keyword
https://read.qxmd.com/read/38729622/development-of-peptide-displacement-assays-to-screen-for-antagonists-of-ddb1-interactions
#1
JOURNAL ARTICLE
Darren Yong, Shabbir Ahmad, Mark F Mabanglo, Levon Halabelian, Matthieu Schapira, Suzanne Ackloo, Sumera Perveen, Pegah Ghiabi, Masoud Vedadi
The DNA damage binding protein 1 (DDB1) is an essential component of protein complexes involved in DNA damage repair and the ubiquitin-proteasome system (UPS) for protein degradation. As an adaptor protein specific to Cullin-RING E3 ligases, DDB1 binds different receptors that poise protein substrates for ubiquitination and subsequent degradation by the 26S proteasome. Examples of DDB1-binding protein receptors are Cereblon (CRBN) and the WD-repeat containing <u>D</u>DB1- and <u>C</u>UL4-<u>a</u>ssociated <u>f</u>actors (DCAFs)...
May 10, 2024: Biochemistry
https://read.qxmd.com/read/38728194/role-of-mek1-and-diaph3-expression-in-colorectal-adenoma-carcinoma-sequence
#2
JOURNAL ARTICLE
Abd AlRahman Mohammad Foda, Amira Kamal El-Hawary, Khaled Elnaghi, Wesal M Eldehna, Eman T Enan
BACKGROUND: It is well established that most colorectal carcinomas arise from conventional adenomas through the adenoma-carcinoma sequence (ACS) model. mitogen-activated protein kinases (MAPKs) pathway has been reported as a crucial player in tumorigenesis. The MAPK signaling pathway is activated by different extracellular signals involving the "mitogen-activated/extracellular signal-regulated kinase 1 (MEK1)", and this induces the expression of genes involved in proliferation and cellular transformation...
2024: Tumour Biology: the Journal of the International Society for Oncodevelopmental Biology and Medicine
https://read.qxmd.com/read/38725855/taz-deficiency-impairs-the-autophagy-lysosomal-pathway-through-nrf2-dysregulation-and-lysosomal-dysfunction
#3
JOURNAL ARTICLE
Hyo Kyeong Kim, Hana Jeong, Mi Gyeong Jeong, Hee Yeon Won, Gibbeum Lee, Soo Han Bae, Miso Nam, Sung Hoon Lee, Geum-Sook Hwang, Eun Sook Hwang
Transcriptional coactivator with a PDZ-binding motif (TAZ) plays a key role in normal tissue homeostasis and tumorigenesis through interaction with several transcription factors. In particular, TAZ deficiency causes abnormal alveolarization and emphysema, and persistent TAZ overexpression contributes to lung cancer and pulmonary fibrosis, suggesting the possibility of a complex mechanism of TAZ function. Recent studies suggest that nuclear factor erythroid 2-related factor 2 (NRF2), an antioxidant defense system, induces TAZ expression during tumorigenesis and that TAZ also activates the NRF2-mediated antioxidant pathway...
2024: International Journal of Biological Sciences
https://read.qxmd.com/read/38724689/bin1-regulates-actin-membrane-interactions-during-irsp53-dependent-filopodia-formation
#4
JOURNAL ARTICLE
Laura Picas, Charlotte André-Arpin, Franck Comunale, Hugo Bousquet, Feng-Ching Tsai, Félix Rico, Paolo Maiuri, Julien Pernier, Stéphane Bodin, Anne-Sophie Nicot, Jocelyn Laporte, Patricia Bassereau, Bruno Goud, Cécile Gauthier-Rouvière, Stéphanie Miserey
Amphiphysin 2 (BIN1) is a membrane and actin remodeling protein mutated in congenital and adult centronuclear myopathies. Here, we report an unexpected function of this N-BAR domain protein BIN1 in filopodia formation. We demonstrated that BIN1 expression is necessary and sufficient to induce filopodia formation. BIN1 is present at the base of forming filopodia and all along filopodia, where it colocalizes with F-actin. We identify that BIN1-mediated filopodia formation requires IRSp53, which allows its localization at negatively-curved membrane topologies...
May 9, 2024: Communications Biology
https://read.qxmd.com/read/38724488/pm-2-5-regulates-the-progression-of-lung-adenocarcinoma-through-the-axis-of-hcg18-mir-195-and-atg14
#5
JOURNAL ARTICLE
Feng Luo, Yinghui Wu, Yao Li, Huaiyang Xu, Lei Wang, Lianyong Jiang, Hongtao Liu
Relevant studies have indicated the association of HCG18 with tumour occurrence and progression. In this study, we observed that PM2.5 can enhance the growth of lung adenocarcinoma cells by modulating the expression of HCG18. Further investigations, including overexpression and knockout experiments, elucidated that HCG18 suppresses miR-195, which in turn upregulates the expression of ATG14, resulting in the upregulation of autophagy. Consequently, exposure to PM2.5 leads to elevated HCG18 expression in lung tissues, which in turn increases Atg14 expression and activates autophagy pathways through inhibition of miR-195, thereby contributing to oncogenesis...
