keyword
https://read.qxmd.com/read/38702350/feasibility-safety-efficacy-and-potential-scaling-up-of-sofosbuvir-based-hcv-treatment-in-central-and-west-africa-tac-anrs-12311-trial
#21
MULTICENTER STUDY
Karine Lacombe, Raoul Moh, Corine Chazallon, Maud Lemoine, Babacar Sylla, Fatoumata Fadiga, Jerôme Le Carrou, Fabienne Marcellin, Charles Kouanfack, Laura Ciaffi, Michelle Tagni Sartre, Magloire Biwole Sida, Alpha Diallo, Joel Gozlan, Moussa Seydi, Viviane Cissé, Christine Danel, Pierre Marie Girard, Thomas d'Aquin Toni, Albert Minga, Sylvie Boyer, Patrizia Carrieri, Alain Attia
Access to Hepatis C treatment in Sub-Saharan Africa is a clinical, public health and ethical concern. The multi-country open-label trial TAC ANRS 12311 allowed assessing the feasibility, safety, efficacy of a specific care model of HCV treatment and retreatment in patients with hepatitis C in Sub Saharan Africa. Between November 2015 and March 2017, with follow-up until mid 2019, treatment-naïve patients with HCV without decompensated cirrhosis or liver cancer were recruited to receive 12 week-treatment with either sofosbuvir + ribavirin (HCV genotype 2) or sofosbuvir + ledipasvir (genotype 1 or 4) and retreatment with sofosbuvir + velpatasvir + voxilaprevir in case of virological failure...
May 3, 2024: Scientific Reports
https://read.qxmd.com/read/38701233/longitudinal-fluctuations-in-protein-concentrations-and-higher-order-structures-in-the-plasma-proteome-of-kidney-failure-patients-subjected-to-a-kidney-transplant
#22
JOURNAL ARTICLE
Sofia Kalaidopoulou Nteak, Franziska Völlmy, Marie V Lukassen, Henk van den Toorn, Maurits A den Boer, Albert Bondt, Sjors P A van der Lans, Pieter-Jan Haas, Arjan D van Zuilen, Suzan H M Rooijakkers, Albert J R Heck
Using proteomics and complexome profiling, we evaluated in a year-long study longitudinal variations in the plasma proteome of kidney failure patients, prior to and after a kidney transplantation. The post-transplant period was complicated by bacterial infections, resulting in dramatic changes in the proteome, attributed to an acute phase response (APR). As positive acute phase proteins (APPs), being elevated upon inflammation, we observed the well-described C-reactive protein and Serum Amyloid A (SAA), but also Fibrinogen, Haptoglobin, Leucine-rich alpha-2-glycoprotein, Lipopolysaccharide-binding protein, Alpha-1-antitrypsin, Alpha-1-antichymotrypsin, S100, and CD14...
May 3, 2024: Journal of Proteome Research
https://read.qxmd.com/read/38700735/new-generation-biofilm-effective-antimicrobial-peptides-and-a-real-time-anti-biofilm-activity-assay-comic
#23
JOURNAL ARTICLE
Tuba Polat, İrem Soyhan, Sinan Cebeci, Tuğba Arzu Özal İldeniz, Özgül Gök, Merve Açıkel Elmas, Erkan Mozioğlu, Nihan Ünübol
Nowadays, it is very important to produce new-generation drugs with antimicrobial properties that will target biofilm-induced infections. The first target for combating these microorganisms, which are the source itself. Antimicrobial peptides, which are more effective than antibiotics due to their ability to kill microorganisms and use a different metabolic pathway, are among the new options today. The aim of this study is to develop new-generation antibiotics that inhibit both biofilm-producing bacteria and the biofilm itself...
May 3, 2024: Applied Microbiology and Biotechnology
https://read.qxmd.com/read/38700435/influence-of-milk-pasteurization-on-the-key-aroma-compounds-in-a-30-weeks-ripened-pilot-scale-gouda-cheese-elucidated-by-the-sensomics-approach
#24
JOURNAL ARTICLE
Philipp W Duensing, Jörg Hinrichs, Peter Schieberle
Gouda cheese was produced from pasteurized milk and ripened for 30 weeks (PM-G). By application of gas chromatography/olfactometry and an aroma extract dilution analysis on the volatiles isolated by extraction/SAFE distillation, 25 odor-active compounds in the flavor dilution (FD) factor range from 16 to 4096 were identified. Butanoic acid, 2- and 3-methylbutanoic acid, and acetic acid showed the highest FD factors, and 2-phenylethanol, δ-decalactone, and δ-dodecalactone were most odor-active in the neutral-basic fraction...
