keyword
https://read.qxmd.com/read/35655316/genome-wide-linkage-search-for-cancer-susceptibility-loci-in-a-cohort-of-non-brca1-2-families-in-sri-lanka
#1
JOURNAL ARTICLE
Prabhavi Wijesiriwardhana, Anthony M Musolf, Joan E Bailey-Wilson, T Kalum Wetthasinghe, Vajira H W Dissanayake
OBJECTIVE: Although linkage studies have been utilized for the identification of variants associated with cancer in the world, little is known about their role in non BRCA1/2 individuals in the Sri Lankans. Hence we performed linkage analysis to identify susceptibility loci related to the inherited risk of cancer in a cohort of Sri Lankans affected with hereditary breast cancer. The Illumina global screening array having 654,027 single nucleotide polymorphism markers was performed in four families, in which at least three individuals within third degree relatives were affected by breast cancer...
June 2, 2022: BMC Research Notes
https://read.qxmd.com/read/35133274/multiple-9-1-1-complexes-promote-homolog-synapsis-dsb-repair-and-atr-signaling-during-mammalian-meiosis
#2
JOURNAL ARTICLE
Catalina Pereira, Gerardo A Arroyo-Martinez, Matthew Z Guo, Michael S Downey, Emma R Kelly, Kathryn J Grive, Shantha K Mahadevaiah, Jennie R Sims, Vitor M Faca, Charlton Tsai, Carl J Schiltz, Niek Wit, Heinz Jacobs, Nathan L Clark, Raimundo Freire, James Turner, Amy M Lyndaker, Miguel A Brieno-Enriquez, Paula E Cohen, Marcus B Smolka, Robert S Weiss
DNA damage response mechanisms have meiotic roles that ensure successful gamete formation. While completion of meiotic double-strand break (DSB) repair requires the canonical RAD9A-RAD1-HUS1 (9A-1-1) complex, mammalian meiocytes also express RAD9A and HUS1 paralogs, RAD9B and HUS1B, predicted to form alternative 9-1-1 complexes. The RAD1 subunit is shared by all predicted 9-1-1 complexes and localizes to meiotic chromosomes even in the absence of HUS1 and RAD9A. Here, we report that testis-specific disruption of RAD1 in mice resulted in impaired DSB repair, germ cell depletion, and infertility...
February 8, 2022: ELife
https://read.qxmd.com/read/32663249/potentially-functional-variants-in-nucleotide-excision-repair-pathway-genes-predict-platinum-treatment-response-of-chinese-ovarian-cancer-patients
#3
JOURNAL ARTICLE
Haoran Li, Hongji Dai, Tingyan Shi, Xi Cheng, Menghong Sun, Kexin Chen, Mengyun Wang, Qingyi Wei
Acquired platinum resistance impedes successful treatment of epithelial ovarian cancer (EOC), and this resistance may be associated with inherited DNA damage-repair response. In the present study, we performed a two-phase analysis to assess associations between 8191 single-nucleotide polymorphisms (SNPs) within 127 genes of nucleotide excision repair (NER) pathway from a genome-wide association study (GWAS) dataset and platinum treatment response in 803 Han Chinese EOC patients. As a result, we identified that platinum-based chemotherapeutic response was associated with two potential functional variants MNAT1 rs2284704 T>C (TC+CC vs...
July 14, 2020: Carcinogenesis
https://read.qxmd.com/read/26911255/the-hus1b-promoter-is-hypomethylated-in-the-placentas-of-low-birth-weight-infants
#4
JOURNAL ARTICLE
Janette Mareska Rumbajan, Yuko Yamaguchi, Kazuhiko Nakabayashi, Ken Higashimoto, Hitomi Yatsuki, Kenichi Nishioka, Kentaro Matsuoka, Shigehisa Aoki, Shuji Toda, Satoru Takeda, Hiroyuki Seki, Izuho Hatada, Kenichiro Hata, Hidenobu Soejima, Keiichiro Joh
Aberrant DNA methylation is associated with a range of human disorders. To identify differences in DNA methylation of gene promoters between placentas of low-birth-weight (LBW) and normal-birth-weight (NBW) infants, we screened 8091 genes for aberrant methylation in placentas using microarray-based integrated analysis of methylation by isoschizomers (MIAMI). Seven candidate genes for hypomethylation in the placentas of LBW infants were selected. Among these candidates, COBRA analyses suggested that the HUS1B gene was hypomethylated in some of the placentas...
