keyword
https://read.qxmd.com/read/38646764/construction-of-carbon-sequestration-ecological-network-in-linyi-city-based-on-supply-and-demand-of-ecosystem-service
#1
JOURNAL ARTICLE
Hua-Qiu Liang, Meng-Han Shen, Ming Shao, Peng Yao
The increasing carbon emissions is one of the important reasons for global warming. As a key area of carbon emissions, carbon sequestration capacity of cities is urgently needed to be improved. Carbon sequestration ser-vices can be transferred between supply and demand areas due to the circulation of atmosphere. With Linyi City as an example, we used the minimum cumulative resistance model to extract the matching path of supply and demand, and constructed a carbon sequestration ecological network. The results showed that the regions with high supply of carbon sequestration services were located in the north and south of the study area, and that current total supply could solve about 60% of the total demand...
March 18, 2024: Ying Yong Sheng Tai Xue Bao, the Journal of Applied Ecology
https://read.qxmd.com/read/38646733/crystal-structure-of-a-newly-identified-m61-family-aminopeptidase-with-broad-substrate-specificity-that-is-solely-responsible-for-recycling-acidic-amino-acids
#2
JOURNAL ARTICLE
Sahayog N Jamdar, Pooja Yadav, Bhushan S Kulkarni, Sudesh, Ashwani Kumar, Ravindra D Makde
Aminopeptidases with varied substrate specificities are involved in different crucial physiological processes of cellular homeostasis. They also have wide applications in food and pharma industries. Within the bacterial cell, broad specificity aminopeptidases primarily participate in the recycling of amino acids by degrading oligopeptides generated via primary proteolysis mediated by cellular ATP-dependent proteases. However, in bacteria, a truly broad specificity enzyme, which can cleave off acidic, basic, Gly and hydrophobic amino acid residues, is extremely rare...
April 22, 2024: FEBS Journal
https://read.qxmd.com/read/38646710/three-dimensional-hotspot-structures-constructed-from-nanoporous-gold-with-a-v-cavity-and-gold-nanoparticles-for-surface-enhanced-raman-scattering
#3
JOURNAL ARTICLE
Yang Xu, Yan Wu, Jianjun Wei, Yuanyu Zhao, Peili Xue
The intensity and sensitivity of surface-enhanced Raman scattering (SERS) spectra are highly dependent on the consistency and homogeneity of the nanomaterials. In this study, we developed a large-area three-dimensional (3D) hotspot substrate with good homogeneity and reproducibility in SERS signals. The substrate is based on the synergistic structures of nanoporous gold (NPG) and gold nanoparticles (AuNPs). NPG was combined with a periodic V-shaped nanocavity array to create nanoporous gold with a V-cavity (NPGVC) array featuring uniform hotspots...
April 22, 2024: Analytical Methods: Advancing Methods and Applications
https://read.qxmd.com/read/38644577/core-shell-gold-nanoparticles-pd-loaded-covalent-organic-framework-for-in-situ-surface-enhanced-raman-spectroscopy-monitoring-of-catalytic-reactions
#4
JOURNAL ARTICLE
Wen-Fei Huang, Han-Bin Xu, Shi-Cheng Zhu, Yue He, Hua-Ying Chen, Da-Wei Li
A core-shell nanostructure of gold nanoparticles@covalent organic framework (COF) loaded with palladium nanoparticles (AuNPs@COF-PdNPs) was designed for the rapid monitoring of catalytic reactions with surface-enhanced Raman spectroscopy (SERS). The nanostructure was prepared by coating the COF layer on AuNPs and then in situ synthesizing PdNPs within the COF shell. With the respective SERS activity and catalytic performance of the AuNP core and COF-PdNPs shell, the nanostructure can be directly used in the SERS study of the catalytic reaction processes...