May 3, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38700300/a-prospective-observational-study-of-autoimmune-encephalitis-in-northwestern-india
#25
JOURNAL ARTICLE
Bhawna Sharma, Madhuparna Paul, Amit K Bagaria
OBJECTIVES: Autoimmune encephalitis (AIE) is a group of rare, increasingly recognized, potentially reversible, noninfectious causes of unexplained encephalitis. It affects any age-group and has a plethora of clinical presentations, the most common being the neuropsychiatric manifestation. The diagnosis of this entity at the right time and proper treatment with immunotherapy can save many lives. In this study, we describe the demographic profile, clinical spectrum, diagnosis, and treatment of 42 patients with features of AIE...
September 2023: Journal of the Association of Physicians of India
https://read.qxmd.com/read/38699886/formation-of-key-aroma-compounds-during-30-weeks-of-ripening-in-gouda-type-cheese-produced-from-pasteurized-and-raw-milk
#26
JOURNAL ARTICLE
Philipp W Duensing, Jörg Hinrichs, Peter Schieberle
Gouda-type cheeses were produced on a pilot-scale from raw milk (RM-G) and pasteurized milk (PM-G). Sixteen key aroma compounds previously characterized by the sensomics approach were quantitated in the unripened cheeses and at five different ripening stages (4, 7, 11, 19, and 30 weeks) by means of stable isotope dilution assays. Different trends were observed in the formation of the key aroma compounds. Short-chain free fatty acids and ethyl butanoate as well as ethyl hexanoate continuously increased during ripening but to a greater extent in RM-G...
May 3, 2024: Journal of Agricultural and Food Chemistry
https://read.qxmd.com/read/38699879/crystal-structure-of-human-cep57-c-terminal-domain-reveals-the-presence-of-leucine-zipper-and-the-potential-microtubule-binding-region
#27
JOURNAL ARTICLE
Sanskrita Sukla, Dhayanitha Ranganathan Dhakshinamoorthy, Arvind V Ramesh, Scott Lew, Min Su, Jayaraman Seetharaman
Cep57, a vital centrosome-associated protein, recruits essential regulatory enzymes for centriole duplication. Its dysfunction leads to anomalies, including reduced centrioles and mosaic-variegated aneuploidy syndrome. Despite functional investigations, understanding structural aspects and their correlation with functions is partial till date. We present the structure of human Cep57 C-terminal microtubule binding (MT-BD) domain, revealing conserved motifs ensuring functional preservation across evolution. A leucine zipper, with an adjacent possible microtubule-binding region, potentially forms a stabilizing scaffold for microtubule nucleation-accommodating pulling and tension from growing microtubules...
May 3, 2024: Proteins
https://read.qxmd.com/read/38699852/lgi1-antibody-encephalitis-how-to-approach-this-highly-treatable-dementia-mimic-in-memory-and-mental-health-services
#28
REVIEW
Sophie N M Binks, Adam Al-Diwani, Adam E Handel, Tomasz Bajorek, Sanjay Manohar, Masud Husain, Sarosh R Irani, Ivan Koychev
Leucine-rich glioma-inactivated 1-antibody-encephalitis is a treatable and potentially reversible cause of cognitive and psychiatric presentations, and may mimic cognitive decline, rapidly progressive dementia and complex psychosis in older patients. This aetiology is of immediate relevance given the alternative treatment pathway required, compared with other conditions presenting with cognitive deficits.
