keyword
https://read.qxmd.com/read/38648112/biological-characterization-of-physostegia-chlorotic-mottle-virus-an-emergent-virus-infecting-vegetables-in-diversified-production-systems
#1
JOURNAL ARTICLE
Coline Temple, Arnaud G Blouin, Dieke Boezen, Marleen Botermans, Laurena Durant, Kris De Jonghe, Pier de Koning, Thomas Goedefroit, Laurent Minet, Stephan Steyer, Eric Verdin, Mark Zwart, Sebastien Massart
In 2014, Physostegia chlorotic mottle virus (PhCMoV) was discovered in Austria in Physostegia virginiana. Subsequent collaborative efforts established a link between the virus and severe fruit symptoms on important crops like tomato, eggplant, and cucumber across nine European countries. Thereafter, specific knowledge gaps, which are crucial to assess the risks PhCMoV can pose for the production and how to manage it, needed to be addressed. In this study, the transmission, prevalence, and disease severity of PhCMoV were examinated...
April 22, 2024: Phytopathology
https://read.qxmd.com/read/38643446/lysinibacillus-piscis-sp-nov-isolated-from-the-gut-of-mottled-spinefoot-siganus-fuscescens
#2
JOURNAL ARTICLE
Hiyu Kanbe, Yuki Sano, Kazumori Mise, Shusei Kanie, Natsumi Ushijima, Keisuke Kawano, Minoru Kihara, Hideomi Itoh
A novel Lysinibacillus strain, designated KH24T , was isolated from the gut of Siganus fuscescens, a herbivorous fish, which was captured off the coast of Okinawa, Japan. Strain KH24T is a rod-shaped, Gram-stain-positive, spore-forming, and motile bacterium that forms off-white colonies. The 16S rRNA gene sequence of strain KH24T showed the highest similarity (97.4%) with Lysinibacillus pakistanensis JCM 18776T and L. irui IRB4-01T . Genomic similarities between strain KH24T and Lysinibacillus type strains, based on average nucleotide identity, digital DNA-DNA hybridization (genome-to-genome distance calculation), and average amino acid identity were 70...
April 21, 2024: Archives of Microbiology
https://read.qxmd.com/read/38636946/application-of-factor-analytic-and-spatial-mixed-models-for-the-analysis-of-multi-environment-trials-in-common-bean-phaseolus-vulgaris-l-in-ethiopia
#3
JOURNAL ARTICLE
Tarekegn Argaw, Brehanu Amsalu Fenta, Ermias Assefa
Common bean (Phaseolus vulgaris L.) is one of the most important grain legumes consumed globally, especially in Ethiopia, for its edible seeds, cash crops, and supply of protein for farmers. Efficient statistical methods must be employed for the evaluation of common bean varieties to accurately select superior varieties that contribute to agricultural productivity. The objective of this study was to identify promising large mottled bean varieties through analysis of multi-environment trials (MET) data using multiplicative spatial mixed models...
2024: PloS One
https://read.qxmd.com/read/38636851/a-multi-marker-assessment-of-sewage-contamination-in-streams-using-human-associated-indicator-bacteria-human-specific-viruses-and-pharmaceuticals
#4
JOURNAL ARTICLE
Peter L Lenaker, Matthew A Pronschinske, Steven R Corsi, Joel P Stokdyk, Hayley T Olds, Deborah K Dila, Sandra L McLellan
Human sewage contaminates waterways, delivering excess nutrients, pathogens, chemicals, and other toxic contaminants. Contaminants and various sewage indicators are measured to monitor and assess water quality, but these analytes vary in their representation of sewage contamination and the inferences about water quality they support. We measured the occurrence and concentration of multiple microbiological (n = 21) and chemical (n = 106) markers at two urban stream locations in Milwaukee, Wisconsin, USA over two years...
