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https://www.readbyqxmd.com/read/28208275/comprehensive-three-dimensional-gas-chromatography-with-time-of-flight-mass-spectrometry
#1
Nathanial E Watson, H Daniel Bahaghighat, Ke Cui, Robert E Synovec
Development of comprehensive, three-dimensional (3D) gas chromatography with time-of-flight mass spectrometric detection (GC(3)/TOFMS) is described. This instrument provides four dimensions (4D) of chemical selectivity and includes significant improvements to total selectivity (mass spectrometric and chromatographic), peak identification, and operational temperature range relative to previous models of the GC(3) reported. The new instrumental design and data output are evaluated and illustrated via two samples, a 115-component test mixture and a diesel fuel spiked with several compounds, for the purpose of illustrating the chemical selectivity benefits of this instrumental platform...
February 7, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28207236/using-roc-curves-to-optimize-discovery-based-software-with-comprehensive-two-dimensional-gas-chromatography-with-time-of-flight-mass-spectrometry
#2
Brooke C Reaser, Bob W Wright, Robert E Synovec
We report a quantitative approach to optimize implementation of discovery-based software for comprehensive two-dimensional gas chromatography coupled with time-of-flight mass spectrometry (GC × GC - TOFMS). The software performs a tile-based Fisher ratio (F-ratio) analysis, and facilitates a supervised non-targeted analysis based upon the experimental design to aid in the discovery of analytes with statistically different variances between sample classes. The quantitative approach for software optimization uses receiver operating characteristic (ROC) curves...
February 16, 2017: Analytical Chemistry
https://www.readbyqxmd.com/read/28188804/metabolite-profiling-of-infection-associated-metabolic-markers-of-onchocerciasis
#3
Sasisekhar Bennuru, Sara Lustigman, David Abraham, Thomas B Nutman
The global efforts for onchocerciasis elimination may require additional tools (safe micro and macrofilaricidal drugs, vaccines and biomarkers) as elimination efforts move toward the "end game". Efforts toward the identification of suitable biomarkers have focused on specific protein(s) and/or nucleic acids, but metabolites present an alternative option as they have limited half-lives and are the result of combinatorial effects. In comparison to previously used methodology of LC-MS for metabolomic approaches, we used a non-targeted capillary electrophoresis time-of-flight mass spectrometry (CE-TOFMS) to analyze the serum metabolic profiles of Ov-infected and -uninfected individuals (n=20)...
February 8, 2017: Molecular and Biochemical Parasitology
https://www.readbyqxmd.com/read/28173924/chemometric-analysis-of-comprehensive-two-dimensional-gas-chromatography-mass-spectrometry-metabolomics-data
#4
Yahya Izadmanesh, Elba Garreta-Lara, Jahan B Ghasemi, Silvia Lacorte, Victor Matamoros, Roma Tauler
Comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry (GC×GC-TOFMS) is a powerful tool for separation and identification of analytes in complex natural samples. In this paper, different chemometric methods were compared for fast non-targeted GC×GC-TOFMS metabolomic profiling of the crustaceous species Daphnia magna and a general chemometric strategy and workflow is proposed. The strategy proposed in this work combined the compression of GC×GC-TOFMS data matrices in the retention time direction using wavelets and the appropriate column-wise data matrix augmentation arrangement, and its modeling by Multivariate Curve Resolution-Alternating Least Squares (MCR-ALS)...
March 10, 2017: Journal of Chromatography. A
https://www.readbyqxmd.com/read/28153256/characterization-of-thin-film-tandem-solar-cells-by-radiofrequency-pulsed-glow-discharge-time-of-flight-mass-spectrometry
#5
Beatriz Fernandez, Lara Lobo, Nies Reininghaus, Rosario Pereiro, Alfredo Sanz-Medel
Beside low production costs and the use of nontoxic and abundant raw materials, silicon based thin-film solar cells have the advantage to be built up as multi junction devices like tandem or triple junction solar cells. Silicon thin film modules made of tandem cells with hydrogenated amorphous silicon (a-Si:H) top cell and microcrystalline (μc) Si:H bottom cell are available on the market. In this work, the analytical potential of state-of-the art radiofrequency (rf) pulsed glow discharge (PGD) time of flight mass spectrometry (TOFMS) commercial instrumentation is investigated for depth profiling analysis of tandem-junctions solar cells on 2mm thick glass substrate with 1µm thick ZnO:Al...
