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https://www.readbyqxmd.com/read/28930088/comparison-of-pcr-methods-for-the-detection-of-genetic-variants-of-carp-edema-virus
#1
Mikolaj Adamek, Marek Matras, Verena Jung-Schroers, Felix Teitge, Max Heling, Sven M Bergmann, Michal Reichert, Keith Way, David M Stone, Dieter Steinhagen
The infection of common carp and its ornamental variety, koi, with the carp edema virus (CEV) is often associated with the occurrence of a clinical disease called 'koi sleepy disease'. The disease may lead to high mortality in both koi and common carp populations. To prevent further spread of the infection and the disease, a reliable detection method for this virus is required. However, the high genetic variability of the CEV p4a gene used for PCR-based diagnostics could be a serious obstacle for successful and reliable detection of virus infection in field samples...
September 20, 2017: Diseases of Aquatic Organisms
https://www.readbyqxmd.com/read/28929206/adaptive-management-of-environmental-flows-using-irrigation-infrastructure-to-deliver-environmental-benefits-during-a-large-hypoxic-blackwater-event-in-the-southern-murray-darling-basin-australia
#2
Robyn J Watts, R Keller Kopf, Nicole McCasker, Julia A Howitt, John Conallin, Ian Wooden, Lee Baumgartner
Widespread flooding in south-eastern Australia in 2010 resulted in a hypoxic (low dissolved oxygen, DO) blackwater (high dissolved carbon) event affecting 1800 kilometres of the Murray-Darling Basin. There was concern that prolonged low DO would result in death of aquatic biota. Australian federal and state governments and local stakeholders collaborated to create refuge areas by releasing water with higher DO from irrigation canals via regulating structures (known as 'irrigation canal escapes') into rivers in the Edward-Wakool system...
September 19, 2017: Environmental Management
https://www.readbyqxmd.com/read/28929028/fish-ontology-framework-for-taxonomy-based-fish-recognition
#3
Najib M Ali, Haris A Khan, Amy Y-Hui Then, Chong Ving Ching, Manas Gaur, Sarinder Kaur Dhillon
Life science ontologies play an important role in Semantic Web. Given the diversity in fish species and the associated wealth of information, it is imperative to develop an ontology capable of linking and integrating this information in an automated fashion. As such, we introduce the Fish Ontology (FO), an automated classification architecture of existing fish taxa which provides taxonomic information on unknown fish based on metadata restrictions. It is designed to support knowledge discovery, provide semantic annotation of fish and fisheries resources, data integration, and information retrieval...
2017: PeerJ
https://www.readbyqxmd.com/read/28929016/age-growth-mortality-and-reproductive-seasonality-of-jolthead-porgy-calamus-bajonado-from-florida-waters
#4
Michael L Burton, Jennifer C Potts, Jordan Page, Ariel Poholek
Ages of jolthead porgy (Calamus bajonado Schneider 1801) (n = 635) from Florida commercial and recreational fisheries from 2008-2016 were determined using sectioned sagittal otoliths. We determined, using edge-type analysis, that opaque zones were annular, forming March-June (peaking in April). Jolthead porgy ranged from 1-13 years, and the largest fish measured 680 mm TL (total length, mm). Body size relationships for jolthead porgy were TL = 1.09FL + 20.44 (n = 622, r(2) = 0.99), FL = 0.90 TL -14...
2017: PeerJ
https://www.readbyqxmd.com/read/28928974/the-influence-of-water-temperature-on-sockeye-salmon-heart-rate-recovery-following-simulated-fisheries-interactions
#5
Tanya S Prystay, Erika J Eliason, Michael J Lawrence, Melissa Dick, Jacob W Brownscombe, David A Patterson, Glenn T Crossin, Scott G Hinch, Steven J Cooke
Selective harvest policies have been implemented in North America to enhance the conservation of Pacific salmon (Oncorhynchus spp.) stocks, which has led to an increase in the capture and release of fish by all fishing sectors. Despite the immediate survival benefits, catch-and-release results in capture stress, particularly at high water temperatures, and this can result in delayed post-release mortality minutes to days later. The objective of this study was to evaluate how different water temperatures influenced heart rate disturbance and recovery of wild sockeye salmon (Oncorhynchus nerka) following fisheries interactions (i...