April 16, 2024: Science of the Total Environment
https://read.qxmd.com/read/38615775/site-specific-risk-based-threshold-rbt-values-for-sewage-associated-markers-in-estuarine-bathing-waters
#5
JOURNAL ARTICLE
Warish Ahmed, Mary E Schoen, Jeffrey Soller, Joanna Ciol Harrison, Kerry A Hamilton, Metasebia Gebrwold, Stuart L Simpson, Sudhi Payyappat, Michele Cassidy, Nathan Harrison, Colin Besley
This study establishes site-specific risk-based thresholds (RBTs) for sewage-associated markers, including Bacteroides HF183 (HF183), Lachnospiraceae Lachno3 (Lachno3), cross-assembly phage (CrAssphage), and pepper mild mottle virus (PMMoV), utilizing quantitative microbial risk assessment (QMRA) for recreational estuarine waters (EW). The QMRA model simulates health risks from ingestion of EW contaminated with untreated sewage. RBTs were estimated considering site-specific decay rates and concentrations of markers and pathogen (human norovirus; HNoV), aiding in the identification of high-risk days during the bathing season...
April 12, 2024: Science of the Total Environment
https://read.qxmd.com/read/38611458/adoption-of-the-2a-ribosomal-skip-principle-to-track-assembled-virions-of-pepper-mild-mottle-virus-in-nicotiana-benthamiana
#6
JOURNAL ARTICLE
Mengting Jiao, Yueyan Yin, Yanzhen Tian, Jianing Lei, Lin Lin, Jian Wu, Yuwen Lu, Hongying Zheng, Fei Yan, Jianguang Wang, Jiejun Peng
The coat protein (CP) is an important structural protein that plays many functional roles during the viral cycle. In this study, the CP of pepper mild mottle virus (PMMoV) was genetically fused to GFP using the foot-and-mouth disease virus peptide 2A linker peptide and the construct (PMMoV-GFP2A ) was shown to be infectious. The systemic spread of the virus was monitored by its fluorescence in infected plants. Electron microscopy and immunocolloidal gold labelling confirmed that PMMoV-GFP2A forms rod-shaped particles on which GFP is displayed...
March 22, 2024: Plants (Basel, Switzerland)
https://read.qxmd.com/read/38606029/a-diagnostic-dilemma-of-prevertebral-abscess-versus-food-bolus-on-lateral-neck-x-ray-a-case-report
#7
Alexander Mitropoulos, Stephen Pianko, Ronnie Ptasznik, Jacqueline Fraser
In this case, a 76-year-old female presenting with globus sensation post-oral intake demonstrated radiographical evidence of mottled radiolucency and prevertebral widening on a lateral neck X-ray at the inferior C4/cricoid cartilage, leading to concern for a prevertebral abscess. A decision was made to proceed with an urgent gastrointestinal endoscopy, and a food bolus was identified and removed, leading to a full remission of the patients' symptoms. In this case, an appropriate diagnosis was achieved by combining multiple investigations, which highlights to clinicians that taking investigations in isolation, with the aforementioned lateral neck X-ray being the primary example, could lead to potential misdiagnosis and mismanagement of patients...
April 2024: Curēus
https://read.qxmd.com/read/38605711/covid-19-trends-at-the-university-of-tennessee-predictive-insights-from-raw-sewage-sars-cov-2-detection-and-evaluation-and-pmmov-as-an-indicator-for-human-waste
#8
JOURNAL ARTICLE
Ye Li, Kurt Ash, Isablla Alamilla, Dominique Joyner, Daniel Edward Williams, Peter J McKay, Brianna Green, Sydney DeBlander, Carman North, Fadime Kara-Murdoch, Cynthia Swift, Terry C Hazen
Wastewater-based epidemiology (WBE) has become a valuable tool for monitoring the prevalence of SARS-CoV-2 on university campuses. However, concerns about effectiveness of raw sewage as a COVID-19 early warning system still exist, and it's not clear how useful normalization by simultaneous comparison of Pepper Mild Mottle Virus (PMMoV) is in addressing variations resulting from fecal discharge dilution. This study aims to contribute insights into these aspects by conducting an academic-year field trial at the student residences on the University of Tennessee, Knoxville campus, raw sewage...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38598853/first-detection-of-atractylodes-mild-mottle-virus-in-atractylodes-lancea-thunb-dc-in-hubei-province-of-china
#9
JOURNAL ARTICLE
Tingting Li, Lei Chen, Meng Wang, Xiao Huang, Lina Chen, Gonghao Duan, Yuanyuan Chen, Ling Gong, Kun Yu
The cultivated aromatic medicinal herb Atractylodes lancea (Thunb.) DC. is widely used in the pharmaceuticals, nutraceuticals, and cosmetics industries (Na-Bangchang et al. 2014; Zhan et al. 2023). Huanggang in Hubei Province is a major production area for A. lancea (Huang et al. 2022; Wang et al. 2023). In April 2023, more than two-thirds of the surveyed plant leaves in this region exhibited virus-like symptoms, such as curling and mosaic patterns. To identify the underlying cause, 80 symptomatic plant leaf samples were collected from four fields (20 leaves per field) in this region and pooled for virome analysis...
