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Michael Soares

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https://www.readbyqxmd.com/read/28430437/discovery-of-an-hcv-ns5b-replicase-palm-site-allosteric-inhibitor-bms-929075-advanced-to-phase-1-clinical-studies
#1
Kap-Sun Yeung, Brett R Beno, Kyle Parcella, John A Bender, Katherine A Grant-Young, Andrew Nickel, Prashantha Gunaga, Prakash Anjanappa, Rajesh Onkardas Bora, Kumaravel Selvakumar, Karen Rigat, Ying-Kai Wang, Mengping Liu, Julie A Lemm, Kathy Mosure, Steven Sheriff, Changhong Wan, Mark Witmer, Kevin Kish, Umesh M Hanumegowda, Xiaoliang Zhuo, Yue-Zhong Shu, Dawn Parker, Roy Haskell, Alicia Ng, Qi Gao, Elizabeth Colston, Joseph Raybon, Dennis M Grasela, Kenneth S Santone, Min Gao, Nicholas A Meanwell, Michael W Sinz, Matthew G Soars, Jay O Knipe, Susan B Roberts, John F Kadow
The hepatitis C virus NS5B replicase is a prime target for the development of direct-acting antiviral drugs for the treatment of chronic HCV infection. Inspired by the overlay of bound structures of three structurally distinct NS5B palm site allosteric inhibitors, the high throughput screening hit anthranilic acid 4, the known benzofuran analog 5 and the benzothiadiazine derivative 6, an optimization process utilizing the simple benzofuran template 7 as a starting point for a fragment growing approach was pursued...
April 21, 2017: Journal of Medicinal Chemistry
https://www.readbyqxmd.com/read/28413018/plaa-mutations-cause-a-lethal-infantile-epileptic-encephalopathy-by-disrupting-ubiquitin-mediated-endolysosomal-degradation-of-synaptic-proteins
#2
Emma A Hall, Michael S Nahorski, Lyndsay M Murray, Ranad Shaheen, Emma Perkins, Kosala N Dissanayake, Yosua Kristaryanto, Ross A Jones, Julie Vogt, Manon Rivagorda, Mark T Handley, Girish R Mali, Tooba Quidwai, Dinesh C Soares, Margaret A Keighren, Lisa McKie, Richard L Mort, Noor Gammoh, Amaya Garcia-Munoz, Tracey Davey, Matthieu Vermeren, Diana Walsh, Peter Budd, Irene A Aligianis, Eissa Faqeih, Alan J Quigley, Ian J Jackson, Yogesh Kulathu, Mandy Jackson, Richard R Ribchester, Alex von Kriegsheim, Fowzan S Alkuraya, C Geoffrey Woods, Eamonn R Maher, Pleasantine Mill
During neurotransmission, synaptic vesicles undergo multiple rounds of exo-endocytosis, involving recycling and/or degradation of synaptic proteins. While ubiquitin signaling at synapses is essential for neural function, it has been assumed that synaptic proteostasis requires the ubiquitin-proteasome system (UPS). We demonstrate here that turnover of synaptic membrane proteins via the endolysosomal pathway is essential for synaptic function. In both human and mouse, hypomorphic mutations in the ubiquitin adaptor protein PLAA cause an infantile-lethal neurodysfunction syndrome with seizures...
April 10, 2017: American Journal of Human Genetics
https://www.readbyqxmd.com/read/28403159/improved-supervised-classification-of-accelerometry-data-to-distinguish-behaviors-of-soaring-birds
#3
Maitreyi Sur, Tony Suffredini, Stephen M Wessells, Peter H Bloom, Michael Lanzone, Sheldon Blackshire, Srisarguru Sridhar, Todd Katzner
Soaring birds can balance the energetic costs of movement by switching between flapping, soaring and gliding flight. Accelerometers can allow quantification of flight behavior and thus a context to interpret these energetic costs. However, models to interpret accelerometry data are still being developed, rarely trained with supervised datasets, and difficult to apply. We collected accelerometry data at 140Hz from a trained golden eagle (Aquila chrysaetos) whose flight we recorded with video that we used to characterize behavior...
2017: PloS One
https://www.readbyqxmd.com/read/28395334/natural-killer-cell-deficiency-alters-placental-development-in-rats
#4
Stephen J Renaud, Regan L Scott, Damayanti Chakraborty, Mohammad A K Rumi, Michael J Soares
Natural killer (NK) cells are the most prevalent leukocyte population in the uterus during early pregnancy. Natural killer cells contribute to uterine vascular (spiral artery) remodeling in preparation for the increased demand on these vessels later in pregnancy. A second wave of spiral artery modification is directed by invasive trophoblast cells. The significance of the initial wave of NK-cell-mediated vascular remodeling in species exhibiting deep trophoblast invasion such as humans and rats is not known...
January 1, 2017: Biology of Reproduction
https://www.readbyqxmd.com/read/28379466/mackinac-a-bridge-between-modelseed-and-cobrapy-to-generate-and-analyze-genome-scale-metabolic-models
#5
Michael Mundy, Helena Mendes-Soares, Nicholas Chia
Summary: Reconstructing and analyzing a large number of genome-scale metabolic models is a fundamental part of the integrated study of microbial communities; however, two of the most widely used frameworks for building and analyzing models use different metabolic network representations. Here we describe Mackinac, a Python package that combines ModelSEED's ability to automatically reconstruct metabolic models with COBRApy's advanced analysis capabilities to bridge the differences between the two frameworks and facilitate the study of the metabolic potential of microorganisms...
August 30, 2017: Bioinformatics
https://www.readbyqxmd.com/read/28324319/white-matter-measures-are-near-normal-in-controlled-hiv-infection-except-in-those-with-cognitive-impairment-and-longer-hiv-duration
#6
Lucette A Cysique, James R Soares, Guangqiang Geng, Maia Scarpetta, Kirsten Moffat, Michael Green, Bruce J Brew, Roland G Henry, Caroline Rae
The objective of the current study was to quantify the degree of white matter (WM) abnormalities in chronic and virally suppressed HIV-infected (HIV+) persons while carefully taking into account demographic and disease factors. Diffusion tensor imaging (DTI) was conducted in 40 HIV- and 82 HIV+ men with comparable demographics and life style factors. The HIV+ sample was clinically stable with successful viral control. Diffusion was measured across 32 non-colinear directions with a b-value of 1000 s/mm(2); fractional anisotropy (FA) and mean diffusivity (MD) maps were quantified with Itrack IDL...
