keyword
https://read.qxmd.com/read/38652739/the-scaffolding-protein-akap12-regulates-mrna-localization-and-translation
#1
JOURNAL ARTICLE
Madeleine R Smith, Parisa Naeli, Seyed M Jafarnejad, Guilherme Costa
Regulation of subcellular messenger (m)RNA localization is a fundamental biological mechanism, which adds a spatial dimension to the diverse layers of post-transcriptional control of gene expression. The cellular compartment in which mRNAs are located may define distinct aspects of the encoded proteins, ranging from production rate and complex formation to localized activity. Despite the detailed roles of localized mRNAs that have emerged over the past decades, the identity of factors anchoring mRNAs to subcellular domains remains ill-defined...
April 30, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38652706/from-the-archives-on-dna-maintenance-swi-snf-chromatin-remodeling-complexes-dna-damage-repair-and-transposon-excision-repair-mechanisms
#2
JOURNAL ARTICLE
https://read.qxmd.com/read/38652652/downregulation-of-glis3-in-ins1-cells-exposed-to-chronically-elevated-glucose-contributes-to-glucotoxicity-associated-%C3%AE-cell-dysfunction
#3
JOURNAL ARTICLE
LilyAnne M Grieve, Abhya Rani, Gary T ZeRuth
Chronically elevated levels of glucose are deleterious to pancreatic β cells and contribute to β cell dysfunction, which is characterized by decreased insulin production and a loss of β cell identity. The Krüppel-like transcription factor, Glis3 has previously been shown to positively regulate insulin transcription and mutations within the Glis3 locus have been associated with the development of several pathologies including type 2 diabetes mellitus. In this report, we show that Glis3 is significantly downregulated at the transcriptional level in INS1 832/13 cells within hours of being subjected to high glucose concentrations and that diminished expression of Glis3 is at least partly attributable to increased oxidative stress...
December 31, 2024: Islets
https://read.qxmd.com/read/38652549/oncogene-induced-matrix-reorganization-controls-cd8-t-cell-function-in-the-soft-tissue-sarcoma-microenvironment
#4
JOURNAL ARTICLE
Ashley M Fuller, Hawley C Pruitt, Ying Liu, Valerie M Irizarry-Negron, Hehai Pan, Hoogeun Song, Ann DeVine, Rohan S Katti, Samir Devalaraja, Gabrielle E Ciotti, Michael V Gonzalez, Erik F Williams, Ileana Murazzi, Dimitris Ntekoumes, Nicolas Skuli, Hakon Hakonarson, Daniel J Zabransky, Jose G Trevino, Ashani Weeraratna, Kristy Weber, Malay Haldar, Joseph A Fraietta, Sharon Gerecht, T S Karin Eisinger-Mathason
CD8+ T cell dysfunction impedes anti-tumor immunity in solid cancers but the underlying mechanisms are diverse and poorly understood. Extracellular matrix (ECM) composition has been linked to impaired T cell migration and enhanced tumor progression; however, impacts of individual ECM molecules on T cell function in the tumor microenvironment (TME) are only beginning to be elucidated. Upstream regulators of aberrant ECM deposition and organization in solid tumors are equally ill-defined. Therefore, we investigated how ECM composition modulates CD8+ T cell function in undifferentiated pleomorphic sarcoma (UPS), an immunologically active desmoplastic tumor...
April 23, 2024: Journal of Clinical Investigation
https://read.qxmd.com/read/38652545/spatiotemporal-landscape-of-kidney-tubular-responses-to-glomerular-proteinuria
#5
JOURNAL ARTICLE
Anna Faivre, Milica Bugarski, Anna Rinaldi, Imene B Sakhi, Thomas Verissimo, David Legouis, Sara Correia, Monika Kaminska, Delal Dalga, Daniele Malpetti, Pietro E Cippa, Sophie de Seigneux, Andrew M Hall
BACKGROUND: Large increases in glomerular protein filtration induce major changes in body homeostasis and increase risk of kidney functional decline and cardiovascular disease. We investigated how elevated protein exposure modifies the landscape of tubular function along the entire nephron, to understand the cellular changes that mediate these important clinical phenomena. METHODS: We conducted single nuclei RNA sequencing, functional intravital imaging, and antibody staining to spatially map transport processes along the mouse kidney tubule...