April 10, 2024: Plant Disease
https://read.qxmd.com/read/38598852/first-report-of-sweet-potato-virus-e-spve-infecting-sweet-potato-in-china
#10
JOURNAL ARTICLE
Wei Tang, ChengLing Zhang, Dongjing Yang, Jukui Ma, Jingwei Chen, Fangyuan Gao, Yiping Xie, Houjun Sun
Sweet potato (Ipomoea batatas [L.] Lam.) is a versatile crop, cultivated in the subtropical and tropical areas, as food, fodder, and industrial raw material crop. In China, sweet potato has been used as a health-care food in recent years, as it contains a wide range of nutrients and xenobiotic phytochemicals. However, viral diseases are major constraint for the sweet potato yield and quality, especially the seed production and quality. Over 30 species of viruses infect sweet potato worldwide (Clark et al. 2012)...
April 10, 2024: Plant Disease
https://read.qxmd.com/read/38598560/sars-cov-2-infects-cells-lining-the-blood-retinal-barrier-and-induces-a-hyperinflammatory-immune-response-in-the-retina-via-systemic-exposure
#11
JOURNAL ARTICLE
Monu Monu, Faraz Ahmad, Rachel M Olson, Vaishnavi Balendiran, Pawan Kumar Singh
SARS-CoV-2 has been shown to cause wide-ranging ocular abnormalities and vision impairment in COVID-19 patients. However, there is limited understanding of SARS-CoV-2 in ocular transmission, tropism, and associated pathologies. The presence of viral RNA in corneal/conjunctival tissue and tears, along with the evidence of viral entry receptors on the ocular surface, has led to speculation that the eye may serve as a potential route of SARS-CoV-2 transmission. Here, we investigated the interaction of SARS-CoV-2 with cells lining the blood-retinal barrier (BRB) and the role of the eye in its transmission and tropism...
April 10, 2024: PLoS Pathogens
https://read.qxmd.com/read/38598332/protocol-to-longitudinally-quantify-sars-cov-2-rna-in-wastewater-using-rt-qpcr-and-pepper-mild-mottle-virus-normalization
#12
JOURNAL ARTICLE
Bryan Sanchez Jimenez, Trinity Sterling, Austin Brown, Brian Modica, Kaylee Gibson, Hannah Collins, Carolyn Koch, Tyler Schwarz, Kristine N Dye
Wastewater surveillance allows severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection levels to be tracked in a community. Here, we present a protocol to longitudinally quantify SARS-CoV-2 RNA in wastewater using quantitative reverse-transcription PCR (RT-qPCR) and pepper mild mottle virus (PMMoV) normalization. We describe steps for the pasteurization of wastewater samples, solids separation, supernatant filtration, viral precipitation and concentration, and RNA extraction. We then detail procedures for RT-qPCR, viral concentration extrapolation, PMMoV normalization, and longitudinal analysis...
