keyword
MENU ▼
Read by QxMD icon Read
search

Crop model

keyword
https://www.readbyqxmd.com/read/28324851/assessing-the-impacts-of-best-management-practices-on-nitrate-pollution-in-an-agricultural-dominated-lowland-catchment-considering-environmental-protection-versus-economic-development
#1
Marcelo B Haas, Björn Guse, Nicola Fohrer
Water quality is strongly affected by nitrate inputs in agricultural catchments. Best Management Practices (BMPs) are alternative practices aiming to mitigate the impacts derived from agricultural activities and to improve water quality. Management activities are influenced by different governmental policies like the Water Framework Directive (WFD) and the Renewable Energy Sources Act (EEG). Their distinct goals can be contrasting and hamper an integrated sustainable development. Both need to be addressed in the actual conjuncture in rural areas...
March 15, 2017: Journal of Environmental Management
https://www.readbyqxmd.com/read/28324258/optimizing-irrigation-and-nitrogen-for-wheat-through-empirical-modeling-under-semi-arid-environment
#2
Umer Saeed, Syed Aftab Wajid, Tasneem Khaliq, Zahir Ahmad Zahir
Nitrogen fertilizer availability to plants is strongly linked with water availability. Excessive or insufficient use of nitrogen can cause reduction in grain yield of wheat and environmental issues. The per capita per annum water availability in Pakistan has reduced to less than 1000 m(3) and is expected to reach 800 m(3) during 2025. Irrigating crops with 3 or more than 3 in. of depth without measuring volume of water is not a feasible option anymore. Water productivity and economic return of grain yield can be improved by efficient management of water and nitrogen fertilizer...
March 21, 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28324251/simulating-changes-in-cropping-practises-in-conventional-and-glyphosate-tolerant-maize-i-effects-on-weeds
#3
Nathalie Colbach, Alice Fernier, Valérie Le Corre, Antoine Messéan, Henri Darmency
Herbicide-tolerant (HT) crops such as those tolerant to glyphosate simplify weed management and make it more efficient, at least at short-term. Overreliance on the same herbicide though leads to the spread of resistant weeds. Here, the objective was to evaluate, with simulations, the impact on the advent of glyphosate resistance in weeds of modifications in agricultural practises resulting from introducing HT maize into cropping systems. First, we included a single-gene herbicide resistance submodel in the existing multispecific FLORSYS model...
March 21, 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28323903/global-potential-distribution-of-drosophila-suzukii-diptera-drosophilidae
#4
Luana A Dos Santos, Mayara F Mendes, Alexandra P Krüger, Monica L Blauth, Marco S Gottschalk, Flávio R M Garcia
Drosophila suzukii (Matsumura) is a species native to Western Asia that is able to pierce intact fruit during egg laying, causing it to be considered a fruit crop pest in many countries. Drosophila suzukii have a rapid expansion worldwide; occurrences were recorded in North America and Europe in 2008, and South America in 2013. Due to this rapid expansion, we modeled the potential distribution of this species using the Maximum Entropy Modeling (MaxEnt) algorithm and the Genetic Algorithm for Ruleset Production (GARP) using 407 sites with known occurrences worldwide and 11 predictor variables...
2017: PloS One
https://www.readbyqxmd.com/read/28323437/potato-consumption-and-risk-of-colorectal-cancer-in-the-norwegian-women-and-cancer-cohort
#5
Lene A Åsli, Anja Olsen, Tonje Braaten, Eiliv Lund, Guri Skeie
Potatoes are the fourth most plentiful food crop in the world, yet the scientific literature on the health effects of potato consumption is scarce. This study aimed to investigate the association between potato consumption and the risk of colorectal cancer (CRC) among 79,778 women aged 41-70, in the Norwegian Women and Cancer study. Information on diet, lifestyle, and health was collected by questionnaire. CRC cases (n  =  912) were identified through registry linkage. Adjusted Cox proportional hazard models were used to estimate the association between potato consumption and the risk of CRC...
March 21, 2017: Nutrition and Cancer
https://www.readbyqxmd.com/read/28319670/identification-of-candidate-genes-for-the-seed-coat-colour-change-in-a-brachypodium-distachyon-mutant-induced-by-gamma-radiation-using-whole-genome-re-sequencing
#6
Man Bo Lee, Dae Yeon Kim, Yong Weon Seo
Brachypodium distachyon has been proposed as a model plant for agriculturally important cereal crops such as wheat and barley. Seed coat colour change from brown-red to yellow was observed in a mutant line (142-3) of B. distachyon, which was induced by chronic gamma radiation. In addition, dwarf phenotypes were observed in each of the lines 142-3, 421-2, and 1376-1. In order to identify causal mutations for the seed coat colour change, the three mutant lines and the wild type were subjected to whole-genome re-sequencing...