April 24, 2024: Journal of the American Society of Nephrology: JASN
https://read.qxmd.com/read/38652543/endothelial-hif%C3%AE-pdgf-b-to-smooth-muscle-beclin1-signaling-sustains-pathological-muscularization-in-pulmonary-hypertension
#6
JOURNAL ARTICLE
Fatima Z Saddouk, Andrew P Kuzemczak, Junichi Saito, Daniel M Greif
Mechanisms underlying maintenance of pathological vascular hypermuscularization are poorly delineated. Herein, we investigated retention of smooth muscle cells (SMCs) coating normally unmuscularized distal pulmonary arterioles in pulmonary hypertension (PH) mediated by chronic hypoxia ± Sugen 5416, and reversal of this pathology. With hypoxia in mice or culture, lung endothelial cells (ECs) upregulated hypoxia-inducible factor (Hif)-1a and 2a which induce platelet-derived growth factor-B (PDGF-B), and these factors reduced to normoxic levels with re-normoxia...
April 23, 2024: JCI Insight
https://read.qxmd.com/read/38652537/nkx2-5-regulates-vessel-remodelling-in-scleroderma-associated-pulmonary-arterial-hypertension
#7
JOURNAL ARTICLE
Ioannis Papaioannou, Athina Dritsoula, Ping Kang, Reshma S Baliga, Sarah L Trinder, Emma Cook, Shiwen Xu, Adrian Hobbs, Christopher P Denton, David J Abraham, Markella Ponticos
NKX2-5 is a member of the homeobox-containing transcription factors critical in regulating tissue differentiation in development. Here, we report a role for NKX2-5 in vascular smooth muscle cell phenotypic modulation in vitro and in vascular remodelling in vivo. NKX2-5 is up-regulated in scleroderma (SSc) patients with pulmonary arterial hypertension. Suppression of NKX2-5 expression in smooth muscle cells, halted vascular smooth muscle proliferation and migration, enhanced contractility and blocked the expression of the extracellular matrix genes...
April 23, 2024: JCI Insight
https://read.qxmd.com/read/38652282/2-methoxyestradiol-ameliorates-doxorubicin-induced-cardiotoxicity-by-regulating-the-expression-of-glut4-and-cpt-1b-in-female-rats
#8
JOURNAL ARTICLE
Mohamed H Sobhy, Ahmed Ismail, Mohammed S Abdel-Hamid, Mohamed Wagih, Marwa Kamel
The clinical usage of doxorubicin (DOX) is hampered due to cardiomyopathy. Studies reveal that estrogen (E2) modulates DOX-induced cardiotoxicity. Yet, the exact mechanism is unclear. The objective of the current study is to evaluate the influence of E2 and more specifically its metabolite 2-methoxyestradiol (2ME) on cardiac remodeling and the reprogramming of cardiac metabolism in rats subjected to DOX cardiotoxicity. Seventy-two female rats were divided into groups. Cardiotoxicity was induced by administering DOX (2...
April 23, 2024: Naunyn-Schmiedeberg's Archives of Pharmacology
https://read.qxmd.com/read/38652261/predicting-prognosis-and-immunotherapy-response-in-colorectal-cancer-by-pericytes-insights-from-single-cell-rna-sequencing
#9
JOURNAL ARTICLE
Chen Wei, Weikai Wang, Zhihao Hu, Zhuoli Huang, Ye Lu, Wenwen Zhou, Xiaoying Liu, Xin Jin, Jianhua Yin, Guibo Li
Immunotherapy has revolutionized the treatment of tumors, but there are still a large number of patients who do not benefit from immunotherapy. Pericytes play an important role in remodeling the immune microenvironment. However, how pericytes affect the prognosis and treatment resistance of tumors is still unknown. This study jointly analyzed single-cell RNA sequencing (scRNA-seq) data and bulk RNA sequencing data of multiple cancers to reveal pericyte function in the colorectal cancer microenvironment. Analyzing over 800 000 cells, it was found that colorectal cancer had more pericyte enrichment in tumor tissues than other cancers...
April 23, 2024: Human Molecular Genetics
https://read.qxmd.com/read/38652118/brg1-programs-prc2-complex-repression-and-controls-oligodendrocyte-differentiation-and-remyelination
#10
JOURNAL ARTICLE
Jiajia Wang, Lijun Yang, Yiwen Du, Jincheng Wang, Qinjie Weng, Xuezhao Liu, Eva Nicholson, Mei Xin, Qing Richard Lu
Chromatin-remodeling protein BRG1/SMARCA4 is pivotal for establishing oligodendrocyte (OL) lineage identity. However, its functions for oligodendrocyte-precursor cell (OPC) differentiation within the postnatal brain and during remyelination remain elusive. Here, we demonstrate that Brg1 loss profoundly impairs OPC differentiation in the brain with a comparatively lesser effect in the spinal cord. Moreover, BRG1 is critical for OPC remyelination after injury. Integrative transcriptomic/genomic profiling reveals that BRG1 exhibits a dual role by promoting OPC differentiation networks while repressing OL-inhibitory cues and proneuronal programs...