April 21, 2024: ACS Sensors
https://read.qxmd.com/read/38643950/dysregulation-of-adipogenesis-and-disrupted-lipid-metabolism-by-the-antidepressants-citalopram-and-sertraline
#5
JOURNAL ARTICLE
Deniz Bozdag, Jeroen van Voorthuizen, Nikita Korpel, Sander Lentz, Hande Gurer-Orhan, Jorke H Kamstra
Selective Serotonin Reuptake Inhibitors (SSRIs) are widely used medications for the treatment of major depressive disorder. However, long-term SSRI use has been associated with weight gain and altered lipid profiles. These findings suggest that SSRIs may have negative effects on metabolism. Exposure to certain chemicals called 'obesogens' are known to promote lipid accumulation and obesity by modulating adipogenesis. Here, we investigated whether citalopram (CIT) and sertraline (SER) interfere with the process of adipogenesis, using human mesenchymal stem cells (MSCs) in a 2D and a 3D model...
April 19, 2024: Toxicology and Applied Pharmacology
https://read.qxmd.com/read/38642686/o-linked-glycosylations-in-human-milk-casein-and-major-whey-proteins-during-lactation
#6
JOURNAL ARTICLE
Martin Nørmark Thesbjerg, Katrine Overgaard Poulsen, Julie Astono, Nina Aagaard Poulsen, Lotte Bach Larsen, Søren Drud-Heydary Nielsen, Allan Stensballe, Ulrik Kræmer Sundekilde
As glycosylations are difficult to analyze, their roles and effects are poorly understood. Glycosylations in human milk (HM) differ across lactation. Glycosylations can be involved in antimicrobial activities and may serve as food for beneficial microorganisms. This study aimed to identify and analyze O-linked glycans in HM by high-throughput mass spectrometry. 184 longitudinal HM samples from 66 donors from day 3 and months 1, 2, and 3 postpartum were subjected to a post-translational modification specific enrichment-based strategy using TiO2 and ZrO2 beads for O-linked glycopeptide enrichment...
April 18, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38641151/biological-evaluation-of-sulfonate-and-sulfate-analogues-of-lithocholic-acid-a-bioisosterism-guided-approach-towards-the-discovery-of-potential-sialyltransferase-inhibitors-for-antimetastatic-study
#7
JOURNAL ARTICLE
Ser John Lynon P Perez, Chia-Ling Chen, Tzu-Ting Chang, Wen-Shan Li
The naturally occurring bile acid lithocholic acid (LCA) has been a crucial core structure for many non-sugar-containing sialyltranferase (ST) inhibitors documented in literature. With the aim of elucidating the impact of the terminal carboxyl acid substituent of LCA on its ST inhibition, in this present study, we report the (bio)isosteric replacement-based design and synthesis of sulfonate and sulfate analogues of LCA. Among these compounds, the sulfate analogue SPP-002 was found to selectively inhibit N-glycan sialylation by at least an order of magnitude, indicating a substantial improvement in both potency and selectivity when compared to the unmodified parent bile acid...
April 17, 2024: Bioorganic & Medicinal Chemistry Letters
https://read.qxmd.com/read/38640628/sle-diagnosis-research-based-on-sers-combined-with-a-multi-modal-fusion-method
#8
JOURNAL ARTICLE
Yuhao Huang, Chen Chen, Chenjie Chang, Zhiyuan Cheng, Yang Liu, Xuehua Wang, Cheng Chen, Xiaoyi Lv
As artificial intelligence technology gains widespread adoption in biomedicine, the exploration of integrating biofluidic Raman spectroscopy for enhanced disease diagnosis opens up new prospects for the practical application of Raman spectroscopy in clinical settings. However, for systemic lupus erythematosus (SLE), origin Raman spectral data (ORS) have relatively weak signals, making it challenging to obtain ideal classification results. Although the surface enhancement technique can enhance the scattering signal of Raman spectroscopic data, the sensitivity of the SERS substrate to airborne impurities and the inhomogeneous distribution of hotspots degrade part of the signal...
