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https://www.readbyqxmd.com/read/28646449/occurrence-of-pepper-mild-mottle-virus-pmmov-in-groundwater-from-a-karst-aquifer-system-in-the-yucatan-peninsula-mexico
#1
Gabriela Rosiles-González, Gerardo Ávila-Torres, Oscar A Moreno-Valenzuela, Gilberto Acosta-González, Rosa María Leal-Bautista, Cinthya D Grimaldo-Hernández, Judith K Brown, Cristóbal Chaidez-Quiroz, Walter Q Betancourt, Charles P Gerba, Cecilia Hernández-Zepeda
The Yucatan Peninsula of Mexico hosts a karst aquifer system that is the only source of freshwater for the area; however, it is vulnerable to human-mediated contamination. Pepper mild mottle virus (PMMoV) is one of the most abundant RNA viruses associated with human feces, making it a viable indicator for tracking fecal pollution in aquatic environments, including groundwater. In this study, groundwater samples collected from a karst aquifer from fresh and brackish water locations were analyzed for fecal indicator bacteria, somatic and male F+ specific coliphages, and PMMoV during the rainy and dry seasons...
June 23, 2017: Food and Environmental Virology
https://www.readbyqxmd.com/read/28641580/marked-regional-endothelial-dysfunction-in-mottled-skin-area-in-patients-with-severe-infections
#2
Simon Bourcier, Jérémie Joffre, Vincent Dubée, Gabriel Preda, Jean-Luc Baudel, Naïke Bigé, Guillaume Leblanc, Bernard I Levy, Bertrand Guidet, Eric Maury, Hafid Ait-Oufella
BACKGROUND: Mottling around the knee, reflecting a reduced skin blood flow, is predictive of mortality in patients with septic shock. However, the causative pathophysiology of mottling remains unknown. We hypothesized that the cutaneous hypoperfusion observed in the mottled area is related to regional endothelial dysfunction. METHODS: This was a prospective, observational study in a medical ICU in a tertiary teaching hospital. Consecutive adult patients with sepsis admitted to ICU were included...
June 23, 2017: Critical Care: the Official Journal of the Critical Care Forum
https://www.readbyqxmd.com/read/28638259/global-alert-zika-virus-an-emerging-arbovirus
#3
REVIEW
Zulal Ozkurt, Esra Cinar Tanriverdi
Zika virus (ZIKV) is an arbovirus of the Flavivirus genus, and it has an envelope and a single RNA molecule. In early 2016, the World Health Organization declared ZIKV infection to be an emerging global health threat. The major transmission route of the virus to humans is Aedes mosquitoes. ZIKV can be transmitted between humans by transplacental, perinatal, and sexual routes and via blood and body fluids. ZIKV infection usually results in a mild and self-limiting disease with low-grade fever, conjunctivitis, and periorbital edema...
June 2017: Eurasian Journal of Medicine
https://www.readbyqxmd.com/read/28633633/utilization-and-farmers-knowledge-on-pigeonpea-diversity-in-benin-west-africa
#4
Mathieu Anatole Tele Ayenan, Agyemang Danquah, Léonard Essehou Ahoton, Kwadwo Ofori
BACKGROUND: Understanding factors driving farmers' uses of crop genetic resources is a key component not only to design appropriate conservation strategies but also to promote sustainable production. However, in Benin, limited information is available on farmers' knowledge related to pigeonpea uses and conservation. This study aimed at i) identifying and investigating the different uses of pigeonpea in relation with socio-cultural factors, namely age, gender, ethnic group and respondents' residence, ii) assessing pigeonpea varieties richness at household level and iii) evaluating the extent and distribution of pigeonpea varieties...
June 20, 2017: Journal of Ethnobiology and Ethnomedicine
https://www.readbyqxmd.com/read/28631927/stabilization-of-a-virus-like-particle-and-its-application-as-a-nanoreactor-at-physiological-conditions
#5
Lise Schoonen, Sjors Maassen, Roeland J M Nolte, Jan C M van Hest
Virus-like particles are very interesting tools for application in bio-nanotechnology, due to their monodisperse features and biocompatibility. In particular, the cowpea chlorotic mottle virus (CCMV) capsid has been studied extensively as it can be assembled and disassembled reversibly, facilitating cargo encapsulation. CCMV is, however, only stable at physiological conditions when its endogenous nucleic acid cargo is present. To gain more flexibility in the type of cargo encapsulated and to broaden the window of operation, it is interesting to improve the stability of the empty virus-like particles...