March 20, 2017: Genome Génome / Conseil National de Recherches Canada
https://www.readbyqxmd.com/read/28317783/heat-induced-formation-of-mepiquat-by-decarboxylation-of-pipecolic-acid-and-its-betaine-derivative-part-2-natural-formation-in-cooked-vegetables-and-selected-food-products
#7
Yuan Yuan, Adrienne Tarres, Thomas Bessaire, Wilhelm Rademacher, Richard H Stadler, Thierry Delatour
Mepiquat (N,N-dimethylpiperidinium) is a plant growth regulator registered for use as its chloride salt in many countries on cereals and other crops. Recent model system studies have shown that natural chemicals present in crop plants, such as pipecolic acid and pipecolic acid betaine, may furnish mepiquat through different chemical pathways, when subjected to temperatures in the range of 200°C. In this study, we cooked raw vegetables that did not contain mepiquat to a palatable state using different traditional cooking methods, and detected mepiquat in 9 out of 11 oven-cooked vegetables, reaching up to 189μg/kg dry wt in oven-cooked broccoli...
August 1, 2017: Food Chemistry
https://www.readbyqxmd.com/read/28316108/cry1a-b-16-toxin-from-bacillus-thuringiensis-theoretical-refinement-of-three-dimensional-structure-and-prediction-of-peptides-as-molecular-markers-for-detection-of-genetically-modified-organisms
#8
Alexandra Plácido, Andreia Coelho, Lucas Abreu do Nascimento, Andreanne Gomes Vasconcelos, Maria Fátima Barroso, Joilson Ramos-Jesus, Vladimir Costa, Francisco das Chagas Alves Lima, Cristina Delerue-Matos, Ricardo Martins Ramos, Mariela M Marani, José Roberto de Souza de Almeida Leite
Transgenic maize produced by the insertion of the Cry transgene into its genome became the second most cultivated crop worldwide. Cry gene from Bacillus thuringiensis kurstaki expresses protein derivatives of crystalline endotoxins which confer insect resistance onto the maize crop. Mandatory labeling of processed food containing or made by genetically modified organisms is in force in many countries, so, it is very urgent to develop fast and practical methods for GMO identification, e.g., biosensors. In the absence of an available empirical structure of Cry1A(b)16 protein, a theoretical model was effectively generated, in this work, by homology modeling and molecular dynamics simulations based on two available homologous protein structures...
March 18, 2017: Proteins
https://www.readbyqxmd.com/read/28306716/localization-and-diagnosis-framework-for-pediatric-cataracts-based-on-slit-lamp-images-using-deep-features-of-a-convolutional-neural-network
#9
Xiyang Liu, Jiewei Jiang, Kai Zhang, Erping Long, Jiangtao Cui, Mingmin Zhu, Yingying An, Jia Zhang, Zhenzhen Liu, Zhuoling Lin, Xiaoyan Li, Jingjing Chen, Qianzhong Cao, Jing Li, Xiaohang Wu, Dongni Wang, Haotian Lin
Slit-lamp images play an essential role for diagnosis of pediatric cataracts. We present a computer vision-based framework for the automatic localization and diagnosis of slit-lamp images by identifying the lens region of interest (ROI) and employing a deep learning convolutional neural network (CNN). First, three grading degrees for slit-lamp images are proposed in conjunction with three leading ophthalmologists. The lens ROI is located in an automated manner in the original image using two successive applications of Candy detection and the Hough transform, which are cropped, resized to a fixed size and used to form pediatric cataract datasets...
2017: PloS One
https://www.readbyqxmd.com/read/28303198/impacts-of-leaf-age-and-heat-stress-duration-on-photosynthetic-gas-exchange-and-foliar-nonstructural-carbohydrates-in-coffea-arabica
#10
Danielle E Marias, Frederick C Meinzer, Christopher Still
Given future climate predictions of increased temperature, and frequency and intensity of heat waves in the tropics, suitable habitat to grow ecologically, economically, and socially valuable Coffea arabica is severely threatened. We investigated how leaf age and heat stress duration impact recovery from heat stress in C. arabica. Treated plants were heated in a growth chamber at 49°C for 45 or 90 min. Physiological recovery was monitored in situ using gas exchange, chlorophyll fluorescence (the ratio of variable to maximum fluorescence, FV/FM), and leaf nonstructural carbohydrate (NSC) on mature and expanding leaves before and 2, 15, 25, and 50 days after treatment...