March 21, 2017: Journal of Neurovirology
https://www.readbyqxmd.com/read/28316775/guarana-paullinia-cupana-mart-attenuates-methylmercury-induced-toxicity-in-caenorhabditis-elegans
#7
Leticia Priscilla Arantes, Tanara Vieira Peres, Pam Chen, Samuel Caito, Michael Aschner, Félix Alexandre Antunes Soares
The influence of routine guarana (Paullinia cupana) consumption on apparent tolerance to mercury intoxication has been proposed. The present study investigated this hypothesis in Caenorhabditis elegans, a suitable experimental model for studies in toxicology. Wild type (WT) and skn-1 (ok2315) worm strains were pretreated with guarana ethanolic extract (GEE) from larvae 1 (L1) to L4 stage and then exposed for 6 hours to methylmercury (MeHg). The analyses included evaluation of GEE's effects on lethality, developmental delay, feeding, locomotion, gene expression (sod-3, gst-4, sir-2...
November 1, 2016: Toxicology Research
https://www.readbyqxmd.com/read/28118660/association-between-tracheal-intubation-during-adult-in-hospital-cardiac-arrest-and-survival
#8
MULTICENTER STUDY
Lars W Andersen, Asger Granfeldt, Clifton W Callaway, Steven M Bradley, Jasmeet Soar, Jerry P Nolan, Tobias Kurth, Michael W Donnino
Importance: Tracheal intubation is common during adult in-hospital cardiac arrest, but little is known about the association between tracheal intubation and survival in this setting. Objective: To determine whether tracheal intubation during adult in-hospital cardiac arrest is associated with survival to hospital discharge. Design, Setting, and Participants: Observational cohort study of adult patients who had an in-hospital cardiac arrest from January 2000 through December 2014 included in the Get With The Guidelines-Resuscitation registry, a US-based multicenter registry of in-hospital cardiac arrest...
February 7, 2017: JAMA: the Journal of the American Medical Association
https://www.readbyqxmd.com/read/28108768/severe-hypercapnia-and-outcome-of-mechanically-ventilated-patients-with-moderate-or-severe-acute-respiratory-distress-syndrome
#9
Nicolas Nin, Alfonso Muriel, Oscar Peñuelas, Laurent Brochard, José Angel Lorente, Niall D Ferguson, Konstantinos Raymondos, Fernando Ríos, Damian A Violi, Arnaud W Thille, Marco González, Asisclo J Villagomez, Javier Hurtado, Andrew R Davies, Bin Du, Salvatore M Maggiore, Luis Soto, Gabriel D'Empaire, Dimitrios Matamis, Fekri Abroug, Rui P Moreno, Marco Antonio Soares, Yaseen Arabi, Freddy Sandi, Manuel Jibaja, Pravin Amin, Younsuck Koh, Michael A Kuiper, Hans-Henrik Bülow, Amine Ali Zeggwagh, Antonio Anzueto, Jacob I Sznajder, Andres Esteban
PURPOSE: To analyze the relationship between hypercapnia developing within the first 48 h after the start of mechanical ventilation and outcome in patients with acute respiratory distress syndrome (ARDS). PATIENTS AND METHODS: We performed a secondary analysis of three prospective non-interventional cohort studies focusing on ARDS patients from 927 intensive care units (ICUs) in 40 countries. These patients received mechanical ventilation for more than 12 h during 1-month periods in 1998, 2004, and 2010...
February 2017: Intensive Care Medicine
https://www.readbyqxmd.com/read/28074416/proceedings-of-r%C3%A3-animation-2017-the-french-intensive-care-society-international-congress
#10
Chtara Kamilia, Kais Regaieg, Najeh Baccouch, Hedi Chelly, Mabrouk Bahloul, Mounir Bouaziz, Ali Jendoubi, Ahmed Abbes, Houda Belhaouane, Oussama Nasri, Layla Jenzri, Salma Ghedira, Mohamed Houissa, Kamal Belkadi, Youness Harti, Afak Nsiri, Khalid Khaleq, Driss Hamoudi, Rachid Harrar, Camille Thieffry, Frédéric Wallet, Erika Parmentier-Decrucq, Raphaël Favory, Daniel Mathieu, Julien Poissy, Thomas Lafon, Philippe Vignon, Emmanuelle Begot, Alexandra Appert, Mathilde Hadj, Paul Claverie, Morgan Matt, Olivier Barraud, Bruno François, Amira Jamoussi, Amira Ben Jazia, Takoua Marhbène, Dhouha Lakhdhar, Jalila Ben Khelil, Mohamed Besbes, Julien Goutay, Caroline Blazejewski, Isabelle Joly-Durand, Isabelle Pirlet, Marie Pierre Weillaert, Sebastien Beague, Soufi Aziz, Reda Hafiane, Khalid Hattabi, Mohamed Aziz Bouhouri, Driss Hammoudi, Abdelaziz Fadil, Rachid Al Harrar, Khalid Zerouali, Fatma Kaaniche Medhioub, Rania Allela, Najla Ben Algia, Samar Cherif, Mohamed Taoufik Slaoui, Souhail Boubia, Y Hafiani, A Khaoudi, R Cherkab, W Elallam, C Elkettani, L Barrou, M Ridaii, Rihi El Mehdi, Caroline Schimpf, Assaf Mizrahi, Benoît Pilmis, Alban Le Monnier, Kelly Tiercelet, Mélanie Cherin, Cédric Bruel, Francois Philippart, Sébastien Bailly, Jc Lucet, Alain Lepape, François L'hériteau, Martine Aupée, Caroline Bervas, Sandrine