June 2024: Clinical and Experimental Pharmacology & Physiology
https://read.qxmd.com/read/38722918/lrk-1-lrrk2-and-ap-3-regulate-trafficking-of-synaptic-vesicle-precursors-through-active-zone-protein-syd-2-liprin-%C3%AE
#6
JOURNAL ARTICLE
Sravanthi S P Nadiminti, Shirley B Dixit, Neena Ratnakaran, Anushka Deb, Sneha Hegde, Sri Padma Priya Boyanapalli, Sierra Swords, Barth D Grant, Sandhya P Koushika
Synaptic vesicle proteins (SVps) are transported by the motor UNC-104/KIF1A. We show that SVps travel in heterogeneous carriers in C. elegans neuronal processes, with some SVp carriers co-transporting lysosomal proteins (SV-lysosomes). LRK-1/LRRK2 and the clathrin adaptor protein complex AP-3 play a critical role in the sorting of SVps and lysosomal proteins away from each other at the SV-lysosomal intermediate trafficking compartment. Both SVp carriers lacking lysosomal proteins and SV-lysosomes are dependent on the motor UNC-104/KIF1A for their transport...
May 2024: PLoS Genetics
https://read.qxmd.com/read/38722788/the-neglected-sibling-nlrp2-inflammasome-in-the-nervous-system
#7
REVIEW
László Ducza, Botond Gaál
While classical NOD-like receptor pyrin domain containing protein 1 (NLRP1) and NLRP3 inflammasomal proteins have been extensively investigated, the contribution of NLRP2 is still ill-defined in the nervous system. Given the putative significance of NLRP2 in orchestrating neuroinflammation, further inquiry is needed to gain a better understanding of its connectome, hence its specific targeting may hold a promising therapeutic implication. Therefore, bioinformatical approach for extracting information, specifically in the context of neuropathologies, is also undoubtedly preferred...
May 7, 2024: Aging and Disease
https://read.qxmd.com/read/38722555/bioinformatics-analysis-of-hub-genes-in-craniofacial-microsomia-combined-with-congenital-heart-disease
#8
JOURNAL ARTICLE
Zhifeng Li, Zhenzhen Sun, Shanbaga Zhao, Tianying Zang, Zhiyong Zhang, Xiaojun Tang
OBJECTIVE: The primary objective of this study was to investigate potential mechanisms and explore hub genes of craniofacial microsomia (CFM) patients associated with congenital heart defects (CHD). METHODS: Initially, the authors acquired target gene data related to CFM and congenital cardiac anomalies. Subsequently, the authors established a protein-protein interaction (PPI) network. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses and molecular complex detection were conducted using Metascape...
May 9, 2024: Journal of Craniofacial Surgery
https://read.qxmd.com/read/38719016/ring-finger-protein-122-like-rnf122l-negatively-regulates-antiviral-immune-response-by-targeting-sting-in-common-carp-cyprinus-carpio-l
#9
JOURNAL ARTICLE
Rongrong Liu, Fei Meng, Tingting Liu, Guiwen Yang, Shijuan Shan
Stimulator of interferon genes (STING), as an imperative adaptor protein in innate immune, responds to nucleic acid from invading pathogens to build antiviral responses in host cells. Aberrant activation of STING may trigger tissue damage and autoimmune diseases. Given the decisive role in initiating innate immune response, the activity of STING is intricately governed by several posttranslational modifications, including phosphorylation and ubiquitination. Here, we cloned and characterized a novel RNF122 homolog from common carp (named CcRNF122L)...
May 6, 2024: International Journal of Biological Macromolecules
https://read.qxmd.com/read/38718206/paxillin-regulates-androgen-receptor-expression-associated-with-granulosa-cell-focal-adhesions
#10
JOURNAL ARTICLE
Adelaide E Weidner, Anna Roy, Kenji Vann, Ariana C Walczyk, Olga Astapova
Paxillin is a ubiquitously expressed adaptor protein integral to focal adhesions, cell motility, and apoptosis. Paxillin has also recently been implicated as a mediator of nongenomic androgen receptor (AR) signaling in prostate cancer and other cells. We sought to investigate the relationship between paxillin and AR in granulosa cells (GCs), where androgen actions, apoptosis, and focal adhesions are of known importance, but where the role of paxillin is understudied. We recently showed that paxillin knockout in mouse GCs increases fertility in older mice...