February 2017: Ecology and Evolution
https://www.readbyqxmd.com/read/28303148/differentiating-wheat-genotypes-by-bayesian-hierarchical-nonlinear-mixed-modeling-of-wheat-root-density
#11
Anton P Wasson, Grace S Chiu, Alexander B Zwart, Timothy R Binns
Ensuring future food security for a growing population while climate change and urban sprawl put pressure on agricultural land will require sustainable intensification of current farming practices. For the crop breeder this means producing higher crop yields with less resources due to greater environmental stresses. While easy gains in crop yield have been made mostly "above ground," little progress has been made "below ground"; and yet it is these root system traits that can improve productivity and resistance to drought stress...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28303145/evolutionary-analyses-of-gras-transcription-factors-in-angiosperms
#12
Alberto Cenci, Mathieu Rouard
GRAS transcription factors (TFs) play critical roles in plant growth and development such as gibberellin and mycorrhizal signaling. Proteins belonging to this gene family contain a typical GRAS domain in the C-terminal sequence, whereas the N-terminal region is highly variable. Although, GRAS genes have been characterized in a number of plant species, their classification is still not completely resolved. Based on a panel of eight representative species of angiosperms, we identified 29 orthologous groups or orthogroups (OGs) for the GRAS gene family, suggesting that at least 29 ancestor genes were present in the angiosperm lineage before the "Amborella" evolutionary split...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28301564/temperature-dependent-phenology-of-plutella-xylostella-lepidoptera-plutellidae-simulation-and-visualization-of-current-and-future-distributions-along-the-eastern-afromontane
#13
Benignus V Ngowi, Henri E Z Tonnang, Evans M Mwangi, Tino Johansson, Janet Ambale, Paul N Ndegwa, Sevgan Subramanian
There is a scarcity of laboratory and field-based results showing the movement of the diamondback moth (DBM) Plutella xylostella (L.) across a spatial scale. We studied the population growth of the diamondback moth (DBM) Plutella xylostella (L.) under six constant temperatures, to understand and predict population changes along altitudinal gradients and under climate change scenarios. Non-linear functions were fitted to continuously model DBM development, mortality, longevity and oviposition. We compiled the best-fitted functions for each life stage to yield a phenology model, which we stochastically simulated to estimate the life table parameters...
2017: PloS One
https://www.readbyqxmd.com/read/28300144/fast-detection-of-tobacco-mosaic-virus-infected-tobacco-using-laser-induced-breakdown-spectroscopy
#14
Jiyu Peng, Kunlin Song, Hongyan Zhu, Wenwen Kong, Fei Liu, Tingting Shen, Yong He
Tobacco mosaic virus (TMV) is one of the most devastating viruses to crops, which can cause severe production loss and affect the quality of products. In this study, we have proposed a novel approach to discriminate TMV-infected tobacco based on laser-induced breakdown spectroscopy (LIBS). Two different kinds of tobacco samples (fresh leaves and dried leaf pellets) were collected for spectral acquisition, and partial least squared discrimination analysis (PLS-DA) was used to establish classification models based on full spectrum and observed emission lines...
March 16, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28299441/the-r2r3myb-vvmybpa1-from-grape-reprograms-the-phenylpropanoid-pathway-in-tobacco-flowers
#15
Valentina Passeri, Stefan Martens, Elisabete Carvalho, Chantal Bianchet, Francesco Damiani, Francesco Paolocci
This work shows that, in tobacco, the ectopic expression of VvMYBPA1 , a grape regulator of proanthocyanidin biosynthesis, up- or down-regulates different branches of the phenylproanoid pathway, in a structure-specific fashion. Proanthocyanidins are flavonoids of paramount importance for animal and human diet. Research interest increasingly tilts towards generating crops enriched with these health-promoting compounds. Flavonoids synthesis is regulated by the MBW transcriptional complex, made of R2R3MYB, bHLH and WD40 proteins, with the MYB components liable for channeling the complex towards specific branches of the pathway...