Boussat, Anne Berger-Carbonne, Anaïs Machut, Anne Savey, Jean-François Timsit, Keyvan Razazi, Jérémy Rosman, Nicolas de Prost, Guillaume Carteaux, Chloe Jansen, Jean Winoc Decousser, Christian Brun-Buisson, Armand Mekontso Dessap, Aymen M'rad, Zouhour Ouali, Manel Barghouth, Achille Kouatchet, Rafael Mahieu, Emmanuel Weiss, David Schnell, Jean-Ralph Zahar, Margaux Artiguenave, Paktoris-Papine Sophie, Florence Espinasse, Faten El Sayed, Aurélien Dinh, Cyril Charron, Guillaume Geri, Antoine Vieillard-Baron, Xavier Repessé, Hatem Kallel, Claire Mayence, Stéphanie Houcke, Pascal Guegueniat, Didier Hommel, Kaouther Dhifaoui, Zied Hajjej, Amira Fatnassi, Walid Sellami, Iheb Labbene, Mustapha Ferjani, Fahmi Dachraoui, Sabrine Nakkaa, Abdelwaheb M'ghirbi, Ali Adhieb, Dhouha Ben Braiek, Kmar Hraiech, Ali Ousji, Islem Ouanes, Hammouda Zaineb, Saousen Ben Abdallah, Lamia Ouanes-Besbes, Fekri Abroug, Simon Klein, Mattéo Miquet, Jean-Marc Thouret, Vincent Peigne, Jean-Louis Daban, Mathieu Boutonnet, Bernard Lenoir, Takoua Merhbene, Celine Derreumaux, Thierry Seguin, Jean-Marie Conil, Charlotte Kelway, Valery Blasco, Cyril Nafati, Karim Harti, Laurent Reydellet, Jacques Albanese, Narjess Ben Aicha, Khaoula Meddeb, Ahmed Khedher, Jihene Ayachi, Nesrine Fraj, Nesrine Sma, Imed Chouchene, Mohamed Boussarsar, Soumaya Ben Yedder, Walid Samoud, Bousselmi Radhouene, Bousselmi Mariem, Asma Ammar, Asma Ben Cheikh, Hend Ben Lakhal, Messaouda Khelfa, Yamina Hamdaoui, Nabiha Bouafia, Timothée Trampont, Thomas Daix, Vincent Legarçon, Henri Hani Karam, Nicolas Pichon, Fatma Essafi, Nasreddine Foudhaili, Hafedh Thabet, Youssef Blel, Nozha Brahmi, Hanane Ezzouine, Mahmoud Kerrous, Saad El Haoui, Soufiane Ahdil, Abdellatif Benslama, Khalid Abidi, Tarek Dendane, Ssouni Oussama, Jihane Belayachi, Naoufal Madani, Redouane Abouqal, Amine Ali Zeggwagh, Hatem Ghadhoune, Anis Chaari, Guissouma Jihene, Hend Allouche, Insaf Trabelsi, Habib Brahmi, Mohamed Samet, Hatem El Ghord, Ben Sik Ali Habiba, Nouira Hajer, Najla Tilouch, Sondes Yaakoubi, Oussama Jaoued, Rim Gharbi, Mohamed Fekih Hassen, Souheil Elatrous, Julien Arcizet, Bertrand Leroy, Caroline Abdulmalack, Catherine Renzullo, Maël Hamet, Jean-Marc Doise, Jérôme Coutet, Chaigar Mohammed Cheikh, Zakaria Quechar, Magalie Joris, Dimitri Titeca Beauport, Loay Kontar, Delphine Lebon, Bérengère Gruson, Michel Slama, Jean-Pierre Marolleau, Julien Maizel, Julie Gorham, Lieveke Ameye, Thierry Berghmans, Marianne Paesmans, Jean-Paul Sculier, Anne-Pascale Meert, Max Guillot, Marie-Pierre Ledoux, Thierry Braun, Quentin Maestraggi, Baptiste Michard, Vincent Castelain, Raoul Herbrecht, Francis Schneider, Severine Couffin, David Lobo, Nicolas Mongardon, Gilles Dhonneur, Roman Mounier, Pierrick Le Borgne, Sophie Couraud, Jean-Etienne Herbrecht, Alexandra Boivin, François Lefebvre, Pascal Bilbault, Setti-Aouicha Zelmat, Djamila-Djahida Batouche, Fatima Mazour, Belkacem Chaffi, Nadia Benatta, Ali Habiba Sik, I Talik, Maxime Perrier, Eliane Gouteix, Claude Koubi, Annabelle Escavy, Victoria Guilbaut, Jean-Philippe Fosse, Rahma Ben Jazia, Ahmed Abdelghani, Pierre-Julien Cungi, Julien Bordes, Cédric Nguyen, Candice Pierrou, Maximilien Cruc, Alain Benois, Frédéric Duprez, Thierry Bonus, Grégory Cuvelier, Sandra Ollieuz, Sharam Machayekhi, Frédéric Paciorkowski, Gregory Reychler, Remi Coudroy, Arnaud W Thille, Xavier Drouot, Véronique Diaz, Jean-Claude Meurice, René Robert, Olfa Turki, Hmida Chokri Ben, Mona Assefi, Romain Deransy, Hélène Brisson, Antoine Monsel, Filomena Conti, Olivier Scatton, Olivier Langeron, Hassen Ben Ghezala, Salah Snouda, Chiekh Imen Ben, Moez Kaddour, Anwar Armel, Lafrikh Youness, Bensaid Abdelhak, Miloudi Youssef, Al Harrar Najib, Amouzoun Mustapha, Mtioui Noufel, Zamd Mohamed, El Khayat Salma, Medkouri Ghizlane, Benghanam Mohamed, Ramdani Benyounes, Florent Montini, Sébastien Moschietto, Emilien Gregoire, Guillaume Claisse, Julien Guiot, Philippe Morimont, Jean-Marie Krzesinski, Christophe Mariat, Bernard Lambermont, Etienne Cavalier, Pierre Delanaye, Soumia Benbernou, Sofiane Ilies, Abdelkader Azza, Khalida Bouyacoub, Meriem Louail, Houria Mokhtari-Djebli, Romain Arrestier, Fabrice Daviaud, Xavier Laborne Francois, Elsa Brocas, Gérald Choukroun, Oscar Peñuelas, José-Angel Lorente, Pablo Cardinal-Fernandez, José-Maria Rodriguez, José-Antonio Aramburu, Andres Esteban, Fernando Frutos-Vivar, Laurent Bitker, Nicolas Costes, Didier Le Bars, Franck Lavenne, Mojgan Devouassoux, Jean-Christophe Richard, Malika Mechati, Marc Gainnier, Laurent Papazian, Christophe Guervilly, Aude Garnero, Jean Michel Arnal, Hadrien Roze, Jean Christophe Richard, Benjamin