May 8, 2024: Molecular Human Reproduction
https://read.qxmd.com/read/38718108/endocytosis-blocks-the-vesicular-secretion-of-exosome-marker-proteins
#11
JOURNAL ARTICLE
Yiwei Ai, Chenxu Guo, Marta Garcia-Contreras, Laura S Sánchez B, Andras Saftics, Oluwapelumi Shodubi, Shankar Raghunandan, Junhao Xu, Shang Jui Tsai, Yi Dong, Rong Li, Tijana Jovanovic-Talisman, Stephen J Gould
Exosomes are secreted vesicles of ~30 to 150 nm diameter that play important roles in human health and disease. To better understand how cells release these vesicles, we examined the biogenesis of the most highly enriched human exosome marker proteins, the exosomal tetraspanins CD81, CD9, and CD63. We show here that endocytosis inhibits their vesicular secretion and, in the case of CD9 and CD81, triggers their destruction. Furthermore, we show that syntenin, a previously described exosome biogenesis factor, drives the vesicular secretion of CD63 by blocking CD63 endocytosis and that other endocytosis inhibitors also induce the plasma membrane accumulation and vesicular secretion of CD63...
May 10, 2024: Science Advances
https://read.qxmd.com/read/38717900/sh3ps-recruit-auxilin-like-vesicle-uncoating-factors-for-clathrin-mediated-endocytosis
#12
JOURNAL ARTICLE
Maciek Adamowski, Marek Randuch, Ivana Matijević, Madhumitha Narasimhan, Jiří Friml
Clathrin-mediated endocytosis (CME) is an essential process of cargo uptake operating in all eukaryotes. In animals and yeast, BAR-SH3 domain proteins, endophilins and amphiphysins, function at the conclusion of CME to recruit factors for vesicle scission and uncoating. Arabidopsis thaliana contains the BAR-SH3 domain proteins SH3P1-SH3P3, but their role is poorly understood. Here, we identify SH3Ps as functional homologs of endophilin/amphiphysin. SH3P1-SH3P3 bind to discrete foci at the plasma membrane (PM), and SH3P2 recruits late to a subset of clathrin-coated pits...
May 7, 2024: Cell Reports
https://read.qxmd.com/read/38717859/dynamics-of-membrane-tubulation-coupled-with-fission-by-a-two-component-module
#13
JOURNAL ARTICLE
Soumya Bhattacharyya, Thomas J Pucadyil
Membrane tubulation coupled with fission (MTCF) is a widespread phenomenon but mechanisms for their coordination remain unclear, partly because of the lack of assays to monitor dynamics of membrane tubulation and subsequent fission. Using polymer cushioned bilayer islands, we analyze the membrane tubulator Bridging Integrator 1 (BIN1) mixed with the fission catalyst dynamin2 (Dyn2). Our results reveal this mixture to constitute a minimal two-component module that demonstrates MTCF. MTCF is an emergent property and arises because BIN1 facilitates recruitment but inhibits membrane binding of Dyn2 in a dose-dependent manner...
May 14, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38716504/grape-seed-derived-procyanidins-decreases-neuropathic-pain-and-nerve-regeneration-by-suppression-of-tlr4-myd88-signaling
#14
JOURNAL ARTICLE
Li Hu, Erdan An, Zhipeng Zhu, Ying Cai, Xiaoyan Ye, Hongmei Zhou, Hejia Ge
BACKGROUND: Recent studies have shown that peripheral nerve regeneration process is closely related to neuropathic pain. Toll-like receptor 4 (TLR4) signaling was involved in different types of pain and nerve regeneration. TLR4 induced the recruitment of myeloid differentiation factor-88 adaptor protein (MyD88) and NF-κB-depended transcriptional process in sensory neurons and glial cells, which produced multiple cytokines and promoted the induction and persistence of pain. Our study aimed to investigate procyanidins's effect on pain and nerve regeneration via TLR4-Myd88 signaling...
May 8, 2024: Molecular Pain
https://read.qxmd.com/read/38715616/transcription-of-nod1-and-nod2-and-their-interaction-with-card9-and-ripk2-in-ifn-signaling-in-a-perciform-fish-the-chinese-perch-siniperca-chuatsi
#15
JOURNAL ARTICLE
Xue Yun Peng, Kai Lun Wang, Li Li, Bo Li, Xiang Yang Wu, Zhi Wei Zhang, Nan Li, Lan Hao Liu, P Nie, Shan Nan Chen
NOD1 and NOD2 as two representative members of nucleotide-binding oligomerization domain (NOD)-like receptor (NLR) family play important roles in antimicrobial immunity. However, transcription mechanism of nod1 and nod2 and their signal circle are less understood in teleost fish. In this study, with the cloning of card9 and ripk2 in Chinese perch, the interaction between NOD1, NOD2, and CARD9 and RIPK2 were revealed through coimmunoprecipitation and immunofluorescence assays. The overexpression of NOD1, NOD2, RIPK2 and CARD9 induced significantly the promoter activity of NF-κB, IFNh and IFNc...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38714933/a-novel-entity-of-hipk2-yap1-pulmonary-fibromatosis
#16
JOURNAL ARTICLE
Yuqiang Liu, Meng Liang, Kai Chen, Lucas Wang, Yaxian Yang, Qi Li, Bin Lian, Tongxu Zhuo, Jian Huang
BACKGROUND: Pulmonary fibromatosis (PF) is a specific variant of fibromatosis, which is rarely reported occurring in the lung. PF with HIPK2-YAP1 fusion was a novel entity. CASE PRESENTATION: In this report, a 66-year-old male with PF had been smoking over 40 years. Multiple cords and small nodules in both lungs had been detected in a health examination two years earlier at our hospital. But approximately twofold enlarged in the lingual segment of the upper lobe in the left lung were disclosed in this year...