July 1, 2024: Journal of Cell Biology
https://read.qxmd.com/read/38651870/controlling-nanoparticle-induced-endothelial-leakiness-with-the-protein-corona
#11
JOURNAL ARTICLE
Aparna Nandakumar, Huayuan Tang, Nicholas Andrikopoulos, John F Quinn, Feng Ding, Pu Chun Ke, Yuhuan Li
Understanding nanoparticle-cell interaction is essential for advancing research in nanomedicine and nanotoxicology. Apart from the transcytotic pathway mediated by cellular recognition and energetics, nanoparticles (including nanomedicines) may harness the paracellular route for their transport by inducing endothelial leakiness at cadherin junctions. This phenomenon, termed as NanoEL, is correlated with the physicochemical properties of the nanoparticles in close association with cellular signalling, membrane mechanics, as well as cytoskeletal remodelling...
April 23, 2024: Nanoscale
https://read.qxmd.com/read/38651563/local-alpha1-antitrypsin-accelerates-the-healing-of-tympanic-membrane-perforation-in-mice
#12
JOURNAL ARTICLE
Sabri El-Saied, Amit Amar, Daniel M Kaplan, Rivka Shitrit, Benyamin M Kaminer, Aharon Keshet, Eli C Lewis
BACKGROUND: Most tympanic membrane (TM) perforations heal spontaneously, but 10%-20% remain chronic and might lead to impaired hearing and recurrent middle ear infections. Alpha1-antitrypsin (AAT) is a circulating tissue-protective protein that is elevated under inflammatory conditions and is currently indicated for genetic AAT deficiency. Recently, AAT has been shown to promote tissue remodeling and inflammatory resolution. OBJECTIVE: This study aimed to examine the effects of local clinical-grade AAT treatment on tissue repair in a mouse model of acute traumatic TM perforation...
April 23, 2024: Laryngoscope
https://read.qxmd.com/read/38651453/a-2024-update-on-menin-inhibitors-a-new-class-of-target-agents-against-kmt2a-rearranged-and-npm1-mutated-acute-myeloid-leukemia
#13
REVIEW
Anna Candoni, Gabriele Coppola
Menin inhibitors are new and promising agents currently in clinical development that target the HOX/MEIS1 transcriptional program which is critical for leukemogenesis in histone-lysine N-methyltransferase 2A-rearranged (KMT2Ar) and in NPM1-mutated (NPM1mut) acute leukemias. The mechanism of action of this new class of agents is based on the disruption of the menin-KMT2A complex (consisting of chromatin remodeling proteins), leading to the differentiation and apoptosis of AML cells expressing KMT2A or with mutated NPM1...
April 18, 2024: Hematology Reports
https://read.qxmd.com/read/38651225/outcomes-of-concomitant-maze-procedure-in-tricuspid-repair-for-severe-tricuspid-regurgitation
#14
JOURNAL ARTICLE
Ilkun Park, Suryeun Chung, Yang Hyun Cho, Kiick Sung, Wook Sung Kim, Kyungsub Song, Joong Hyun Ahn, Chang Seok Jeon, Pyo Won Park, Dong Seop Jeong
BACKGROUND: We aimed to analyze the impact of concomitant Maze procedure on the clinical and rhythm outcomes, and echocardiographic parameters in tricuspid repair for patients with severe tricuspid regurgitation (TR) and persistent atrial fibrillation (AF). METHODS: Patients who had severe TR and persistent AF and underwent tricuspid valve (TV) repair were included in the study. Both primary TR and secondary TR were included in the current study. The study population was stratified according to Maze procedure...
April 22, 2024: Journal of Korean Medical Science
https://read.qxmd.com/read/38650987/redox-signaling-and-skeletal-muscle-adaptation-during-aerobic-exercise
#15
REVIEW
Yingsong Zhou, Xuan Zhang, Julien S Baker, Gareth W Davison, Xiaojun Yan
Redox regulation is a fundamental physiological phenomenon related to oxygen-dependent metabolism, and skeletal muscle is mainly regarded as a primary site for oxidative phosphorylation. Several studies have revealed the importance of reactive oxygen and nitrogen species (RONS) in the signaling process relating to muscle adaptation during exercise. To date, improving knowledge of redox signaling in modulating exercise adaptation has been the subject of comprehensive work and scientific inquiry. The primary aim of this review is to elucidate the molecular and biochemical pathways aligned to RONS as activators of skeletal muscle adaptation and to further identify the interconnecting mechanisms controlling redox balance...