April 9, 2024: STAR protocols
https://read.qxmd.com/read/38587797/first-report-of-tomato-yellow-mottle-associated-virus-infecting-tobacco-in-china
#13
JOURNAL ARTICLE
Shengjun Huang, Gui Gao, Yuhang Li, Qing Mu, Sijia Zhang, Mengnan An, Yuanhua Wu, Zihao Xia, Yi Cao
Tomato yellow mottle-associated virus (TYMaV) belongs to the genus Cytorhabdovirus in the family Rhabdoviridae and has been reported to infect a variety of Solanaceae crops, such as Solanum lycopersicum, S. nigrum, Capsicum annuum and Nicotiana benthamiana (Li et al. 2022, Li et al. 2023, Xu et al. 2017, Zhou et al. 2019). In August 2022, about 500 out of 2000 tobacco (N. tabacum) plants showing leaf distortion, crinkling and mosaic symptoms were found in one tobacco growing field in Xingren City, Guizhou Province, China...
April 8, 2024: Plant Disease
https://read.qxmd.com/read/38585325/the-evolution-of-central-venous-to-arterial-carbon-dioxide-difference-pco-2-gap-during-resuscitation-affects-icu-outcomes-a-prospective-observational-study
#14
JOURNAL ARTICLE
Kapil G Zirpe, Anand M Tiwari, Atul P Kulkarni, Hrishikesh S Vaidya, Sushma K Gurav, Abhijit M Deshmukh, Prasad B Suryawanshi, Upendrakumar S Kapse, Abhaya P Bhoyar, Piyush A Dhawad, Shameek Mukherjee
INTRODUCTION: The usual methods of perfusion assessment in patients with shock, such as capillary refill time, skin mottling, and serial serum lactate measurements have many limitations. Veno-arterial difference in the partial pressure of carbon dioxide (PCO2 gap) is advocated being more reliable. We evaluated serial change in PCO2 gap during resuscitation in circulatory shock and its effect on ICU outcomes. MATERIALS AND METHODS: This prospective observational study included 110 adults with circulatory shock...
April 2024: Indian Journal of Critical Care Medicine
https://read.qxmd.com/read/38580909/skin-mottling-score-assesses-peripheral-tissue-hypoperfusion-in-critically-ill-patients-following-cardiac-surgery
#15
JOURNAL ARTICLE
Jing-Chao Luo, Ming-Hao Luo, Yi-Jie Zhang, Wen-Jun Liu, Guo-Guang Ma, Jun-Yi Hou, Ying Su, Guang-Wei Hao, Guo-Wei Tu, Zhe Luo
BACKGROUND: Skin mottling is a common manifestation of peripheral tissue hypoperfusion, and its severity can be described using the skin mottling score (SMS). This study aims to evaluate the value of the SMS in detecting peripheral tissue hypoperfusion in critically ill patients following cardiac surgery. METHODS: Critically ill patients following cardiac surgery with risk factors for tissue hypoperfusion were enrolled (n = 373). Among these overall patients, we further defined a hypotension population (n = 178) and a shock population (n = 51)...
April 5, 2024: BMC Anesthesiology
https://read.qxmd.com/read/38576642/congenital-erythropoietic-porphyria-a-rare-inherited-disorder
#16
Porika Saikrishna, Gowrishankar Palaniswamy, Navya Pillikunte Doddareddy, Lyluma Ishfaq, Mah N Zargar, Fathima Wafa Eranhikkal, Sweta Sahu
Congenital erythropoietic porphyria (CEP), also known as Gunther's disease, is an uncommon autosomal recessive disorder caused by a mutation in the uroporphyrinogen III synthase gene. This mutation results in reduced enzyme levels in heme synthesis and the accumulation of pathogenic porphyrin isomers, uroporphyrin I and coproporphyrin I, leading to the clinical manifestations of CEP. Typically, CEP manifests shortly after birth with severe cutaneous photosensitivity, blistering, ulceration, and scarring. Erythrodontia, acro-osteolysis, and skeletal abnormalities are frequently present in conjunction with it...