May 3, 2024: British Journal of Psychiatry
https://read.qxmd.com/read/38698410/two-remarkable-serine-leucine-polymorphisms-in-helicobacter-pylori-functional-importance-for-serine-protease-htra-and-adhesin-baba
#29
REVIEW
Steffen Backert, Nicole Tegtmeyer, Anselm H C Horn, Heinrich Sticht, Bodo Linz
Single nucleotide polymorphisms (SNPs) account for significant genomic variability in microbes, including the highly diverse gastric pathogen Helicobacter pylori. However, data on the effects of specific SNPs in pathogen-host interactions are scarce. Recent functional studies unravelled how a serine/leucine polymorphism in serine protease HtrA affects the formation of proteolytically active trimers and modulates cleavage of host cell-to-cell junction proteins during infection. A similar serine/leucine mutation in the carbohydrate binding domain of the adhesin BabA controls binding of ABO blood group antigens, enabling binding of either only the short Lewis b/H antigens of blood group O or also the larger antigens of blood groups A and B...
May 2, 2024: Cell Communication and Signaling: CCS
https://read.qxmd.com/read/38698267/co-expression-network-analysis-and-identification-of-core-genes-in-the-interaction-between-wheat-and-puccinia-striiformis-f-sp-tritici
#30
JOURNAL ARTICLE
Yibo Wang, Ke Zhang, Dan Chen, Kai Liu, Wei Chen, Fei He, Zhijun Tong, Qiaoling Luo
The epidemic of stripe rust, caused by the pathogen Puccinia striiformis f. sp. tritici (Pst), would reduce wheat (Triticum aestivum) yields seriously. Traditional experimental methods are difficult to discover the interaction between wheat and Pst. Multi-omics data analysis provides a new idea for efficiently mining the interactions between host and pathogen. We used 140 wheat-Pst RNA-Seq data to screen for differentially expressed genes (DEGs) between low susceptibility and high susceptibility samples, and carried out Gene Ontology (GO) enrichment analysis...
May 2, 2024: Archives of Microbiology
https://read.qxmd.com/read/38697422/targeting-leucine-rich-ppr-motif-containing-protein-lrpprc-by-5-7-4-trimethoxyflavone-suppresses-esophageal-squamous-cell-carcinoma-progression
#31
JOURNAL ARTICLE
Hui Liu, Yubing Zhou, Mangaladoss Fredimoses, Peijia Niu, Yunxiao Ge, Rui Wu, Tingting Liu, Pan Li, Yang Shi, Yaqian Shi, Kangdong Liu, Zigang Dong
JAK2/STAT3/MYC axis is dysregulated in nearly 70 % of human cancers, but targeting this pathway therapeutically remains a big challenge in cancer therapy. In this study, genes associated with JAK2, STAT3, and MYC were analyzed, and potential target genes were selected. Leucine-rich PPR motif-containing protein (LRPPRC) whose function and regulation are not fully understood, emerged as one of top 3 genes in terms of RNA epigenetic modification. Here, we demonstrate LRPPRC may be an independent prognostic indicator besides JAK2, STAT3, and MYC...
April 30, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38697251/cxcl1-ighg1-signaling-enhances-crosstalk-between-tumor-cells-and-tumor-associated-macrophages-to-promote-mc-lr-induced-colorectal-cancer-progression
#32
JOURNAL ARTICLE
Lingqiao Wang, Weiyan Chen, Huidong Jin, Yao Tan, Chengwei Guo, Wenjuan Fu, Zhiling Wu, Ke Cui, Yiqi Wang, Zhiqun Qiu, Guowei Zhang, Wenbin Liu, Ziyuan Zhou
Microcystin-leucine arginine (MC-LR) is a common cyantotoxin produced by hazardous cyanobacterial blooms, and eutrophication is increasing the contamination level of MC-LR in drinking water supplies and aquatic foods. MC-LR has been linked to colorectal cancer (CRC) progression associated with tumor microenvironment, however, the underlying mechanism is not clearly understood. In present study, by using GEO, KEGG, GESA and ImmPort database, MC-LR related differentially expressed genes (DEGs) and pathway- and gene set- enrichment analysis were performed...