April 1, 2017: Talanta
https://www.readbyqxmd.com/read/28121990/colonic-absorption-of-low-molecular-weight-metabolites-influenced-by-the-intestinal-microbiome-a-pilot-study
#6
Mitsuharu Matsumoto, Takushi Ooga, Ryoko Kibe, Yuji Aiba, Yasuhiro Koga, Yoshimi Benno
Low-molecular-weight metabolites produced by the intestinal microbiome play a direct role in health and disease. However, little is known about the ability of the colon to absorb these metabolites. It is also unclear whether these metabolites are bioavailable. Here, metabolomics techniques (capillary electrophoresis with time-of-flight mass spectrometry, CE-TOFMS), germ-free (GF) mice, and colonized (Ex-GF) mice were used to identify the colonic luminal metabolites transported to colonic tissue and/or blood...
2017: PloS One
https://www.readbyqxmd.com/read/28118975/feasibility-of-ultra-performance-liquid-chromatography-ion-mobility-time-of-flight-mass-spectrometry-in-analyzing-oxysterols
#7
Petri Kylli, Thomas Hankemeier, Risto Kostiainen
Oxysterols are oxygenated cholesterols that are important in many cell functions and they may also be indicative of certain diseases. The purpose of this work was to study the feasibility of ultra-performance liquid chromatography-ion mobility-time-of-flight mass spectrometry (UPLC-IM-TOFMS) using traveling wave cell in analyzing oxysterols and especially their isomers in biological samples. Oxysterols were analyzed as their p-toluenesulfonyl isocyanate derivatives, which improved the separation of isomeric oxysterols by ion mobility and ionization efficiency in the electrospray ionization step...
March 3, 2017: Journal of Chromatography. A
https://www.readbyqxmd.com/read/28110945/elucidation-of-the-aroma-compositions-of-zhenjiang-aromatic-vinegar-using-comprehensive-two-dimensional-gas-chromatography-coupled-to-time-of-flight-mass-spectrometry-and-gas-chromatography-olfactometry
#8
Zhilei Zhou, Shuangping Liu, Xiangwei Kong, Zhongwei Ji, Xiao Han, Jianfeng Wu, Jian Mao
In this work, a method to characterize the aroma compounds of Zhenjiang aromatic vinegar (ZAV) was developed using comprehensive two dimensional gas chromatography (GC×GC) coupled with time-of-flight mass spectrometry (TOFMS) and gas chromatography olfactometry (GC-O). The column combination was optimized and good separation was achieved. Structured chromatograms of furans and pyrazines were obtained and discussed. A total of 360 compounds were tentatively identified based on mass spectrum match factors, structured chromatogram and linear retention indices comparison...
March 3, 2017: Journal of Chromatography. A
https://www.readbyqxmd.com/read/28107982/quantification-of-real-thermal-catalytic-and-hydrodeoxygenated-bio-oils-via-comprehensive-two-dimensional-gas-chromatography-with-mass-spectrometry
#9
Raquel V S Silva, Nathalia S Tessarolo, Vinícius B Pereira, Vitor L Ximenes, Fábio L Mendes, Marlon B B de Almeida, Débora A Azevedo
The elucidation of bio-oil composition is important to evaluate the processes of biomass conversion and its upgrading, and to suggest the proper use for each sample. Comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry (GC×GC-TOFMS) is a widely applied analytical approach for bio-oil investigation due to the higher separation and resolution capacity from this technique. This work addresses the issue of analytical performance to assess the comprehensive characterization of real bio-oil samples via GC×GC-TOFMS...