June 20, 2017: Biomacromolecules
https://www.readbyqxmd.com/read/28629946/phytol-induced-pathology-in-2-hydroxyacyl-coa-lyase-hacl1-deficient-mice-evidence-for-a-second-non-hacl1-related-lyase
#6
Serena Mezzar, Evelyn De Schryver, Stanny Asselberghs, Els Meyhi, Petruta L Morvay, Myriam Baes, Paul P Van Veldhoven
2-Hydroxyacyl-CoA lyase (HACL1) is a key enzyme of the peroxisomal α-oxidation of phytanic acid. To better understand its role in health and disease, a mouse model lacking HACL1 was investigated. Under normal conditions, these mice did not display a particular phenotype. However, upon dietary administration of phytol, phytanic acid accumulated in tissues, mainly in liver and serum of KO mice. As a consequence of phytanic acid (or a metabolite) toxicity, KO mice displayed a significant weight loss, absence of abdominal white adipose tissue, enlarged and mottled liver and reduced hepatic glycogen and triglycerides...
June 16, 2017: Biochimica et Biophysica Acta
https://www.readbyqxmd.com/read/28610314/two-new-pseudoceros-polycladida-pseudocerotidae-and-a-prostheceraeus-polycladida-euryleptidae-from-andaman-and-nicobar-islands-india
#7
Sudhanshu Dixit, C Raghunathan, Kailash Chandra
Polyclads are free-living marine flatworms known for their striking colour and patterns. These animals though frequently encountered are still understudied in the Indian context. The present paper describes three new species, two belonging to the genus Pseudoceros Lang, 1884 and one to the genus Prostheceraeus Schmarda, 1859. Pseudoceros auranticrinis sp. nov. is characterised by whitish cream background colour, brown mottling with numerous white and dark brown spots all over the body except margins and a smooth dorsal surface with orange pseudotentacles, Pseudoceros vishnui sp...
May 24, 2017: Zootaxa
https://www.readbyqxmd.com/read/28610046/-i-oxynoemacheilus-i-i-hazarensis-i-a-new-species-from-lake-hazar-in-turkey-with-remarks-on-i-o-euphraticus-i-teleostei-nemacheilidae
#8
Jörg Freyhof, Müfit Özuluğ
Oxynoemacheilus hazarensis, new species, from Lake Hazar in the Turkish Tigris drainage, is distinguished from other Oxynoemacheilus in the Tigris drainage by having the combination of a slightly emarginate caudal fin, no suborbital groove in males, an incomplete lateral line, no scales on the back and flank in front of the anus, the maxillary barbel reaching beyond the middle of the eye, an incision in the middle of the upper lip, and the colour pattern on the flank mottled, not interrupted by an unpigmented zone along the lateral line...
March 28, 2017: Zootaxa
https://www.readbyqxmd.com/read/28592947/efficacy-of-tissue-culture-in-virus-elimination-from-caprifig-and-female-fig-varieties-ficus-carica-l
#9
Chokri Bayoudh, Manel Elair, Rahma Labidi, Afifa Majdoub, Naima Mahfoudhi, Messaoud Mars
Fig mosaic disease (FMD) is a viral disease that spreads in all Tunisian fig (Ficus carica L.) orchards. RT-PCR technique was applied to leaf samples of 29 fig accessions of 15 fig varieties from the fig germplasm collection of High Agronomic Institute (I.S.A) of Chatt-Mariem, to detect viruses associated to FMD. Analysis results show that 65.5% of the accessions (19/29) and 80.0% (12/15) of the fig varieties are infected by FMD-associated viruses. From all fig accessions, 41.4% of them are with single infection (one virus) and 24...
June 2017: Plant Pathology Journal
https://www.readbyqxmd.com/read/28590876/cucumber-green-mottle-mosaic-virus-rapidly-increasing-global-distribution-etiology-epidemiology-and-management
#10
Aviv Dombrovsky, Lucy T T Tran-Nguyen, Roger A C Jones
Cucumber green mottle mosaic virus (CGMMV) was first described in 1935 infecting cucumber, making it one of the first plant viruses to be described. Its initial distribution occurred out of England to other countries. This was followed by its subsequent distribution from England and these other countries. This process increased slowly between 1935 and 1985, faster between 1986 and 2006, and rapidly between 2007 and 2016. The discovery that it diminished cucurbit fruit yields and quality, especially of watermelon, prompted a substantial research effort in worst-affected countries...
June 7, 2017: Annual Review of Phytopathology
https://www.readbyqxmd.com/read/28570301/clinical-examination-for-diagnosing-circulatory-shock
#11
Bart Hiemstra, Ruben J Eck, Frederik Keus, Iwan C C van der Horst
PURPOSE OF REVIEW: In the acute setting of circulatory shock, physicians largely depend on clinical examination and basic laboratory values. The daily use of clinical examination for diagnostic purposes contrasts sharp with the limited number of studies. We aim to provide an overview of the diagnostic accuracy of clinical examination in estimating circulatory shock reflected by an inadequate cardiac output (CO). RECENT FINDINGS: Recent studies showed poor correlations between CO and mottling, capillary refill time or central-to-peripheral temperature gradients in univariable analyses...