May 7, 2024: BMC Pulmonary Medicine
https://read.qxmd.com/read/38713511/sclerostin-blockade-inhibits-bone-resorption-through-pdgf-receptor-signaling-in-osteoblast-lineage-cells
#17
JOURNAL ARTICLE
Cyril Thouverey, Pierre Apostolides, Julia Brun, Joseph Caverzasio, Serge Ferrari
While sclerostin-neutralizing antibodies (Scl-Abs) transiently stimulate bone formation by activating Wnt signaling in osteoblast lineage cells, they exert sustained inhibition of bone resorption, suggesting an alternate signaling pathway by which Scl-Abs control osteoclast activity. Since sclerostin can activate platelet-derived growth factor receptors (PDGFRs) in osteoblast lineage cells in vitro and PDGFR signaling in these cells induces bone resorption through M-CSF secretion, we hypothesized that the prolonged anticatabolic effect of Scl-Abs could result from PDGFR inhibition...
May 22, 2024: JCI Insight
https://read.qxmd.com/read/38712149/intersectin1-promotes-clathrin-mediated-endocytosis-by-organizing-and-stabilizing-endocytic-protein-interaction-networks
#18
Meiyan Jin, Yuichiro Iwamoto, Cyna Shirazinejad, David G Drubin
During clathrin-mediated endocytosis (CME), dozens of proteins are recruited to nascent CME sites on the plasma membrane. Coordination of endocytic protein recruitment in time and space is important for efficient CME. Here, we show that the multivalent scaffold protein intersectin1 (ITSN1) promotes CME by organizing and stabilizing endocytic protein interaction networks. By live-cell imaging of genome-edited cells, we observed that endogenously labeled ITSN1 is recruited to CME sites shortly after they begin to assemble...
April 22, 2024: bioRxiv
https://read.qxmd.com/read/38711986/evaluating-the-correlation-of-sclerostin-levels-with-obesity-and-type-2-diabetes-in-a-multiethnic-population-living-in-kuwait
#19
JOURNAL ARTICLE
Tahani Alramah, Preethi Cherian, Irina Al-Khairi, Mohamed Abu-Farha, Thangavel Alphonse Thanaraj, Ahmed N Albatineh, Fayez Safadi, Hamad Ali, Muhammad Abdul-Ghani, Jaakko Tuomilehto, Heikki A Koistinen, Fahd Al-Mulla, Jehad Abubaker
Obesity and Type 2 Diabetes Mellitus (T2DM) are intricate metabolic disorders with a multifactorial etiology, often leading to a spectrum of complications. Recent research has highlighted the impact of these conditions on bone health, with a particular focus on the role of sclerostin (SOST), a protein molecule integral to bone metabolism. Elevated circulating levels of SOST have been observed in patients with T2DM compared to healthy individuals. This study aims to examine the circulating levels of SOST in a multiethnic population living in Kuwait and to elucidate the relationship between SOST levels, obesity, T2DM, and ethnic background...
2024: Frontiers in Endocrinology
https://read.qxmd.com/read/38711082/dcaf1-interacts-with-pard3-to-promote-hepatocellular-carcinoma-progression-and-metastasis-by-activating-the-akt-signaling-pathway
#20
JOURNAL ARTICLE
Jinyao Zhang, Yuze Shi, Ke Ding, Weiwei Yu, Jianbo He, Beicheng Sun
BACKGROUND: Hepatocellular carcinoma (HCC) is a fatal malignancy with poor prognosis due to lack of effective clinical interference. DCAF1 plays a vital role in regulating cell growth and proliferation, and is involved in the progression of various malignancies. However, the function of DCAF1 in HCC development and the underlying mechanism are still unknown. This study aimed to explore the effect of DCAF1 in HCC and the corresponding molecular mechanism. METHODS: Quantitative real-time PCR, Western blot and immunostaining were used to determine DCAF1 expression in tumor tissues and cell lines...
May 6, 2024: Journal of Experimental & Clinical Cancer Research: CR
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