April 15, 2024: Spectrochimica Acta. Part A, Molecular and Biomolecular Spectroscopy
https://read.qxmd.com/read/38640626/flexible-scalable-and-simple-fabricated-silver-nanorod-decorated-bacterial-nanocellulose-sers-substrates-cooperated-with-portable-raman-spectrometer-for-on-site-detection-of-pesticide-residues
#9
JOURNAL ARTICLE
Sihang Zhang, Jiechen Xu, Ming He, Zhichang Sun, Yao Li, Lei Ding, Long Wu, Xing Liu, Zoufei Du, Shouxiang Jiang
Owing to good flexibility, prominent mechanical properties, three-dimensional (3D) nanofibrous structure and low background interference, sustainable bacterial nanocellulose (BNC) is a highly attractive matrix material for surface-enhanced Raman scattering (SERS) sensor. Herein, a highly sensitive, flexible and scalable silver nanorod-decorated BNC (AgNRs@BNC) SERS sensor is developed by a simple vacuum-assisted filtration. The AgNRs were firmly locked in the 3D nanofibrous network of cellulose nanofibers upon vacuum drying process, resulting in the formation of 3D SERS hotspots with a depth of more than 10 μm on the sensor...
April 16, 2024: Spectrochimica Acta. Part A, Molecular and Biomolecular Spectroscopy
https://read.qxmd.com/read/38639023/surface-enhanced-raman-scattering-sensors-employing-a-nanoparticle-on-liquid-mirror-npolm-architecture
#10
JOURNAL ARTICLE
Shreyan Datta, Shoaib Vasini, Xianglong Miao, Peter Q Liu
Surface-enhanced Raman scattering (SERS) sensors typically employ nanophotonic structures that support high-field confinement and enhancement in hotspots to increase the Raman scattering from target molecules by orders of magnitude. In general, high field and SERS enhancement can be achieved by reducing the critical dimensions and mode volumes of the hotspots to nanoscale. To this end, a multitude of SERS sensors employing photonic structures with nanometric hotspots have been demonstrated. However, delivering analyte molecules into nanometric hotspots is challenging, and the trade-off between field confinement/enhancement and analyte delivery efficiency is a critical limiting factor for the performance of many nanophotonic SERS sensors...
April 19, 2024: Small Methods
https://read.qxmd.com/read/38638878/probing-the-active-site-of-class-3-l-asparaginase-by-mutagenesis-i-tinkering-with-the-zinc-coordination-site-of-reav
#11
JOURNAL ARTICLE
Kinga Pokrywka, Marta Grzechowiak, Joanna Sliwiak, Paulina Worsztynowicz, Joanna I Loch, Milosz Ruszkowski, Miroslaw Gilski, Mariusz Jaskolski
ReAV, the inducible Class-3 L-asparaginase from the nitrogen-fixing symbiotic bacterium Rhizobium etli , is an interesting candidate for optimizing its enzymatic potential for antileukemic applications. Since it has no structural similarity to known enzymes with this activity, it may offer completely new ways of approach. Also, as an unrelated protein, it would evade the immunological response elicited by other asparaginases. The crystal structure of ReAV revealed a uniquely assembled protein homodimer with a highly specific C135/K138/C189 zinc binding site in each subunit...
2024: Frontiers in Chemistry
https://read.qxmd.com/read/38637410/structure-and-biological-activity-in-vitro-of-flagellin-and-its-mutants-from-escherichia-coli-nissle-1917
#12
JOURNAL ARTICLE
Shuang Li, Ming Wen, Guilan Wen, Ying Yang
Bacterial flagellin is a potent immunomodulatory agent. Previously, we successfully obtained flagellin from Escherichia coli Nissle 1917 (FliCEcN ) and constructed two mutants with varying degrees of deletion in its highly variable regions (HVRs). We found that there was a difference in immune stimulation levels between the two mutants, with the mutant lacking the D2-D3 domain pair of FliCEcN having a better adjuvant effect. Therefore, this study further analyzed the structural characteristics of the aforementioned FliCEcN and its two mutants and measured their levels of Caco-2 cell stimulation to explore the impact of different domains in the HVRs of FliCEcN on its structure and immune efficacy...