March 2024: Curēus
https://read.qxmd.com/read/38569737/acute-quadruple-extremity-compartment-syndrome-due-to-angio-oedema-after-polypharmacy-overdose-including-olmesartan-medoxomil-telmisartan-and-vildagliptin
#17
JOURNAL ARTICLE
Yumi Kono, Kohei Takimoto, Motoki Fujii, Yoshiro Hayashi
This case report describes a rare manifestation of acute compartment syndrome (ACS) involving all four extremities, precipitated by angio-oedema in a middle-aged woman who consumed an overdose of multiple medications: nifedipine, azelnidipine, amlodipine besylate, olmesartan medoxomil, telmisartan, esaxerenone and vildagliptin. She presented with haemodynamic instability, necessitating intubation. Despite stabilising haemodynamic parameters within 24 hours, she manifested escalating extremity oedema. At 52 hours after ingestion, mottled skin was observed, along with necrotic alterations in the swollen hands and compartment pressures exceeding 30 mm Hg in all extremities...
April 2, 2024: BMJ Case Reports
https://read.qxmd.com/read/38561999/wastewater-surveillance-of-us-coast-guard-installations-and-seagoing-military-vessels-to-mitigate-the-risk-of-covid-19-outbreaks-march-2021-august-2022
#18
JOURNAL ARTICLE
Gregory J Hall, Eric J Page, Min Rhee, Clara Hay, Amelia Krause, Emma Langenbacher, Allison Ruth, Steve Grenier, Alexander P Duran, Ibrahim Kamara, John K Iskander, Fahad Alsayyid, Dana L Thomas, Edward Bock, Nicholas Porta, Jessica Pharo, Beth A Osterink, Sharon Zelmanowitz, Corinna M Fleischmann, Dilhara Liyanage, Joshua P Gray
OBJECTIVES: Military training centers and seagoing vessels are often environments at high risk for the spread of COVID-19 and other contagious diseases, because military trainees and personnel arrive after traveling from many parts of the country and live in congregate settings. We examined whether levels of SARS-CoV-2 genetic material in wastewater correlated with SARS-CoV-2 infections among military personnel living in communal barracks and vessels at US Coast Guard training centers in the United States...
April 1, 2024: Public Health Reports
https://read.qxmd.com/read/38557872/capsicum-chinense-jacq-derived-glutaredoxin-ccgrxs12-alters-redox-status-of-the-cells-to-confer-resistance-against-pepper-mild-mottle-virus-pmmov-i
#19
JOURNAL ARTICLE
R M Saravana Kumar, S V Ramesh, Z Sun, Sugitha Thankappan, Naga Prafulla Chandrika Nulu, Asish Kanakaraj Binodh, Sundaravelpandian Kalaipandian, Ramachandran Srinivasan
The CcGRXS12 gene protects plants from cellular oxidative damage that are caused by both biotic and abiotic stresses. The protein possesses GSH-disulphide oxidoreductase property but lacks Fe-S cluster assembly mechanism. Glutaredoxins (Grxs) are small, ubiquitous and multi-functional proteins. They are present in different compartments of plant cells. A chloroplast targeted Class I GRX (CcGRXS12) gene was isolated from Capsicum chinense during the pepper mild mottle virus (PMMoV) infection. Functional characterization of the gene was performed in Nicotiana benthamiana transgenic plants transformed with native C...
April 1, 2024: Plant Cell Reports
https://read.qxmd.com/read/38537489/urban-wastewater-based-epidemiology-for-multi-viral-pathogen-surveillance-in-the-valencian-region-spain
#20
JOURNAL ARTICLE
Inés Girón-Guzmán, Enric Cuevas-Ferrando, Regino Barranquero, Azahara Díaz-Reolid, Pablo Puchades-Colera, Irene Falcó, Alba Pérez-Cataluña, Gloria Sánchez
Wastewater-based epidemiology (WBE) has lately arised as a promising tool for monitoring and tracking viral pathogens in communities. In this study, we analysed WBE's role as a multi-pathogen surveillance strategy to detect the presence of several viral illness causative agents. Thus, an epidemiological study was conducted from October 2021 to February 2023 to estimate the weekly levels of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Respiratory Syncytial virus (RSV), and Influenza A virus (IAV) in influent wastewater samples (n = 69)...
March 16, 2024: Water Research
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