Nikolaos I Kanellakis, John M Wrightson, Stephen Gerry, Nicholas Ilott, John P Corcoran, Eihab O Bedawi, Rachelle Asciak, Andrey Nezhentsev, Anand Sundaralingam, Rob J Hallifax, Greta M Economides, Lucy R Bland, Elizabeth Daly, Xuan Yao, Nick A Maskell, Robert F Miller, Derrick W Crook, Timothy S C Hinks, Tao Dong, Ioannis Psallidas, Najib M Rahman
BACKGROUND: Pleural infection is a common and severe disease with high morbidity and mortality worldwide. The knowledge of pleural infection bacteriology remains incomplete, as pathogen detection methods based on culture have insufficient sensitivity and are biased to selected microbes. We designed a study with the aim to discover and investigate the total microbiome of pleural infection and assess the correlation between bacterial patterns and 1-year survival of patients. METHODS: We assessed 243 pleural fluid samples from the PILOT study, a prospective observational study on pleural infection, with 16S rRNA next generation sequencing...
April 2022: The Lancet. Microbe