April 18, 2024: Archives of Microbiology
https://read.qxmd.com/read/38637091/enterotoxigenic-staphylococcus-aureus-in-brazilian-artisanal-cheeses-occurrence-counts-phenotypic-and-genotypic-profiles
#13
JOURNAL ARTICLE
Larissa P Margalho, Juliana S Graça, Bruna A Kamimura, Sarah H I Lee, Héctor D S Canales, Alexandra I A Chincha, Magdevis Y R Caturla, Ramon P Brexó, Aline Crucello, Verônica O Alvarenga, Adriano G Cruz, Carlos Augusto F Oliveira, Anderson S Sant'Ana
The present study aimed to assess the occurrence and counts of Staphylococcus aureus in Brazilian artisanal cheeses (BAC) produced in five regions of Brazil: Coalho and Manteiga (Northeast region); Colonial and Serrano (South); Caipira (Central-West); Marajó (North); and Minas Artisanal cheeses, from Araxá, Campos das Vertentes, Cerrado, Serro and Canastra microregions (Southeast). The resistance to chlorine-based sanitizers, ability to attach to stainless steel surfaces, and antibiogram profile of a large set of S...
August 2024: Food Microbiology
https://read.qxmd.com/read/38637053/colorimetric-and-sers-dual-mode-detection-of-gsh-in-human-serum-based-on-aunps-cu-porphyrin-mof-nanozyme
#14
JOURNAL ARTICLE
Kexi Sun, Chao Liu, Yi Cao, Jianxia Zhu, Jialin Li, Qing Huang
BACKGROUND: Rapid and accurate detection of glutathione content in human blood plays an important role in real-time tracking of related diseases. Currently, surface-enhanced Raman scattering/spectroscopy (SERS) combined with nanozyme material has been proven to have excellent properties in the detection applications compared to many other methods because of it combines the advantages of trace detection capability of SERS and efficient catalytic activity of nanozymes. However, there are still existing problems in real sample detection, and to achieve quantitative detection is still challenging...
May 22, 2024: Analytica Chimica Acta
https://read.qxmd.com/read/38637045/low-abundance-proteins-based-label-free-sers-approach-for-high-precision-detection-of-liver-cancer-with-different-stages
#15
JOURNAL ARTICLE
Tong Sun, Yamin Lin, Yun Yu, Siqi Gao, Xingen Gao, Hongyi Zhang, Kecan Lin, Juqiang Lin
BACKGROUND: Surface-enhanced Raman scattering (SERS) technology have unique advantages of rapid, simple, and highly sensitive in the detection of serum, it can be used for the detection of liver cancer. However, some protein biomarkers in body fluids are often present at ultra-low concentrations and severely interfered with by the high-abundance proteins (HAPs), which will affect the detection of specificity and accuracy in cancer screening based on the SERS immunoassay. Clearly, there is a need for an unlabeled SERS method based on low abundance proteins, which is rapid, noninvasive, and capable of high precision detection and screening of liver cancer...
May 22, 2024: Analytica Chimica Acta
https://read.qxmd.com/read/38636148/evaluation-of-exogenous-phytase-in-high-phytate-diets-for-broiler-chickens-and-pigs
#16
JOURNAL ARTICLE
T L Wise, V S Haetinger, E O Alagbe, J O B Sorbara, O Adeola
There is a gap in the understanding of the relationship between dietary phytate levels and the relative efficacy of phytase to improve amino acid (AA) digestibility in pigs and chickens. Two experiments were conducted to investigate the effect of exogenous phytase on standardized ileal digestibility (SID) of AA and the apparent ileal digestibility (AID) of P in both standard- (SP) and high-phytate (HP) diets for broilers and swine. There were either 40 cages of Cobb 500 male broilers or 10 crossbred barrows (35 kg) fitted with ileal T-cannulas...