Repusseau, Antoine Dewitte, Olivier Joannes-Boyau, Alexandre Ouattara, Nadia Harbouze, A M Amine, A G Olandzobo, Alexandre Herbland, Marie Richard, Nicolas Girard, Lucile Lambron, Olivier Lesieur, Sarah Wainschtein, Sidonie Hubert, Albane Hugues, Marc Tran, Philippe Bouillard, Vlad Loteanu, Maxime Leloup, Alexandra Laurent, Florent Lheureux, Alessia Prestifilippo, Martin Delgado Maria Cruz, Rigal Romain, Massimo Antonelli, Torra Lluis Blanch, Franck Bonnetain, Maria Grazzia-Bocci, Jordi Mancebo, Emmanuel Samain, Hebert Paul, Gilles Capellier, Taissa Zavgorodniaia, Marion Soichot, Isabelle Malissin, Sebastian Voicu, Pierre Garçon, Antoine Goury, Lamia Kerdjana, Nicolas Deye, Emmanuel Bourgogne, Bruno Megarbane, Olfa Mejri, Marwa Ben Hmida, Salma Tannous, Lucie Chevillard, Laurence Labat, Patricia Risede, Hana Fredj, Maxime Léger, Marion Brunet, Gaël Le Roux, David Boels, Nicolas Lerolle, Souaad Farah, Hélène Amiel-Niemann, Nathalie Kubis, Xavier Declèves, Nicoals Peyraux, Frederic Baud, Micaela Serafini, Jean-Claude Alvarez, Annette Heinzelman, Mathieu Jozwiak, Sandrine Millasseau, Jean-Louis Teboul, Jean-Emmanuel Alphonsine, François Depret, Nathalie Richard, Pierre Attal, Christian Richard, Xavier Monnet, Denis Chemla, Salma Jerbi, Wafa Khedhiri, Hatem Necib, Paolo Scarfo, Charles Chevalier, Michael Piagnerelli, Alexandre Lafont, Antoine Galy, Claire Mancia, Amel Zerhouni, Kheira Tabeliouna, Ali Gaja, Bassem Hamrouni, Abir Malouch, Sami Fourati, Rihab Messaoud, Youssef Zarrouki, Amra Ziadi, Manal Rhezali, Zahira Zouizra, Drissi Boumzebra, Mohamed Abdennasser Samkaoui, Jennifer Brunet, Bertrand Canoville, Pierre Verrier, Calin Ivascau, Amélie Seguin, Xavier Valette, Damien Du Cheyron, Cedric Daubin, Wulfran Bougouin, Nadia Aissaoui, Lionel Lamhaut, Daniel Jost, Carole Maupain, Frankie Beganton, Adrien Bouglé, Florence Dumas, Eloi Marijon, Xavier Jouven, Alain Cariou, Florent Poirson, Ulriikka Chaput, Thomas Beeken, Leclerc Maxime, Oueslati Haikel, Dominique Vodovar, Jonathan Chelly, Philippe Marteau, Richard Chocron, Philippe Juvin, Thomas Loeb, Frederic Adnet, Eric Lecarpentier, Antoine Riviere, Bertand De Cagny, Thierry Soupison, Elodie Privat, Joséphine Escutnaire, Cyrielle Dumont, Valentine Baert, Christian Vilhelm, Hervé Hubert, Stéphane Leteurtre, Marion Fresco, Michael Bubenheim, Gaetan Beduneau, Dorothée Carpentier, Steven Grange, Elise Artaud-Macari, Benoit Misset, Fabienne Tamion, Christophe Girault, Guillaume Dumas, Sylvie Chevret, Virginie Lemiale, Djamel Mokart, Julien Mayaux, Frédéric Pène, Martine Nyunga, Pierre Perez, Anne-Sophie Moreau, Fabrice Bruneel, François Vincent, Kada Klouche, Jean Reignier, Antoine Rabbat, Elie Azoulay, Jean-Pierre Frat, Stéphanie Ragot, Jean-Michel Constantin, Gwenael Prat, Alain Mercat, Thierry Boulain, Alexandre Demoule, Jérôme Devaquet, Saad Nseir, Julien Charpentier, Laurent Argaud, Pascal Beuret, Jean-Damien Ricard, Christelle Teiten, Nicolas Marjanovic, Nicola Palamin, Erwan L'Her, Arthur Bailly, Julie Boisramé-Helms, Benoit Champigneulle, Toufik Kamel, Emmanuelle Mercier, Aurélie Le Thuaut, Jean-Baptiste Lascarrou, Amélie Rolle, Audrey De Jong, Gérald Chanques, Samir Jaber, Geoffroy Hariri, Jean-Luc Baudel, Vincent Dubée, Gabriel Preda, Simon Bourcier, Jeremie Joffre, Naïke Bigé, Hafid Ait-Oufella, Eric Maury, Houda Mater, Hamid Merdji, David Grimaldi, Christophe Rousseau, Jean-Paul Mira, Jean-Daniel Chiche, Ines Sedghiani, A Benabderrahim, Dhekra Hamdi, Asma Jendoubi, Mohamed Ali Cherif, Youssef Zied El Hechmi, Jerbi Zouheir, François Bagate, Radhwen Bousselmi, Frédérique Schortgen, Pierre Asfar, Emmanuel Guérot, Grelon Fabien, Nadia Anguel, Lasocki Sigismond, Henry-Lagarrigue Matthieu, Frédéric Gonzalez, Legay François, Christophe Guitton, Maleka Schenck, Doise Jean-Marc, Didier Dreyfuss, Peter Radermacher, Antoine Frère, Laurent Martin-Lefèvre, Gwenhaël Colin, Maud Fiancette, Matthieu Henry-Laguarrigue, Jean-Claude Lacherade, Christine Lebert, Isabelle Vinatier, Aihem Yehia, Aurélie Joret, Nicolas Menunier-Beillard, Dalila Benzekri-Lefevre, Arnaud Desachy, Fréderic Bellec, Gaëtan Plantefève, Jean-Pierre Quenot, Ferhat Meziani, Elsa Tavernier, Stephan Ehrmann, Nicolas Chudeau, Tommy Raveau, Valérie Moal, Pascal Houillier, Emmanuelle Rouve, Karim Lakhal, Charlotte Salmon Gandonnière, Youenn Jouan, Laetitia Bodet-Contentin, Adrien Balmier, Jonathan Messika, Etienne De Montmollin, Victorine Pouyet, Benjamin Sztrymf, Abirami Thiagarajah, Damien Roux, Marc Pineton De Chambrun, Charles-Edouard Luyt, François Beloncle, Nathalie Zapella, Stanislas Ledochowsky, Nicolas Terzi, Jean-Marc Mazou, Romain Sonneville, Sylvie