June 1, 2016: Gene
https://read.qxmd.com/read/25305228/differential-susceptible-loci-expression-in-keloid-and-hypertrophic-scars-in-the-chinese-han-population
#5
JOURNAL ARTICLE
Guodong Teng, Chang Liu, Minliang Chen, Kui Ma, Liming Liang, Tongtong Yan
BACKGROUND: Hypertrophic scars (HSs) and keloids (KDs) are commonly seen as 2 different diseases. We aimed to find potential genes associated with KD and HS formation. METHODS: We selected 4 single-nucleotide polymorphisms (SNPs) (based on the whole genome resequencing we have done) for replication in 71 KDs and 50 HSs using the Sequenom Massarray system. RESULTS: We found evidence of significant association at rs181924090, P = 0.0075; rs183178644, P = 0...
January 2015: Annals of Plastic Surgery
https://read.qxmd.com/read/24013428/clamping-down-on-mammalian-meiosis
#6
JOURNAL ARTICLE
Amy M Lyndaker, Ana Vasileva, Debra J Wolgemuth, Robert S Weiss, Howard B Lieberman
The RAD9A-RAD1-HUS1 (9-1-1) complex is a PCNA-like heterotrimeric clamp that binds damaged DNA to promote cell cycle checkpoint signaling and DNA repair. While various 9-1-1 functions in mammalian somatic cells have been established, mounting evidence from lower eukaryotes predicts critical roles in meiotic germ cells as well. This was investigated in 2 recent studies in which the 9-1-1 complex was disrupted specifically in the mouse male germline through conditional deletion of Rad9a or Hus1. Loss of these clamp subunits led to severely impaired fertility and meiotic defects, including faulty DNA double-strand break repair...
October 1, 2013: Cell Cycle
https://read.qxmd.com/read/14611806/identification-and-characterization-of-rad9b-a-paralog-of-the-rad9-checkpoint-gene
#7
COMPARATIVE STUDY
Vanessa M Dufault, Andrea J Oestreich, Benjamin T Vroman, Larry M Karnitz
RAD9 is an integral element of the PCNA-like HUS1-RAD1-RAD9 (9-1-1) complex that participates in genotoxin-induced CHK1 activation. We have identified a novel RAD9 paralog, dubbed RAD9B, in humans and mice. RAD9 and RAD9B share extensive amino acid homology throughout their entire sequences (36% identity, 48% similarity). Northern blotting revealed that RAD9B transcripts are highly expressed in human testes, with lower levels found in skeletal muscle. In contrast, RT-PCR analysis and immunoprecipitation demonstrated that RAD9B is also expressed in tumor cells...
December 2003: Genomics
https://read.qxmd.com/read/11944979/identification-and-characterization-of-a-paralog-of-human-cell-cycle-checkpoint-gene-hus1
#8
JOURNAL ARTICLE
Haiying Hang, Yuzhu Zhang, Roland L Dunbrack, Cuidong Wang, Howard B Lieberman
A paralog of the human cell cycle checkpoint gene HUS1 has been identified and designated HUS1B. It encodes a 278-amino-acid protein, 48% identical and 69% similar to HUS1. Mouse and rat orthologs of HUS1B have also been detected by a BLAST search. HUS1B is expressed variably in many human tissues, and the tissue-specific levels observed parallel those for HUS1. A HUS1-RAD1-RAD9 protein complex is thought to form a proliferating cell nuclear antigen (PCNA)-like structure, important for cell cycle checkpoint function...
April 2002: Genomics
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