March 21, 2024: Animal
https://read.qxmd.com/read/38634687/serum-gfap-levels-correlate-with-astrocyte-reactivity-post-mortem-brain-atrophy-and-neurofibrillary-tangles
#17
JOURNAL ARTICLE
Pascual Sánchez-Juan, Elizabeth Valeriano-Lorenzo, Alicia Ruiz-González, Ana Belén Pastor, Hector Rodrigo Lara, Francisco López-González, María Ascensión Zea-Sevilla, Meritxell Valentí, Belen Frades, Paloma Ruiz, Laura Saiz, Iván Burgueño-García, Miguel Calero, Teodoro Del Ser, Alberto Rábano
Glial fibrillary acidic protein (GFAP), a proxy of astrocyte reactivity, has been proposed as biomarker of Alzheimer's disease. However, there is limited information about the correlation between blood biomarkers and post-mortem neuropathology. In a single-centre prospective clinicopathological cohort of 139 dementia patients, for which the time-frame between GFAP level determination and neuropathological assessment was exceptionally short (on average 139 days), we analysed this biomarker, measured at three time points, in relation to proxies of disease progression such as cognitive decline and brain weight...
April 18, 2024: Brain
https://read.qxmd.com/read/38634156/differentiating-structurally-similar-fentanyl-analogs-by-comparing-density-functional-theory-dft-calculations-and-surface-enhanced-raman-spectroscopy-sers-results
#18
JOURNAL ARTICLE
Sevde Dogruer Erkok, Emily Hernandez, Jordi Cruz, Alexander M Mebel, Bruce McCord
Fentanyl and fentanyl analogs are the main cause of recent overdose deaths in the United States. The presence of fentanyl analogs in illicit drugs makes it difficult to estimate their potencies. This makes the detection and differentiation of fentanyl analogs critically significant. Surface-enhanced Raman spectroscopy (SERS) can differentiate structurally similar fentanyl analogs by yielding spectroscopic fingerprints for the detected molecules. In previous years, five fentanyl analogs, carfentanil, furanyl fentanyl, acetyl fentanyl, 4-fluoroisobutyryl fentanyl (4-FIBF), and cyclopropyl fentanyl (CPrF), gained popularity and were found in 76...
April 18, 2024: Applied Spectroscopy
https://read.qxmd.com/read/38633091/plasmonic-nano-bowls-for-monitoring-intra-membrane-changes-in-liposomes-and-dna-based-nanocarriers-in-suspension
#19
JOURNAL ARTICLE
Sathi Das, Jean-Claude Tinguely, Sybil Akua Okyerewa Obuobi, Nataša Škalko-Basnet, Kanchan Saxena, Balpreet Singh Ahluwalia, Dalip Singh Mehta
Programmable nanoscale carriers, such as liposomes and DNA, are readily being explored for personalized medicine or disease prediction and diagnostics. The characterization of these nanocarriers is limited and challenging due to their complex chemical composition. Here, we demonstrate the utilization of surface-enhanced Raman spectroscopy (SERS), which provides a unique molecular fingerprint of the analytes while reducing the detection limit. In this paper, we utilize a silver coated nano-bowl shaped polydimethylsiloxane (PDMS) SERS substrate...
April 1, 2024: Biomedical Optics Express
https://read.qxmd.com/read/38632933/a-scaffold-assisted-3d-cancer-cell-model-for-surface-enhanced-raman-scattering-based-real-time-sensing-and-imaging
#20
JOURNAL ARTICLE
Clara García-Astrain, Malou Henriksen-Lacey, Elisa Lenzi, Carlos Renero-Lecuna, Judith Langer, Paula Piñeiro, Beatriz Molina-Martínez, Javier Plou, Dorleta Jimenez de Aberasturi, Luis M Liz-Marzán
Despite recent advances in the development of scaffold-based three-dimensional (3D) cell models, challenges persist in imaging and monitoring cell behavior within these complex structures due to their heterogeneous cell distribution and geometries. Incorporating sensors into 3D scaffolds provides a potential solution for real-time, in situ sensing and imaging of biological processes such as cell growth and disease development. We introduce a 3D printed hydrogel-based scaffold capable of supporting both surface-enhanced Raman scattering (SERS) biosensing and imaging of 3D breast cancer cell models...
April 17, 2024: ACS Nano
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