April 30, 2024: Environmental Pollution
https://read.qxmd.com/read/38696238/androgen-synthesis-cell-specific-crebzf-deficiency-alters-adrenal-cortex-steroid-secretion-and-develops-behavioral-abnormalities-in-adult-male-mice
#33
JOURNAL ARTICLE
Hongyu Niu, Chao Li, Hexin Zhang, Haokun Liu, Chunmei Shang, Yanni Jia, Wuenjiya, Zuhui Li, Aihua Wang, Yaping Jin, Pengfei Lin
The global challenge of male infertility is escalating, notably due to the decreased testosterone (T) synthesis in testicular Leydig cells under stress, underscoring the critical need for a more profound understanding of its regulatory mechanisms. CREBZF, a novel basic region-leucine zipper transcription factor, regulates testosterone synthesis in mouse Leydig cells in vitro; however, further validation through in vivo experiments is essential. Our study utilized Cyp17a1-Cre to knock out CREBZF in androgen-synthesis cells and explored the physiological roles of CREBZF in fertility, steroid hormone synthesis, and behaviors in adult male mice...
May 15, 2024: FASEB Journal: Official Publication of the Federation of American Societies for Experimental Biology
https://read.qxmd.com/read/38695677/powdery-mildew-effectors-avr-a1-and-bec1016-target-the-er-j-domain-protein-hverdj3b-required-for-immunity-in-barley
#34
JOURNAL ARTICLE
Zizhang Li, Valeria Velásquez-Zapata, J Mitch Elmore, Xuan Li, Wenjun Xie, Sohini Deb, Xiao Tian, Sagnik Banerjee, Hans J L Jørgensen, Carsten Pedersen, Roger P Wise, Hans Thordal-Christensen
The barley powdery mildew fungus, Blumeria hordei (Bh), secretes hundreds of candidate secreted effector proteins (CSEPs) to facilitate pathogen infection and colonization. One of these, CSEP0008, is directly recognized by the barley nucleotide-binding leucine-rich-repeat (NLR) receptor MLA1 and therefore is designated AVRA1 . Here, we show that AVRA1 and the sequence-unrelated Bh effector BEC1016 (CSEP0491) suppress immunity in barley. We used yeast two-hybrid next-generation interaction screens (Y2H-NGIS), followed by binary Y2H and in planta protein-protein interactions studies, and identified a common barley target of AVRA1 and BEC1016, the endoplasmic reticulum (ER)-localized J-domain protein HvERdj3B...
May 2024: Molecular Plant Pathology
https://read.qxmd.com/read/38695653/a-vicinal-oxygen-chelate-protein-facilitates-viral-infection-by-triggering-the-unfolded-protein-response-in-nicotiana-benthamiana
#35
JOURNAL ARTICLE
Zhihong Guo, Ning Jiang, Menglin Li, Hongfang Guo, Qi Liu, Xinyu Qin, Zongying Zhang, Chenggui Han, Ying Wang
Vicinal oxygen chelate (VOC) proteins are members of an enzyme superfamily with dioxygenase or non-dioxygenase activities. However, the biological functions of VOC proteins in plants are poorly understood. Here, we show that a VOC in Nicotiana benthamiana (NbVOC1) facilitates viral infection. NbVOC1 was significantly induced by infection by beet necrotic yellow vein virus (BNYVV). Transient overexpression of NbVOC1 or its homolog from Beta vulgaris (BvVOC1) enhanced BNYVV infection in N. benthamiana, which required the nuclear localization of VOC1...
May 2, 2024: Journal of Integrative Plant Biology
https://read.qxmd.com/read/38695543/prussian-blue-analogues-derived-molecularly-imprinted-nanozyme-array-for-septicemia-detection
#36
JOURNAL ARTICLE
Kheibar Dashtian, Fatemeh Afshar Gheshlaghi, Rouholah Zare-Dorabei, Mohammad Mahdavi
Septicemia, a severe bacterial infection, poses significant risks to human health. Early detection of septicemia by tracking specific biomarkers is crucial for a timely intervention. Herein, we developed a molecularly imprinted (MI) TiO2 -Fe-CeO2 nanozyme array derived from Ce[Fe(CN)6 ] Prussian blue analogues (PBA), specifically targeting valine, leucine, and isoleucine, as potential indicators of septicemia. The synthesized nanozyme arrays were thoroughly characterized using various analytical techniques, including Fourier transform infrared spectroscopy, X-ray diffraction, field-emission scanning electron microscope, and energy-dispersive X-ray...