March 1, 2017: Talanta
https://www.readbyqxmd.com/read/28088709/characterization-of-smokeless-powders-using-multiplexed-collision-induced-dissociation-mass-spectrometry-and-chemometric-procedures
#10
Kristen L Reese, A Daniel Jones, Ruth Waddell Smith
This work demonstrates a non-targeted mass spectrometry approach for identification of organic compounds in smokeless powders. Unburned powders were removed from various commercial ammunitions of different brand, primer composition, caliber, and age. The unburned powders and corresponding fired residues were analyzed by liquid chromatography-atmospheric pressure chemical ionization-time-of-flight mass spectrometry (LC-APCI-TOFMS). Multiplexed collision-induced dissociation was performed at increasing collision potentials resulting in successive fragmentation that provided structural information for compound identification in a non-targeted manner...
December 21, 2016: Forensic Science International
https://www.readbyqxmd.com/read/28029296/characterization-of-kewda-volatile-components-by-comprehensive-two-dimensional-gas-chromatography-time-of-flight-mass-spectrometry
#11
Noohi Nasim, Asit Ray, Subhashree Singh, Sudipta Jena, Ambika Sahoo, Basudeba Kar, I Sriram Sandeep, Sujata Mohanty, Sanghamitra Nayak
Kewda (Pandanus fascicularis Lam.) is a well known medicinal and aromatic plant. The paper aims to precisely characterize volatile constituents present in Kewda flower oil using comprehensive two-dimensional gas chromatography coupled to time of flight mass spectrometry (GCxGC-TOFMS). A total of 159 components were identified due to enhanced chromatographic separation and mass spectral deconvolution of GCxGC-TOFMS. On the basis of its chemical structure, the identified compounds were grouped into hydrocarbons, alcohols, ethers, ketones, esters, nitrogen compounds, aldehydes, acids, lactones, halides and sulfur containing compounds...
April 2017: Natural Product Research
https://www.readbyqxmd.com/read/28028595/comprehensive-two-dimensional-gas-chromatographic-profiling-and-chemometric-interpretation-of-the-volatile-profiles-of-sweat-in-knit-fabrics
#12
A Paulina de la Mata, Rachel H McQueen, Seo Lin Nam, James J Harynuk
Human axillary sweat is a poorly explored biofluid within the context of metabolomics when compared to other fluids such as blood and urine. In this paper, we explore the volatile organic compounds emitted from two different types of fabric samples (cotton and polyester) which had been worn repeatedly during exercise by participants. Headspace solid-phase microextraction (SPME) and comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry (GC×GC-TOFMS) were employed to profile the (semi)volatile compounds on the fabric...
March 2017: Analytical and Bioanalytical Chemistry
https://www.readbyqxmd.com/read/28011407/non-steroidal-anti-inflammatory-drugs-in-the-watercourses-of-elbe-basin-in-czech-republic
#13
Petr Marsik, Jan Rezek, Monika Židková, Barbora Kramulová, Jan Tauchen, Tomáš Vaněk
Non-steroidal anti-inflammatory drugs (NSAIDs) belong to most used pharmaceuticals in the human and veterinary medicine. The widespread consumption of NSAIDs has led to their ubiquitous occurrence in water environment including large river systems. In the present study, concentrations of the five most frequently used NSAIDs (ibuprofen, diclofenac, naproxen, ketoprofen and indomethacin) were determined in the watercourses of the river Elbe basin in Czech Republic. The presence of the pharmaceuticals was measured at 29 sampling sites including urban and rural areas, small creeks and main tributaries of the Elbe monthly from April to December of 2011...
December 14, 2016: Chemosphere
https://www.readbyqxmd.com/read/28007176/potential-of-capillary-electrophoresis-mass-spectrometry-for-the-characterization-and-monitoring-of-amine-derivatized-naphthenic-acids-from-oil-sands-process-affected-water
#14
Matthew S MacLennan, Cai Tie, Kevin Kovalchik, Kerry M Peru, Xinxiang Zhang, John V Headley, David D Y Chen
Capillary electrophoresis coupled to mass spectrometry (CE-MS) was used for the analysis of naphthenic acid fraction compounds (NAFCs) of oil sands process-affected water (OSPW). A standard mixture of amine-derivatized naphthenic acids is injected directly onto the CE column and analyzed by CE-MS in less than 15min. Time of flight MS analysis (TOFMS), optimized for high molecular weight ions, showed NAFCs between 250 and 800m/z. With a quadrupole mass analyzer, only low-molecular weight NAFCs (between 100 and 450m/z) are visible under our experimental conditions...