Paulus, Yannick Fedun, Mickael Landais, Jean-Herlé Raphalen, Alain Combes, Zahir Amoura, Aemilia Jacquemin, Felipe Guerrero, Bertrand Marcheix, Nicolas Hernandez, Olivier Fourcade, Bernard Georges, Clément Delmas, Sarah Makoudi, Audrey Genton, Rémy Bernard, Guillaume Lebreton, Julien Amour, Charlotte Mazet, Fanny Bounes, Gurbuz Murat, Laure Cronier, Guillaume Robin, Caroline Biendel, Stein Silva, Samia Boubeche, Caroline Abriou, Véronique Wurtz, Vincent Scherrer, Nathalie Rey, Gioia Gastaldi, Benoit Veber, Fabien Doguet, Arnaud Gay, Bertrand Dureuil, Emmanuel Besnier, Antoine Rouget, Guillaume Gantois, Eric Magalhaes, Ruben Wanono, Roland Smonig, Mathilde Lermuzeaux, Jordane Lebut, Andremont Olivier, Claire Dupuis, Aguila Radjou, Bruno Mourvillier, Mathilde Neuville, Marie Pia D'ortho, Lila Bouadma, Anny Rouvel-Tallec, Marika Rudler, Nicolas Weiss, Vincent Perlbarg, Damien Galanaud, Dominique Thabut, Emna Rachdi, Ghada Mhamdi, Ahlem Trifi, Rim Abdelmalek, Sami Abdellatif, Foued Daly, Rochdi Nasri, Hanene Tiouiri, Salah Ben Lakhal, Geoffroy Rousseau, Romain Asmolov, Leslie Grammatico-Guillon, Adrien Auvet, Said Laribi, Denis Garot, Pierre François Dequin, Antoine Guillon, Jean-Louis Fergé, Gwénolé Abgrall, Ronan Hinault, Shazima Vally, Benoit Roze, Agathe Chaplain, Cyrille Chabartier, Anne-Charlotte Savidan, Sabia Marie, Andre Cabie, Dabor Resiere, Ruddy Valentino, Hossein Mehdaoui, Lucas Benarous, Marième Soda-Diop, Fouad Bouzana, Gilles Perrin, Jeremy Bourenne, Béatrice Eon, Dominique Lambert, Agnes Trebuchon, Géraldine Poncelet, Fleur Le Bourgeois, Levy Michael, Guillot Camille, Jérôme Naudin, Anna Deho, Stéphane Dauger, Michaël Sauthier, Krystale Bergeron-Gallant, Guillaume Emeriaud, Philippe Jouvet, Nicolas Tiebergien, Matthias Jacquet-Lagrèze, Jean-Luc Fellahi, Florent Baudin, Sandrine Essouri, Etienne Javouhey, Claude Guérin, Marie Lampin, Ouardia Mamouri, Patrick Devos, Yasemin Karaca-Altintas, Matthieu Vinchon, David Brossier, Redha Eltaani, Sonia Teyssedre, Meyet Sabine, Jean-Christophe Bouchut, Olivier Peguet, Lucie Petitdemange, Anne Sophie Guilbert, Nabil Tabet Aoul, Zakaria Addou, Nabil Aouffen, Benqqa Anas, Samira Kalouch, Khalid Yaqini, Aziz Chlilek, Rchi Abdou, Perrine Gravellier, Julie Chantreuil, Nadine Travers, Antoine Listrat, Claire Le Reun, Geraldine Favrais, Zoe Coppere, Stéphane Blanot, Juliette Montmayeur, Régis Bronchard, Stephane Rolando, Gilles Orliaguet, Pierre-Louis Leger, Jérôme Rambaud, Emilie Thueux, Alexandra De Larrard, Véronique Berthelot, Julien Denot, Marie Reymond, Alain Amblard, Sarah Morin-Zorman, Etienne Lengliné, Claire Pichereau, Eric Mariotte, Canet Emmanuel, Julien Poujade, Guillaume Trumpff, Ralf Janssen-Langenstein, Marie-Line Harlay, Noorah Zaid, Nawel Ait-Ammar, Christine Bonnal, Jean-Claude Merle, Francoise Botterel, Eric Levesque, Zakaria Riad, Mehdi Mezidi, Hodane Yonis, Mylène Aublanc, Sophie Perinel-Ragey, Floriane Lissonde, Aurore Louf-Durier, Romain Tapponnier, Bruno Louis, Jean-Marie Forel, Magali Bisbal, Samuel Lehingue, Romain Rambaud, Mélanie Adda, Sami Hraiech, Elisa Marchi, Antoine Roch, Vincent Guerin, Sacha Rozencwajg, Matthieu Schmidt, Guillaume Hekimian, Nicolas Bréchot, Jean Louis Trouillet, Sébastien Besset, Guillaume Franchineau, Ania Nieszkowska, Leprince Pascal, Maud Loiselle, Chemam Sarah, Dangers Laurence, Thomas Guillemette, Alice Jacquens, Sebastien Kerever, Bertrand Guidet, Philippe Aegerter, Vincent Das, Muriel Fartoukh, Jan Hayon, Mathieu Desmard, Jean-Pierre Fulgencio, Benjamin Zuber, A Soufi, K Khaleq, D Hamoudi, Charlotte Garret, Matthieu Peron, Emmanuel Coron, Cédric Bretonnière, Etienne Audureau, Winters Audrey, Duvoux Christophe, Jacquelinet Christian, Azoulay Daniel, Feray Cyrille, Wissal Aissaoui, Kawtar Rghioui, Wafae Haddad, Houcine Barrou, Anna Carteaux-Taeib, Renato Lupinacci, Gilles Manceau, Florence Jeune, Christophe Tresallet, Sahar Habacha, Ines Fathallah, Aymen Zoubli, Rafaa Aloui, Nadia Kouraichi, Emilie Jouet, Julie Badin, Brice Fermier, Marc Feller, Mathieu Serie, Jérôme Pillot, William Marie, Chloé Gisbert-Mora, Camille Vinclair, Pierre Lesbordes, Pascal Mathieu, Fabienne De Brabant, Emmanuel Muller, Marie-Aline Robaux, Mikhael Giabicani, Antoine Marchalot, Stéphanie Gelinotte, Pierre Louis Declercq, Jean-Pierre Eraldi, François Bougerol, Nicolas Meunier-Beillard, Hervé Devilliers, Jean-Philippe Rigaud, Camille Verrière, Fanny Ardisson, Nancy Kentish-Barnes, Gwenaëlle Jacq, Akli Chermak, Alexandre Lautrette, Matthieu Legrand, Alexis Soummer, Guillaume Thiery, Alice Cottereau, Emmanuel Canet, Marie Caujolle, Jérôme Allyn, Dorothée Valance, Caroline