May 2, 2024: ACS Applied Bio Materials
https://read.qxmd.com/read/38695485/unpaired-cysteine-insertions-favor-transmembrane-dimerization-and-induce-ligand-independent-constitutive-cytokine-receptor-signaling
#37
JOURNAL ARTICLE
Lynn Affrica Felicitas Baumgärtner, Julia Ettich, Helene Balles, Dorothee Johanna Lapp, Sofie Mossner, Christin Bassenge, Meryem Ouzin, Helmut Hanenberg, Jürgen Scheller, Doreen Manuela Floss
Naturally occurring gain-of-function (GOF) mutants have been identified in patients for a variety of cytokine receptors. Although this constitutive activation of cytokine receptors is strongly associated with malignant disorders, ligand-independent receptor activation is also a useful tool in synthetic biology e.g. to improve adoptive cellular therapies with genetically modified T-cells. Balanced Interleukin (IL-)7 signaling via a heterodimer of IL-7 receptor (IL-7Rα) and the common γ-chain (γc) controls T- and B-cell development and expansion, whereas uncontrolled IL-7 signaling can drive acute lymphoid leukemia (ALL) development...
May 3, 2024: Biological Chemistry
https://read.qxmd.com/read/38694919/investigation-of-the-shared-biological-mechanisms-and-common-biomarker-aptaf1-of-sleep-deprivation-and-mild-cognitive-impairment-using-integrated-bioinformatics-analysis
#38
JOURNAL ARTICLE
Xiaolan Liu, Baili Lu, Hui Huang
Introduction: The relationship between sleep loss and cognitive impairment has long been widely recognized, but there is still a lack of complete understanding of the underlying mechanisms and potential biomarkers. The purpose of this study is to further explore the shared biological mechanisms and common biomarkers between sleep loss and cognitive impairment. Methods: The mitochondria-related genes and gene expression data were downloaded from the MitoCarta3.0 and Gene Expression Omnibus (GEO) databases. We identified the differentially expressed mitochondrial-related genes by combing the differentially expressed genes (DEGs) in sleep deprivation (SD) and mild cognitive impairment (MCI) datasets with mitochondria-related gene lists...
2024: Frontiers in Pharmacology
https://read.qxmd.com/read/38694804/indirect-influence-of-soil-enzymes-and-their-stoichiometry-on-soil-organic-carbon-response-to-warming-and-nitrogen-deposition-in-the-tibetan-plateau-alpine-meadow
#39
JOURNAL ARTICLE
Xiang Xuemei, De Kejia, Lin Weishan, Feng Tingxu, Li Fei, Wei Xijie
Despite extensive research on the impact of warming and nitrogen deposition on soil organic carbon components, the response mechanisms of microbial community composition and enzyme activity to soil organic carbon remain poorly understood. This study investigated the effects of warming and nitrogen deposition on soil organic carbon components in the Tibetan Plateau alpine meadow and elucidated the regulatory mechanisms of microbial characteristics, including soil microbial community, enzyme activity, and stoichiometry, on organic carbon components...
2024: Frontiers in Microbiology
https://read.qxmd.com/read/38694013/the-effects-of-resistance-exercise-and-leucine-enriched-essential-amino-acid-supplementation-on-muscle-mass-and-physical-function-in-post-gastrectomy-patients-a-pilot-randomized-controlled-trial
#40
JOURNAL ARTICLE
Atsushi Sawada, Kentaro Yoneta, Eri Togashi, Shogo Asaka, Riho Tada, Takaaki Asada, Seiichi Son, Makoto Tayama, Masami Kimura, Satoshi Fujita
[Purpose] In gastric cancer patients, low muscle mass decreases overall survival and quality of life (QOL). Resistance exercise with leucine-enriched essential amino acid (LEAA) supplementation may prevent muscle mass loss. This study was aimed at determining whether resistance exercise with LEAA supplementation prevents muscle mass loss in post-gastrectomy patients. [Participant and Methods] We conducted a single-center, open-label, randomized controlled pilot trial. Ten participants who underwent gastrectomy were divided into two groups...
May 2024: Journal of Physical Therapy Science
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