2017: Conservation Physiology
https://www.readbyqxmd.com/read/28928522/microbial-analysis-of-meatballs-cooled-with-vacuum-and-conventional-cooling
#6
Hande Mutlu Ozturk, Harun Kemal Ozturk, Gunnur Koçar
Vacuum cooling is a rapid evaporative cooling technique and can be used for pre-cooling of leafy vegetables, mushroom, bakery, fishery, sauces, cooked food, meat and particulate foods. The aim of this study was to apply the vacuum cooling and the conventional cooling techniques for the cooling of the meatball and to show the vacuum pressure effect on the cooling time, the temperature decrease and microbial growth rate. The results of the vacuum cooling and the conventional cooling (cooling in the refrigerator) were compared with each other for different temperatures...
August 2017: Journal of Food Science and Technology
https://www.readbyqxmd.com/read/28926810/revisiting-the-biogeochemistry-of-arsenic-in-the-baltic-sea-impact-of-anthropogenic-activity
#7
Lei Li, Christa Pohl, Jing-Ling Ren, Detlef Schulz-Bull, Xiu-Hong Cao, Günther Nausch, Jing Zhang
With the increase in anthropogenic environmental disruption, the behavior of arsenic in the Baltic Sea has received more scientific attention because of its complex forms and toxicity, and was re-visited to determine if there have been measurable changes recently. A cruise was conducted in 10-19 May 2011 to investigate the species and distribution of total dissolved inorganic arsenic (TDIAs: [TDIAs]=[As(V)]+[As(III)]) revealing links between the hydrographic dynamics and biological/chemical reactions in the Baltic Sea...
September 16, 2017: Science of the Total Environment
https://www.readbyqxmd.com/read/28926627/tiger-sharks-can-connect-equatorial-habitats-and-fisheries-across-the-atlantic-ocean-basin
#8
André S Afonso, Ricardo Garla, Fábio H V Hazin
Increasing our knowledge about the spatial ecology of apex predators and their interactions with diverse habitats and fisheries is necessary for understanding the trophic mechanisms that underlie several aspects of marine ecosystem dynamics and for guiding informed management policies. A preliminary assessment of tiger shark (Galeocerdo cuvier) population structure off the oceanic insular system of Fernando de Noronha (FEN) and the large-scale movements performed by this species in the equatorial Atlantic Ocean was conducted using longline and handline fishing gear and satellite telemetry...
2017: PloS One
https://www.readbyqxmd.com/read/28925076/using-the-robust-design-framework-and-relative-abundance-to-predict-the-population-size-of-pallid-sturgeon-scaphirhynchus-albus-in-the-lower-missouri-river
#9
K D Steffensen, L A Powell, M A Pegg
Several population viability models were constructed to aid recovery in endangered Scaphirhynchus albus, but these models are dependent upon accurate and precise input parameters that are not provided with standard catch per unit effort (CPUE) indices. Nine years of sampling efforts, under the robust design framework, provided 1223 unique captures with an 18·3% recapture rate. The annual population estimates varied from 4·0-7·3 fish rkm(-1) for wild and 8·4-18·4 fish rkm(-1) for hatchery-reared S...
September 18, 2017: Journal of Fish Biology
https://www.readbyqxmd.com/read/28923938/benefits-and-risks-of-diversification-for-individual-fishers
#10
Sean C Anderson, Eric J Ward, Andrew O Shelton, Milo D Adkison, Anne H Beaudreau, Richard E Brenner, Alan C Haynie, Jennifer C Shriver, Jordan T Watson, Benjamin C Williams
Individuals relying on natural resource extraction for their livelihood face high income variability driven by a mix of environmental, biological, management, and economic factors. Key to managing these industries is identifying how regulatory actions and individual behavior affect income variability, financial risk, and, by extension, the economic stability and the sustainable use of natural resources. In commercial fisheries, communities and vessels fishing a greater diversity of species have less revenue variability than those fishing fewer species...