Brulliard, Olivier Martinet, Julien Jabot, Thomas Gallas, David Vandroux, Nicolas Allou, Arthur Durand, Rémi Nevière, Florian Delguste, Eric Boulanger, Sebastien Preau, Ruste Martin, Hélène Cochet, Jean Pierre Ponthus, Virginie Amilien, Martial Tchir, Elise Barsam, Mohsen Ayoub, Jean Francois Georger, Izaute Guillame, Julie Assaraf, Simona Tripon, Maxime Mallet, Guilaume Barbara, Guillaume Louis, Stéphane Gaudry, Nicolas Barbarot, Angéline Jamet, Hervé Outin, Sébastien Gibot, Pierre-Edouard Bollaert, Mathilde Holleville, Stéphane Legriel, Anne Laure Chateauneuf, Sébastien Cavelot, Jean-Denis Moyer, Jean Pierre Bedos, Philippe Merle, Aurelie Laine, De Sa Natalie, Mathieu Cornuault, Jérome Libot, Karim Asehnoune, Bertrand Rozec, Jacques Dantal, Michel Videcoq, Thècle Degroote, Emmanuelle Jaillette, Farid Zerimech, Balduyck Malika, Jean-François Llitjos, Marlène Amara, Guillaume Lacave, Béatrice Pangon, José Mavinga, Joseph Nsiala Makunza, M E Mafuta, Yves Yanga, Amisi Eric, Jp Ilunga, Ma Kilembe, Fanny Alby-Laurent, Julie Toubiana, Amel Mokline, Achraf Laajili, Helmi Amri, Imene Rahmani, Nidhal Mensi, Lazheri Gharsallah, Sofiene Tlaili, Bahija Gasri, Rym Hammouda, Amen Allah Messadi, Pierre-Antoine Allain, Nathallie Gault, Catherine Paugam-Burtz, Arnaud Foucrier, Bassem Chatbri, Yousra Bourbiaa, Lamia Thabet, Arthur Neuschwander, Looten Vincent, Jennifer Beck, Chhor Vibol, Yavchitz Amelie, Matthieu Resche-Rigon, Jean MantzRomain Pirracchio, Côme Bureau, Maxens Decavèle, Sébastien Campion, Roukia Ainsouya, Marie-Cécile Niérat, Hélène Prodanovic, Mathieu Raux, Thomas Similowski, Bruno-Pierre Dubé, Suela Demiri, Martin Dres, Faten May, Hervé Quintard, Ilias Kounis, Faouzi Saliba, Stephane André, Marc Boudon, Philippe Ichai, Aline Younes, Lionel Nakad, Audrey Coilly, Teresa Antonini, Rodolphe Sobesky, Eleonora De Martin, Didier Samuel, Noemie Hubert, Mai-Anh Nay, Johann Auchabie, Bruno Giraudeau, Reignier Jean, Michaël Darmon, Stephane Ruckly, Maïté Garrouste-Orgeas, Elisabeth Gratia, Dany Goldgran-Toledano, Samir Jamali, Anne Sylvie Dumenil, Carole Schwebel, Laurent Brisard, Philippe Bizouarn, Thierry Lepoivre, Johanna Nicolet, Jean Christophe Rigal, Jean Christian Roussel, Cherifa Cheurfa, Julien Abily, Thomas Lescot, Isaline Page, Stéphanie Warnier, Monique Nys, Anne-Françoise Rousseau, Pierre Damas, Fabrice Uhel, Mathieu Lesouhaitier, Murielle Grégoire, Baptiste Gaudriot, Arnaud Gacouin, Yves Le Tulzo, Erwan Flecher, Karin Tarte, Jean-Marc Tadié, Quentin Georges, M Soares, Kyeongman Jeon, Sandra Oeyen, Chin Kook Rhee, Pascale Gruber, Marlies Ostermann, Quentin Hill, Peter Depuydt, Christelle Ferra, Alice Muller, Bourmaud Aurelie, Christopher Niles, Fabien Herbert, Sylviane Pied, Séverine Loridant, Nadine François, Anne Bignon, Boualem Sendid, Caroline Lemaitre, Celine Dupre, Aymen Zayene, Lucie Portier, Nathalie De Freitas Caires, Philippe Lassalle, Aymeric Le Neindre, Pascal Selot, Daniel Ferreiro, Maria Bonarek, Stépahen Henriot, Julie Rodriguez, Mara Taddei, Mauro Di Bari, Cheryl Hickmann, Diego Castanares-Zapatero, Louise Deldicque, Peter Van Den Bergh, Gilles Caty, Jean Roeseler, Marc Francaux, Pierre-François Laterre, Bastien Dupuis, Sharam Machayeckhi, Celine Sarfati, Alex Moore, Paula Mendialdua, Emilie Rodet, Catherine Pilorge, Francois Stephan, Saida Rezaiguia-Delclaux, Jonathan Dugernier, Michel Hesse, Thibaud Jumetz, Emilie Bialais, Virginie Depoortere, Jean Bernard Michotte, Xavier Wittebole, François Jamar
No abstract text is available yet for this article.
January 2017: Annals of Intensive Care
https://www.readbyqxmd.com/read/28063987/a-mathematical-model-for-the-determination-of-forming-tissue-moduli-in-needled-nonwoven-scaffolds
#11
João S Soares, Will Zhang, Michael S Sacks
Formation of engineering tissues (ET) remains an important scientific area of investigation for both clinical translational and mechanobiological studies. Needled-nonwoven (NNW) scaffolds represent one of the most ubiquitous biomaterials based on their well-documented capacity to sustain tissue formation and the unique property of substantial construct stiffness amplification, the latter allowing for very sensitive determination of forming tissue modulus. Yet, their use in more fundamental studies is hampered by the lack of: (1) substantial understanding of the mechanics of the NNW scaffold itself under finite deformations and means to model the complex mechanical interactions between scaffold fibers, cells, and de novo tissue; and (2) rational models with reliable predictive capabilities describing their evolving mechanical properties and their response to mechanical stimulation...