March 15, 2017: Planta
https://www.readbyqxmd.com/read/28298919/overestimation-of-crop-root-biomass-in-field-experiments-due-to-extraneous-organic-matter
#16
Juliane Hirte, Jens Leifeld, Samuel Abiven, Hans-Rudolf Oberholzer, Andreas Hammelehle, Jochen Mayer
Root biomass is one of the most relevant root parameters for studies of plant response to environmental change, soil carbon modeling or estimations of soil carbon sequestration. A major source of error in root biomass quantification of agricultural crops in the field is the presence of extraneous organic matter in soil: dead roots from previous crops, weed roots, incorporated above ground plant residues and organic soil amendments, or remnants of soil fauna. Using the isotopic difference between recent maize root biomass and predominantly C3-derived extraneous organic matter, we determined the proportions of maize root biomass carbon of total carbon in root samples from the Swiss long-term field trial "DOK...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28296068/assessment-of-insecticide-risk-to-human-health-in-groundwater-in-northern-china-by-using-the-china-pearl-model
#17
Yue Geng, Jing Ma, Ruize Zhou, Ran Jia, Chongjiu Li, Xiaodong Ma
BACKGROUND: Insecticides are extensively used in China and may leach to groundwater, which is used as a source of drinking water in Northern China. However, the risk of insecticide leaching to groundwater and the subsequent risk to human health caused by the consumption of insecticide-contaminated drinking water remain unclear. RESULTS: A total of 336 predicted environmental concentrations (PECs) were simulated for 32 commonly-used insecticides, and 171 PECs were calculated for 20 metabolites in 6 agricultural dry-land scenario locations of Northern China with 8 target crops...
March 15, 2017: Pest Management Science
https://www.readbyqxmd.com/read/28288112/reconstructing-the-genome-of-the-most-recent-common-ancestor-of-flowering-plants
#18
Florent Murat, Alix Armero, Caroline Pont, Christophe Klopp, Jérôme Salse
We describe here the reconstruction of the genome of the most recent common ancestor (MRCA) of modern monocots and eudicots, accounting for 95% of extant angiosperms, with its potential repertoire of 22,899 ancestral genes conserved in present-day crops. The MRCA provides a starting point for deciphering the reticulated evolutionary plasticity between species (rapidly versus slowly evolving lineages), subgenomes (pre- versus post-duplication blocks), genomic compartments (stable versus labile loci), genes (ancestral versus species-specific genes) and functions (gained versus lost ontologies), the key mutational forces driving the success of polyploidy in crops...
March 13, 2017: Nature Genetics
https://www.readbyqxmd.com/read/28288105/reduction-of-antinutritional-glucosinolates-in-brassica-oilseeds-by-mutation-of-genes-encoding-transporters
#19
Hussam Hassan Nour-Eldin, Svend Roesen Madsen, Steven Engelen, Morten Egevang Jørgensen, Carl Erik Olsen, Jonathan Sonne Andersen, David Seynnaeve, Thalia Verhoye, Rudy Fulawka, Peter Denolf, Barbara Ann Halkier
The nutritional value of Brassica seed meals is reduced by the presence of glucosinolates, which are toxic compounds involved in plant defense. Mutation of the genes encoding two glucosinolate transporters (GTRs) eliminated glucosinolates from Arabidopsis thaliana seeds, but translation of loss-of-function phenotypes into Brassica crops is challenging because Brassica is polyploid. We mutated one of seven and four of 12 GTR orthologs and reduced glucosinolate levels in seeds by 60-70% in two different Brassica species (Brassica rapa and Brassica juncea)...
March 13, 2017: Nature Biotechnology
https://www.readbyqxmd.com/read/28287500/the-evaluation-on-the-cadmium-net-concentration-for-soil-ecosystems
#20
Yu Yao, Pei-Fang Wang, Chao Wang, Jun Hou, Ling-Zhan Miao
Yixing, known as the "City of Ceramics", is facing a new dilemma: a raw material crisis. Cadmium (Cd) exists in extremely high concentrations in soil due to the considerable input of industrial wastewater into the soil ecosystem. The in situ technique of diffusive gradients in thin film (DGT), the ex situ static equilibrium approach (HAc, EDTA and CaCl2), and the dissolved concentration in soil solution, as well as microwave digestion, were applied to predict the Cd bioavailability of soil, aiming to provide a robust and accurate method for Cd bioavailability evaluation in Yixing...
March 12, 2017: International Journal of Environmental Research and Public Health
keyword
keyword
11225
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"