September 18, 2017: Proceedings of the National Academy of Sciences of the United States of America
https://www.readbyqxmd.com/read/28923779/selenium-nanoparticles-enhanced-thermal-tolerance-and-maintain-cellular-stress-protection-of-pangasius-hypophthalmus-reared-under-lead-and-high-temperature
#11
Neeraj Kumar, K K Krishnani, Sanjay Kumar Gupta, Narendra Pratap Singh
There is strong relation between nutrition and thermal tolerance of fish in terms of improved critical temperature minima (CTmin), lethal temperature minima (LTmin), critical temperature maxima (CTmax), and lethal temperature maxima (LTmax). Fishes act as quantifying indicators to the climate change due to their critical thermal limits in nature and ability to adjust thermal sensitivity to maintain their homeostasis. In the present study, biologically synthesised selenium nanoparticles (Se-NPs) from fisheries waste (fish gill) was used to evaluate its efficacy for enhancement of thermal tolerance of Pangasius hypophthalmus reared under lead (Pb) and high temperature (34°C) for 72 days...
September 15, 2017: Respiratory Physiology & Neurobiology
https://www.readbyqxmd.com/read/28923579/early-steps-for-successful-management-in-small-scale-fisheries-an-analysis-of-fishers-managers-and-scientists-opinions-preceding-implementation
#12
Sieglind Wallner-Hahn, Maricela de la Torre-Castro
This study analyzes fishers', managers' and scientists' opinions on management measures to facilitate the initiation of management processes towards more sustainable small-scale seagrass fisheries in Zanzibar, Tanzania. The results show that most fishers and managers agreed on the need to include seagrasses specifically in future management. There was further agreement on dragnets being the most destructive gears, and the use of dragnets being a major threat to local seagrass ecosystems. Gear restrictions excluding illegal dragnets were the favored management measure among fishers...
September 15, 2017: Marine Pollution Bulletin
https://www.readbyqxmd.com/read/28923557/a-molecular-approach-towards-taxonomic-identification-of-elasmobranch-species-from-maltese-fisheries-landings
#13
Adriana Vella, Noel Vella, Sarah Schembri
The mitochondrial genome, through the application of DNA barcoding, provides a powerful tool for identifying species even when specimens are either incomplete or belong to species that exhibit cryptic diversity. In fisheries management accurate identification of whole or part of the specimens landed is a fundamental requirement for the conservation of species affected directly or indirectly by the fisheries activities. In this study cytochrome c oxidase subunit I (COI) and NADH dehydrogenase subunit 2 (ND2) sequences were used to genetically distinguish 36 elasmobranch species collected from Maltese (Central Mediterranean) commercial fisheries landings...
September 8, 2017: Marine Genomics
https://www.readbyqxmd.com/read/28918278/heavy-metals-as-hg-and-v-and-stable-isotope-ratios-%C3%AE-13-c-and-%C3%AE-15-n-in-fish-from-yellow-river-estuary-china
#14
Yuan Liu, Guijian Liu, Zijiao Yuan, Houqi Liu, Paul K S Lam
The Yellow River Estuary is a significant fishery, but at present there are few studies about the concentrations of arsenic (As), mercury (Hg) and vanadium (V) in fish from this area, which might cause potential health risk to fish consumers. The aim of this study was to research on the accumulation and potential sources of heavy metals in the fish of the Yellow River Estuary. Arsenic, Hg, V and stable isotope ratios (δ(15)N and δ(13)C) in 11 species of 129 fish were analyzed. Results showed that the concentrations of As and Hg were all lower than the guideline levels established by international organizations and legal limits by several countries...
September 14, 2017: Science of the Total Environment
https://www.readbyqxmd.com/read/28915947/immunosensor-array-platforms-based-on-self-assembled-dithiols-for-the-electrochemical-detection-of-tetrodotoxins-in-puffer-fish
#15
Laia Reverté, Katrina Campbell, Maria Rambla-Alegre, Christopher T Elliott, Jorge Diogène, Mònica Campàs
The recent detection of tetrodotoxins (TTXs) in European fish and shellfish has emphasized the urgent need to develop specific, selective, rapid and easy-to-use methods for their detection to assess the potential risk posed to human health. For this purpose, a dithiol self-assembled monolayer (SAM)-based immunoassay previously performed on maleimide plates (mELISA) has been adapted to gold electrode arrays for the development of an electrochemical immunosensor for TTX. The electrochemical SAM-based immunosensor designed herein, provided an oriented, stable and spaced sensing platform for the determination of TTX, attaining a limit of detection of 2...