March 15, 2017: Acta Biomaterialia
https://www.readbyqxmd.com/read/27914908/association-between-ventilatory-settings-and-development-of-acute-respiratory-distress-syndrome-in-mechanically-ventilated-patients-due-to-brain-injury
#12
Eva Tejerina, Paolo Pelosi, Alfonso Muriel, Oscar Peñuelas, Yuda Sutherasan, Fernando Frutos-Vivar, Nicolás Nin, Andrew R Davies, Fernando Rios, Damian A Violi, Konstantinos Raymondos, Javier Hurtado, Marco González, Bin Du, Pravin Amin, Salvatore M Maggiore, Arnaud W Thille, Marco Antonio Soares, Manuel Jibaja, Asisclo J Villagomez, Michael A Kuiper, Younsuck Koh, Rui P Moreno, Amine Ali Zeggwagh, Dimitrios Matamis, Antonio Anzueto, Niall D Ferguson, Andrés Esteban
PURPOSE: In neurologically critically ill patients with mechanical ventilation (MV), the development of acute respiratory distress syndrome (ARDS) is a major contributor to morbidity and mortality, but the role of ventilatory management has been scarcely evaluated. We evaluate the association of tidal volume, level of PEEP and driving pressure with the development of ARDS in a population of patients with brain injury. MATERIALS AND METHODS: We performed a secondary analysis of a prospective, observational study on mechanical ventilation...
April 2017: Journal of Critical Care
https://www.readbyqxmd.com/read/27807143/hif-kdm3a-mmp12-regulatory-circuit-ensures-trophoblast-plasticity-and-placental-adaptations-to-hypoxia
#13
Damayanti Chakraborty, Wei Cui, Gracy X Rosario, Regan L Scott, Pramod Dhakal, Stephen J Renaud, Makoto Tachibana, M A Karim Rumi, Clifford W Mason, Adam J Krieg, Michael J Soares
The hemochorial placenta develops from the coordinated multilineage differentiation of trophoblast stem (TS) cells. An invasive trophoblast cell lineage remodels uterine spiral arteries, facilitating nutrient flow, failure of which is associated with pathological conditions such as preeclampsia, intrauterine growth restriction, and preterm birth. Hypoxia plays an instructive role in influencing trophoblast cell differentiation and regulating placental organization. Key downstream hypoxia-activated events were delineated using rat TS cells and tested in vivo, using trophoblast-specific lentiviral gene delivery and genome editing...
November 15, 2016: Proceedings of the National Academy of Sciences of the United States of America
https://www.readbyqxmd.com/read/27738994/human-subcortical-brain-asymmetries-in-15-847-people-worldwide-reveal-effects-of-age-and-sex
#14
Tulio Guadalupe, Samuel R Mathias, Theo G M vanErp, Christopher D Whelan, Marcel P Zwiers, Yoshinari Abe, Lucija Abramovic, Ingrid Agartz, Ole A Andreassen, Alejandro Arias-Vásquez, Benjamin S Aribisala, Nicola J Armstrong, Volker Arolt, Eric Artiges, Rosa Ayesa-Arriola, Vatche G Baboyan, Tobias Banaschewski, Gareth Barker, Mark E Bastin, Bernhard T Baune, John Blangero, Arun L W Bokde, Premika S W Boedhoe, Anushree Bose, Silvia Brem, Henry Brodaty, Uli Bromberg, Samantha Brooks, Christian Büchel, Jan Buitelaar, Vince D Calhoun, Dara M Cannon, Anna Cattrell, Yuqi Cheng, Patricia J Conrod, Annette Conzelmann, Aiden Corvin, Benedicto Crespo-Facorro, Fabrice Crivello, Udo Dannlowski, Greig I de Zubicaray, Sonja M C de Zwarte, Ian J Deary, Sylvane Desrivières, Nhat Trung Doan, Gary Donohoe, Erlend S Dørum, Stefan Ehrlich, Thomas Espeseth, Guillén Fernández, Herta Flor, Jean-Paul Fouche, Vincent Frouin, Masaki Fukunaga, Jürgen Gallinat, Hugh Garavan, Michael Gill, Andrea Gonzalez Suarez, Penny Gowland, Hans J Grabe, Dominik Grotegerd, Oliver Gruber, Saskia Hagenaars, Ryota Hashimoto, Tobias U Hauser, Andreas Heinz, Derrek P Hibar, Pieter J Hoekstra, Martine Hoogman, Fleur M Howells, Hao Hu, Hilleke E Hulshoff Pol, Chaim Huyser, Bernd Ittermann, Neda Jahanshad, Erik G Jönsson, Sarah Jurk, Rene S Kahn, Sinead Kelly, Bernd Kraemer, Harald Kugel, Jun Soo Kwon, Herve Lemaitre, Klaus-Peter Lesch, Christine Lochner, Michelle Luciano, Andre F Marquand, Nicholas G Martin, Ignacio Martínez-Zalacaín, Jean-Luc Martinot, David Mataix-Cols, Karen Mather, Colm McDonald, Katie L McMahon, Sarah E Medland, José M Menchón, Derek W Morris, Omar Mothersill, Susana Munoz Maniega, Benson Mwangi, Takashi Nakamae, Tomohiro Nakao, Janardhanan C Narayanaswaamy, Frauke Nees, Jan E Nordvik, A Marten H Onnink, Nils Opel, Roel Ophoff, Marie-Laure Paillère Martinot, Dimitri Papadopoulos Orfanos, Paul Pauli, Tomáš Paus, Luise Poustka, Janardhan Yc Reddy, Miguel E Renteria, Roberto Roiz-Santiáñez, Annerine Roos, Natalie A Royle, Perminder Sachdev, Pascual Sánchez-Juan, Lianne Schmaal, Gunter Schumann, Elena Shumskaya, Michael N Smolka, Jair C Soares, Carles Soriano-Mas, Dan J Stein, Lachlan T Strike, Roberto Toro, Jessica A Turner, Nathalie Tzourio-Mazoyer, Anne Uhlmann, Maria Valdés Hernández, Odile A van den Heuvel, Dennis van der Meer, Neeltje E M van Haren, Dick J Veltman, Ganesan Venkatasubramanian, Nora C Vetter, Daniella Vuletic, Susanne Walitza, Henrik Walter, Esther Walton, Zhen Wang, Joanna Wardlaw, Wei Wen, Lars T Westlye, Robert Whelan, Katharina Wittfeld, Thomas Wolfers, Margaret J Wright, Jian Xu, Xiufeng Xu, Je-Yeon Yun, JingJing Zhao, Barbara Franke, Paul M Thompson, David C Glahn, Bernard Mazoyer, Simon E Fisher, Clyde Francks
The two hemispheres of the human brain differ functionally and structurally. Despite over a century of research, the extent to which brain asymmetry is influenced by sex, handedness, age, and genetic factors is still controversial. Here we present the largest ever analysis of subcortical brain asymmetries, in a harmonized multi-site study using meta-analysis methods. Volumetric asymmetry of seven subcortical structures was assessed in 15,847 MRI scans from 52 datasets worldwide. There were sex differences in the asymmetry of the globus pallidus and putamen...