May 17, 2024: IScience
https://read.qxmd.com/read/38650964/striped-expression-of-leucine-rich-repeat-proteins-coordinates-cell-intercalation-and-compartment-boundary-formation-in-the-early-drosophila-embryo
#16
JOURNAL ARTICLE
Chloe A Kuebler, Adam C Paré
Planar polarity is a commonly observed phenomenon in which proteins display a consistent asymmetry in their subcellular localization or activity across the plane of a tissue. During animal development, planar polarity is a fundamental mechanism for coordinating the behaviors of groups of cells to achieve anisotropic tissue remodeling, growth, and organization. Therefore, a primary focus of developmental biology research has been to understand the molecular mechanisms underlying planar polarity in a variety of systems to identify conserved principles of tissue organization...
August 2023: Symmetry
https://read.qxmd.com/read/38650937/phenotypic-comparison-and-the-potential-antitumor-function-of-immortalized-bone-marrow-derived-macrophages-ibmdms
#17
JOURNAL ARTICLE
Dong-Kun Xie, Jin Yao, Peng-Hui Li, Yan-Wen Zhu, Jia-Nuo Chen, Xiu-Li Cao, Shi-Lin Cheng, Ya-Miao Chen, Yi-Fei Huang, Liang Wang, Zan-Han Wang, Rong Qiao, Jia-Mei Ge, Huan Yue, Li Wei, Zhong-Yuan Liu, Hua Han, Hong-Yan Qin, Jun-Long Zhao
INTRODUCTION: Macrophages are an important component of innate immunity and involved in the immune regulation of multiple diseases. The functional diversity and plasticity make macrophages to exhibit different polarization phenotypes after different stimuli. During tumor progression, the M2-like polarized tumor-associated macrophages (TAMs) promote tumor progression by assisting immune escape, facilitating tumor cell metastasis, and switching tumor angiogenesis. Our previous studies demonstrated that functional remodeling of TAMs through engineered-modifying or gene-editing provides the potential immunotherapy for tumor...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38650935/lung-specific-interleukin-6-mediated-transglutaminase-2-activation-and-cardiopulmonary-fibrogenesis
#18
JOURNAL ARTICLE
Krishna C Penumatsa, Yamini Sharma, Rod R Warburton, Adit Singhal, Deniz Toksoz, Chinmayee D Bhedi, Guanming Qi, Ioana R Preston, Christina Anderlind, Nicholas S Hill, Barry L Fanburg
Pulmonary hypertension (PH) pathogenesis is driven by inflammatory and metabolic derangements as well as glycolytic reprogramming. Induction of both interleukin 6 (IL6) and transglutaminase 2 (TG2) expression participates in human and experimental cardiovascular diseases. However, little is known about the role of TG2 in these pathologic processes. The current study aimed to investigate the molecular interactions between TG2 and IL6 in mediation of tissue remodeling in PH. A lung-specific IL6 over-expressing transgenic mouse strain showed elevated right ventricular (RV) systolic pressure as well as increased wet and dry tissue weights and tissue fibrosis in both lungs and RVs compared to age-matched wild-type littermates...
2024: Frontiers in Immunology
https://read.qxmd.com/read/38650625/sijunzi-decoction-alleviates-inflammation-and-intestinal-epithelial-barrier-damage-and-modulates-the-gut-microbiota-in-ulcerative-colitis-mice
#19
JOURNAL ARTICLE
Hailun Li, Xing Pu, Yongtao Lin, Xinxin Yu, Jing Li, Lin Bo, Hongwu Wang, Yong Xu, Xiang Li, Donghui Zheng
ETHNOPHARMACOLOGICAL RELEVANCE: As a representative classical prescription, Sijunzi decoction has powerful therapeutic effects on spleen-stomach qi insufficiency. Ulcerative colitis (UC) is a chronic, diffuse, and non-specifically inflammatory disorder, the etiology of which still remains unclear. In the traditional Chinese medicine (TCM) perspective, splenic asthenia is the primary cause of UC. Based on this, Sijunzi decoction has been extensively used in TCM clinical practice to alleviate UC in recent years...
2024: Frontiers in Pharmacology
https://read.qxmd.com/read/38650587/progress-in-the-study-of-the-role-and-mechanism-of-htra1-in-diseases-related-to-vascular-abnormalities
#20
REVIEW
Shina Song, Xiaofeng Li, Xuting Xue, Wenping Dong, Changxin Li
High temperature requirement A1 (HTRA1) is a member of the serine protease family, comprising four structural domains: IGFBP domain, Kazal domain, protease domain and PDZ domain. HTRA1 encodes a serine protease, a secreted protein that is widely expressed in the vasculature. HTRA1 regulates a wide range of physiological processes through its proteolytic activity, and is also involved in a variety of vascular abnormalities-related diseases. This article reviews the role of HTRA1 in the development of vascular abnormalities-related hereditary cerebral small vessel disease (CSVD), age-related macular degeneration (AMD), tumors and other diseases...
2024: International Journal of General Medicine
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