June 7, 2017: Current Opinion in Critical Care
https://www.readbyqxmd.com/read/28554178/vitamin-d-and-albuminuria-in-youth-with-and-without-type-1-diabetes
#12
Debika Nandi-Munshi, Maryam Afkarian, Kathryn B Whitlock, Jamie L Crandell, Ronny A Bell, Ralph D'Agostino, Sharon Saydah, Amy K Mottl, Dana Dabelea, Mary Helen Black, Elizabeth J Mayer-Davis, Catherine Pihoker
BACKGROUND/AIMS: In adults, lower vitamin D has been associated with increased albuminuria. This association has not been extensively studied in youth with or without type 1 diabetes. METHODS: We examined the cross-sectional association between vitamin D and albuminuria (urine albumin to creatinine ratio ≥30 mg/g) in 8,789 participants of the National Health and Nutrition Survey 2001-2006 (NHANES), who were 6-19 years old. Further, we examined the association between vitamin D and albuminuria in 938 participants from the SEARCH Nutritional Ancillary Study (SNAS), a longitudinal cohort of youth with type 1 diabetes...
May 29, 2017: Hormone Research in Pædiatrics
https://www.readbyqxmd.com/read/28545349/exploring-different-mutations-at-a-single-amino-acid-position-of-cucumber-green-mottle-mosaic-virus-replicase-to-attain-stable-symptom-attenuation
#13
Liming Liu, Bin Peng, Zhenwei Zhang, Yang Wu, Manuel Miras, Miguel A Aranda, Qinsheng Gu
Cucumber green mottle mosaic virus (CGMMV) is a member of the genus Tobamovirus (family Virgaviridae) which causes serious economic losses in cucurbit crops. A possibility for CGMMV control is the use of cross-protection, for which stable attenuated isolates are required. In this study, an infectious clone was constructed for the hn isolate of CGMMV. Unexpectedly, this clone carried a non-conserved mutation involving a single nucleotide change resulting in the replacement of Arg to Cys at residue 284 of the replicase protein; this mutation correlated with delayed symptom induction and RNA accumulation, as shown in time course experiments...
May 25, 2017: Phytopathology
https://www.readbyqxmd.com/read/28535127/modelling-virus-coinfection-to-inform-management-of-maize-lethal-necrosis-in-kenya
#14
Frank Hilker, Linda Allen, Vrushali Bokil, Cheryl Briggs, Zhilan Feng, Karen A Garrett, Louis Gross, Frédéric Hamelin, Michael J Jeger, Carrie Manore, Alison Power, Margaret Redinbaugh, Megan Rúa, Nik J Cunniffe
Maize lethal necrosis (MLN) has emerged as a serious threat to food security in sub-Saharan Africa. MLN is caused by coinfection with two viruses, maize chlorotic mottle virus (MCMV) and a potyvirus, often sugarcane mosaic virus (SCMV). To better understand dynamics of MLN and to provide insight into disease management, we model the spread of the viruses causing MLN within and between growing seasons. The model allows for transmission via vectors, soil and seeds, as well as exogenous sources of infection. Following model parameterisation, we predict how management affects disease prevalence and crop performance over multiple seasons...
May 23, 2017: Phytopathology
https://www.readbyqxmd.com/read/28527099/molecular-diversity-among-viroids-infecting-chrysanthemum-in-india
#15
C R Adkar-Purushothama, G Chennappa, K Poornachandra Rao, M Y Sreenivasa, P K Maheshwar, M N Nagendra Prasad, T Sano
Association of Chrysanthemum stunt viroid (CSVd) and Chrysanthemum chlorotic mottle viroid (CChMVd) with the Chrysanthemum plants exhibiting severe stunting, distinct yellow leaf mottling, and chlorosis was detected in the main chrysanthemum-growing regions of India. Sequence analysis of 90 cDNA clones obtained for CSVd and CChMVd, representing the chrysanthemum-growing regions of India, revealed the high degree of sequence variation throughout the genome under natural conditions. Additionally, all the analyzed CChMVd clones revealed the presence of UUUC in the tetraloop, a signature of symptomatic variants in susceptible cultivars...