October 13, 2016: Brain Imaging and Behavior
https://www.readbyqxmd.com/read/27737959/mutations-in-genes-encoding-condensin-complex-proteins-cause-microcephaly-through-decatenation-failure-at-mitosis
#15
Carol-Anne Martin, Jennie E Murray, Paula Carroll, Andrea Leitch, Karen J Mackenzie, Mihail Halachev, Ahmed E Fetit, Charlotte Keith, Louise S Bicknell, Adeline Fluteau, Philippe Gautier, Emma A Hall, Shelagh Joss, Gabriela Soares, João Silva, Michael B Bober, Angela Duker, Carol A Wise, Alan J Quigley, Shubha R Phadke, Andrew J Wood, Paola Vagnarelli, Andrew P Jackson
Compaction of chromosomes is essential for accurate segregation of the genome during mitosis. In vertebrates, two condensin complexes ensure timely chromosome condensation, sister chromatid disentanglement, and maintenance of mitotic chromosome structure. Here, we report that biallelic mutations in NCAPD2, NCAPH, or NCAPD3, encoding subunits of these complexes, cause microcephaly. In addition, hypomorphic Ncaph2 mice have significantly reduced brain size, with frequent anaphase chromatin bridge formation observed in apical neural progenitors during neurogenesis...
October 1, 2016: Genes & Development
https://www.readbyqxmd.com/read/27694231/genomic-comparisons-of-lactobacillus-crispatus-and-lactobacillus-iners-reveal-potential-ecological-drivers-of-community-composition-in-the-vagina
#16
Michael T France, Helena Mendes-Soares, Larry J Forney
Lactobacillus crispatus and Lactobacillus iners are common inhabitants of the healthy human vagina. These two species are closely related and are thought to perform similar ecological functions in the vaginal environment. Temporal data on the vaginal microbiome have shown that nontransient instances of cooccurrence are uncommon, while transitions from an L. iners-dominated community to one dominated by L. crispatus, and vice versa, occur often. This suggests that there is substantial overlap in the fundamental niches of these species...
December 15, 2016: Applied and Environmental Microbiology
https://www.readbyqxmd.com/read/27688235/location-of-in-hospital-cardiac-arrest-in-the-united-states-variability-in-event-rate-and-outcomes
#17
Sarah M Perman, Emily Stanton, Jasmeet Soar, Robert A Berg, Michael W Donnino, Mark E Mikkelsen, Dana P Edelson, Matthew M Churpek, Lin Yang, Raina M Merchant
BACKGROUND: In-hospital cardiac arrest (IHCA) is a major public health problem with significant mortality. A better understanding of where IHCA occurs in hospitals (intensive care unit [ICU] versus monitored ward [telemetry] versus unmonitored ward) could inform strategies for reducing preventable deaths. METHODS AND RESULTS: This is a retrospective study of adult IHCA events in the Get with the Guidelines-Resuscitation database from January 2003 to September 2010...
September 29, 2016: Journal of the American Heart Association
https://www.readbyqxmd.com/read/27590448/mminte-an-application-for-predicting-metabolic-interactions-among-the-microbial-species-in-a-community
#18
Helena Mendes-Soares, Michael Mundy, Luis Mendes Soares, Nicholas Chia
BACKGROUND: The explosive growth of microbiome research has yielded great quantities of data. These data provide us with many answers, but raise just as many questions. 16S rDNA-the backbone of microbiome analyses-allows us to assess α-diversity, β-diversity, and microbe-microbe associations, which characterize the overall properties of an ecosystem. However, we are still unable to use 16S rDNA data to directly assess the microbe-microbe and microbe-environment interactions that determine the broader ecology of that system...
2016: BMC Bioinformatics
https://www.readbyqxmd.com/read/27546358/the-p4-health-spectrum-a-predictive-preventive-personalized-and-participatory-continuum-for-promoting-healthspan
#19
REVIEW
Michael Sagner, Amy McNeil, Pekka Puska, Charles Auffray, Nathan D Price, Leroy Hood, Carl J Lavie, Ze-Guang Han, Zhu Chen, Samir Kumar Brahmachari, Bruce S McEwen, Marcelo B Soares, Rudi Balling, Elissa Epel, Ross Arena
Chronic diseases (i.e., noncommunicable diseases), mainly cardiovascular disease, cancer, respiratory diseases and type-2-diabetes, are now the leading cause of death, disability and diminished quality of life on the planet. Moreover, these diseases are also a major financial burden worldwide, significantly impacting the economy of many countries. Healthcare systems and medicine have progressively improved upon the ability to address infectious diseases and react to adverse health events through both surgical interventions and pharmacology; we have become efficient in delivering reactive care (i...
August 18, 2016: Progress in Cardiovascular Diseases
https://www.readbyqxmd.com/read/27526323/modulation-of-long-noncoding-rnas-by-risk-snps-underlying-genetic-predispositions-to-prostate-cancer
#20
Haiyang Guo, Musaddeque Ahmed, Fan Zhang, Cindy Q Yao, SiDe Li, Yi Liang, Junjie Hua, Fraser Soares, Yifei Sun, Jens Langstein, Yuchen Li, Christine Poon, Swneke D Bailey, Kinjal Desai, Teng Fei, Qiyuan Li, Dorota H Sendorek, Michael Fraser, John R Prensner, Trevor J Pugh, Mark Pomerantz, Robert G Bristow, Mathieu Lupien, Felix Y Feng, Paul C Boutros, Matthew L Freedman, Martin J Walsh, Housheng Hansen He
Long noncoding RNAs (lncRNAs) represent an attractive class of candidates to mediate cancer risk. Through integrative analysis of the lncRNA transcriptome with genomic data and SNP data from prostate cancer genome-wide association studies (GWAS), we identified 45 candidate lncRNAs associated with risk to prostate cancer. We further evaluated the mechanism underlying the top hit, PCAT1, and found that a risk-associated variant at rs7463708 increases binding of ONECUT2, a novel androgen receptor (AR)-interacting transcription factor, at a distal enhancer that loops to the PCAT1 promoter, resulting in upregulation of PCAT1 upon prolonged androgen treatment...
October 2016: Nature Genetics
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