterns in social media postings versus FAERS and used Granger causality tests to assess whether social media postings were useful in forecasting FAERS reports...
September 7, 2016: Pharmacoepidemiology and Drug Safety
David W Gow, Bruna B Olson
Sentential context influences the way that listeners identify phonetically ambiguous or perceptual degraded speech sounds. Unfortunately, inherent inferential limitations on the interpretation of behavioral or BOLD imaging results make it unclear whether context influences perceptual processing directly, or acts at a post-perceptual decision stage. In this paper, we use Kalman-filter enabled Granger causation analysis of MR-constrained MEG/EEG data to distinguish between these possibilities. Using a retrospective probe verification task, we found that sentential context strongly affected the interpretation of words with ambiguous initial voicing (e...
2016: Language, Cognition and Neuroscience
Qiang Zhu, Weiwei Cai, Jianyong Zheng, Guanya Li, Qianqian Meng, Qiaoyun Liu, Jizheng Zhao, Karen M von Deneen, Yuanyuan Wang, Guangbin Cui, Shijun Duan, Yu Han, Huaning Wang, Jie Tian, Yi Zhang, Yongzhan Nie
Functional constipation (FC) is a common functional gastrointestinal disorder (FGID) with a higher prevalence in clinical practice. The primary brain regions involved in emotional arousal regulation, somatic, sensory and motor control processing have been identified with neuroimaging in FGID. It remains unclear how these factors interact to influence the baseline brain activity of patients with FC. In the current study, we combined resting-state fMRI (RS-fMRI) with Granger causality analysis (GCA) to investigate the causal interactions of the brain areas in 14 patients with FC and in 26 healthy controls (HC)...
October 6, 2016: Neuroscience Letters
Chunming Xie, Lisha Ma, Nan Jiang, Ruyan Huang, Li Li, Liang Gong, Cancan He, Chaoyong Xiao, Wen Liu, Shu Xu, Zhijun Zhang
Altered reward processing and cognitive deficits are often observed in patients with obsessive-compulsive disorder (OCD); however, whether the imbalance in activity between reward circuits and the cognitive control (CC) system is associated with compulsive behavior remains unknown. Sixty-eight OCD patients and 33 cognitively normal (CN) healthy subjects participated in this resting-state functional magnetic resonance imaging study. Alterations in the functional connectivity between reward circuits and the CC system were quantitatively assessed and compared between the groups...
August 23, 2016: Brain Imaging and Behavior
Maobin Wei, Jiaolong Qin, Rui Yan, Kun Bi, Chu Liu, Zhijian Yao, Qing Lu
PURPOSE: To detect the consecutive variations of the internetwork interactions over time, which helps to discover the underlying dysfunction of depressive disorders. Abnormal interactions of resting-state functional networks have been reported in depression. However, little is known regarding the dynamics of how these crucial networks interact and the disease-related dysfunction. MATERIALS AND METHODS: Functional magnetic resonance imaging data at 3.0T in the resting state were acquired from 20 depressed patients and 20 healthy controls...
August 17, 2016: Journal of Magnetic Resonance Imaging: JMRI
Fei Xue, Guangzhan Fang, Xizi Yue, Ermi Zhao, Steven E Brauth, Yezhong Tang
Resting-state networks (RSNs) refer to the spontaneous brain activity generated under resting conditions, which maintain the dynamic connectivity of functional brain networks for automatic perception or higher order cognitive functions. Here, Granger causal connectivity analysis (GCCA) was used to explore brain RSNs in the music frog (Babina daunchina) during different behavioral activity phases. The results reveal that a causal network in the frog brain can be identified during the resting state which reflects both brain lateralization and sexual dimorphism...
August 13, 2016: Neuroscience
Stéphane Potvin, Ovidiu Lungu, Andràs Tikàsz, Adrianna Mendrek
BACKGROUND: Schizophrenia is associated with core emotional dysfunctions. At the neural level, functional neuro-imaging studies have highlighted fronto-limbic alterations during emotion processing in schizophrenia, as well as impaired connectivity between the amygdala and the prefrontal cortex. However, the direction of the impaired fronto-limbic connections remains largely unknown. To clarify this issue, we performed an effective connectivity study on emotion processing in schizophrenia...
January 4, 2017: Progress in Neuro-psychopharmacology & Biological Psychiatry
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