May 19, 2017: Virus Genes
https://www.readbyqxmd.com/read/28526965/complete-sequence-and-genomic-annotation-of-carrot-torradovirus-1
#16
Zuriñe Rozado-Aguirre, Ian Adams, Adrian Fox, Matthew Dickinson, Neil Boonham
Carrot torradovirus 1 (CaTV1) is a new member of the genus Torradovirus within the family Secoviridae. CaTV1 genome sequences were obtained from a previous next-generation sequencing (NGS) study and were compared to other members and tentative new members of the genus. The virus has a bipartite genome, and RACE was used to amplify and sequence each end of RNA1 and RNA2. As a result, RNA1 and RNA2 are estimated to contain 6944 and 4995 nucleotides, respectively, with RNA1 encoding the proteins involved in virus replication, and RNA2 encoding the encapsidation and movement proteins...
May 19, 2017: Archives of Virology
https://www.readbyqxmd.com/read/28526964/characterization-of-a-new-isolate-of-pepper-chlorotic-spot-virus-from-yunnan-province-china
#17
Kuanyu Zheng, Tsung-Chi Chen, Shyi-Dong Yeh, Md Siddiqur Rahman, Xiaoxia Su, Kuo Wu, Ting Li, Zhongkai Zhang, Jiahong Dong
A new isolate, 14YV733, of pepper chlorotic spot virus (PCSV) from chili peppers in Yunnan province of China was identified. The typical tospoviral particles of 80-120 nm in diameter were observed by electron microscopy. The virus caused systemic symptoms in several solanaceous plants and the Brassica rapa L. Chinensis group with mechanical inoculation. The sap from infected leaves reacted positively to a rabbit antibody to the N protein of watermelon silver mottle virus (WSMoV) in immunoblotting. The S, M, and L RNAs of PCSV-14YV733 are 3310 nts, 4711 nts, and 8913 nts long, respectively...
May 19, 2017: Archives of Virology
https://www.readbyqxmd.com/read/28507553/virus-bacteria-rice-co-infection-in-africa-field-estimation-reciprocal-effects-molecular-mechanisms-and-evolutionary-implications
#18
Charlotte Tollenaere, Severine Lacombe, Issa Wonni, Mariam Barro, Cyrielle Ndougonna, Fatoumata Gnacko, Drissa Sérémé, Jonathan M Jacobs, Eugénie Hebrard, Sebastien Cunnac, Christophe Brugidou
Simultaneous infection of a single plant by various pathogen species is increasingly recognized as an important modulator of host resistance and a driver of pathogen evolution. Because plants in agro-ecosystems are the target of a multitude of pathogenic microbes, co-infection could be frequent, and consequently important to consider. This is particularly true for rapidly intensifying crops, such as rice in Africa. This study investigated potential interactions between pathogens causing two of the major rice diseases in Africa: the Rice yellow mottle virus (RYMV) and the bacterium Xanthomonas oryzae pathovar oryzicola (Xoc) in order to: 1/ document virus-bacteria co-infection in rice in the field, 2/ explore experimentally their consequences in terms of symptom development and pathogen multiplication, 3/ test the hypothesis of underlying molecular mechanisms of interactions and 4/ explore potential evolutionary consequences...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28502647/an-accurate-specific-sensitive-high-throughput-method-based-on-a-microsphere-immunoassay-for-multiplex-detection-of-three-viruses-and-bacterial-fruit-blotch-bacterium-in-cucurbits
#19
Ratthaphol Charlermroj, Manlika Makornwattana, Orawan Himananto, Channarong Seepiban, Sudtida Phuengwas, Nuchnard Warin, Oraprapai Gajanandana, Nitsara Karoonuthaisiri
To employ a microsphere immunoassay (MIA) to simultaneously detect multiple plant pathogens (potyviruses, Watermelon silver mottle virus, Melon yellow spot virus, and Acidovorax avenae subsp. citrulli) in actual plant samples, several factors need to be optimized and rigorously validated. Here, a simple extraction method using a single extraction buffer was successfully selected to detect the four pathogens in various cucurbit samples (cucumber, cantaloupe, melon, and watermelon). The extraction method and assay performance were validated with inoculated and field cucurbit samples...
May 11, 2017: Journal of Virological Methods
https://www.readbyqxmd.com/read/28499009/a-viral-suppressor-of-rna-silencing-inhibits-argonaute-1-function-by-precluding-target-rna-binding-to-pre-assembled-risc
#20
Erzsébet Kenesi, Alberto Carbonell, Rita Lózsa, Beáta Vértessy, Lóránt Lakatos
In most eukaryotes, RNA silencing is an adaptive immune system regulating key biological processes including antiviral defense. To evade this response, viruses of plants, worms and insects have evolved viral suppressors of RNA silencing proteins (VSRs). Various VSRs, such as P1 from Sweet potato mild mottle virus (SPMMV), inhibit the activity of RNA-induced silencing complexes (RISCs) including an ARGONAUTE (AGO) protein loaded with a small RNA. However, the specific mechanisms explaining this class of inhibition are unknown...
May 12, 2017: Nucleic Acids Research
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