October 9, 2017: Analytica Chimica Acta
https://www.readbyqxmd.com/read/28915548/a-spatio-temporal-statistical-model-of-maximum-daily-river-temperatures-to-inform-the-management-of-scotland-s-atlantic-salmon-rivers-under-climate-change
#16
Faye L Jackson, Robert J Fryer, David M Hannah, Colin P Millar, Iain A Malcolm
The thermal suitability of riverine habitats for cold water adapted species may be reduced under climate change. Riparian tree planting is a practical climate change mitigation measure, but it is often unclear where to focus effort for maximum benefit. Recent developments in data collection, monitoring and statistical methods have facilitated the development of increasingly sophisticated river temperature models capable of predicting spatial variability at large scales appropriate to management. In parallel, improvements in temporal river temperature models have increased the accuracy of temperature predictions at individual sites...
September 14, 2017: Science of the Total Environment
https://www.readbyqxmd.com/read/28915475/survival-of-european-plaice-discarded-from-coastal-otter-trawl-fisheries-in-the-english-channel
#17
Marie Morfin, Dorothée Kopp, Hugues P Benoît, Sonia Méhault, Peter Randall, Robert Foster, Thomas Catchpole
Species that have a high likelihood of surviving the discarding process have become great concern since the European Union reformed the Common Fisheries Policy and enacted a landing obligation prohibiting the discarding any individuals of species under quota. Among species presenting an elevated survival potential, plaice (Pleuronectes platessa) is one of the most discarded in the coastal otter trawl fishery in the English Channel. The objective of this study is to provide the most reliable estimates of plaice survival after release in commercial conditions, and to identify the factors that influence survival rates...
September 12, 2017: Journal of Environmental Management
https://www.readbyqxmd.com/read/28911322/sharing-fishers%C3%A2-ethnoecological-knowledge-of-the-european-pilchard-sardina-pilchardus-in-the-westernmost-fishing-community-in-europe
#18
Heitor de Oliveira Braga, Miguel Ângelo Pardal, Ulisses Miranda Azeiteiro
BACKGROUND: With the present difficulties in the conservation of sardines in the North Atlantic, it is important to investigate the local ecological knowledge (LEK) of fishermen about the biology and ecology of these fish. The ethnoecological data of European pilchard provided by local fishermen can be of importance for the management and conservation of this fishery resource. Thus, the present study recorded the ethnoecological knowledge of S. pilchardus in the traditional fishing community of Peniche, Portugal...
September 14, 2017: Journal of Ethnobiology and Ethnomedicine
https://www.readbyqxmd.com/read/28905436/dentition-of-the-apron-ray-discopyge-tschudii-elasmobranchii-narcinidae
#19
M C Spath, M Deli Antoni, G Delpiani
The present study provides quantitative and qualitative analyses of the dentition of Discopyge tschudii. Overall, 193 individuals (99 males and 94 females) of D. tschudii were collected on scientific trawl surveys conducted by the National Institute for Fisheries Research and Development (INIDEP) and commercial vessels in Argentina. Discopyge tschudii has rhombic-shaped teeth, arranged in a semipavement-like dentition; each tooth has an erect cusp slightly inclined posteriorly and holaulachorized root. Mature males have greater tooth lengths than females and immature specimens...
September 14, 2017: Journal of Fish Biology
https://www.readbyqxmd.com/read/28904746/discovery-and-characterization-of-single-nucleotide-polymorphisms-in-two-anadromous-alosine-fishes-of-conservation-concern
#20
Diana S Baetscher, Daniel J Hasselman, Kerry Reid, Eric P Palkovacs, John Carlos Garza
Freshwater habitat alteration and marine fisheries can affect anadromous fish species, and populations fluctuating in size elicit conservation concern and coordinated management. We describe the development and characterization of two sets of 96 single nucleotide polymorphism (SNP) assays for two species of anadromous alosine fishes, alewife and blueback herring (collectively known as river herring), that are native to the Atlantic coast of North America. We used data from high-throughput DNA sequencing to discover SNPs and then developed molecular genetic assays for genotyping sets of 96 individual loci in each species...
September 2017: Ecology and Evolution
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