November 2016: Journal of Environmental Sciences (China)
https://www.readbyqxmd.com/read/27999311/metabolomic-approaches-to-explore-chemical-diversity-of-human-breast-milk-formula-milk-and-bovine-milk
#15
Linxi Qian, Aihua Zhao, Yinan Zhang, Tianlu Chen, Steven H Zeisel, Wei Jia, Wei Cai
Although many studies have been conducted on the components present in human breast milk (HM), research on the differences of chemical metabolites between HM, bovine milk (BM) and formula milk (FM) is limited. This study was to explore the chemical diversity of HM, BM and FM by metabolomic approaches. GC-TOFMS and UPLC-QTOFMS were applied to investigate the metabolic compositions in 30 HM samples, 20 FM samples and 20 BM samples. Metabolite profiling identified that most of the non-esterified fatty acids, which reflected the hydrolysis of triglycerides, were much more abundant in HM than those in FM and BM, except for palmitic acid and stearic acid...
December 17, 2016: International Journal of Molecular Sciences
https://www.readbyqxmd.com/read/27987862/structural-features-and-anticancer-activity-in-vitro-of-fucoidan-derivatives-from-brown-alga-saccharina-cichorioides
#16
Stanislav D Anastyuk, Natalia M Shevchenko, Roza V Usoltseva Menshova, Artyom S Silchenko, Pavel A Zadorozhny, Pavel S Dmitrenok, Svetlana P Ermakova
A fucoidan ScF from brown alga Saccharina cichorioides was extracted, purified and partially depolymerized by autohydrolysis at 37°C for 24, 48 and 72h. Supernatant (SN) and pellet (PL) fractions were obtained by ethanol precipitation of each sample. Unlike spectral data of ScF, NMR of PL derivatives clearly suggested the structure: 1,3-linked α-l-Fucp-4-OSO3(-) repeating unit. Molecular weights (MWs) of PL fractions were 30, 26 and 18kDa for 24, 48 and 72h of autohydrolyis, respectively. MALDI-TOFMS, size-exclusion HPLC and carbohydrate polyacrylamide-gel electrophoresis (C-PAGE) indicated a similarity of SN mixtures...
February 10, 2017: Carbohydrate Polymers
https://www.readbyqxmd.com/read/27976851/three-dimensional-elemental-imaging-of-nantan-meteorite-via-femtosecond-laser-ionization-time-of-flight-mass-spectrometry
#17
Miaohong He, Yifan Meng, Shanshan Yan, Wei Hang, Wenge Zhou, Benli Huang
Femtosecond laser ionization time-of-flight mass spectrometry (fs-LI-TOFMS) is introduced for the three-dimensional elemental analysis of a Nantan meteorite. Spatially resolved multielemental imaging of major and minor compositions in a meteorite are presented with a lateral resolution of 50 μm and a depth resolution of 7 μm. Distinct 3D distributions of siderophile, lithophile, and chalcophile elements are revealed. Co and Ni are highly siderophile (Iron-loving), mainly enriched in the metal phase. Cr, Cu, V, and Mn are enriched in the sulfide for their chalcophile (S-loving) tendency...
December 15, 2016: Analytical Chemistry
https://www.readbyqxmd.com/read/27934237/highly-selective-screening-of-estrogenic-compounds-in-consumer-electronics-plastics-by-liquid-chromatography-in-parallel-combined-with-nanofractionation-bioactivity-detection-and-mass-spectrometry
#18
Willem Jonker, Ana Ballesteros-Gómez, Timo Hamers, Govert W Somsen, Marja H Lamoree, Jeroen Kool
The chemical safety of consumer products is an issue of emerging concern. Plastics are widely used, e.g. as casings of consumer electronics (TVs, computers, routers, etc.), which are present in houses and offices in continuously increasing numbers. In this study, we investigate the estrogenic activity of components of plastics coming from electronics' casings. A recently developed fractionation platform for effect-directed analysis (EDA) was used. This platform combines reversed-phase liquid chromatography in parallel with bioassay detection via nanofractionation and with online high-resolution time-of-flight mass spectrometry (TOFMS) for the identification of bioactives...
November 15, 2016: Environmental Science & Technology
https://www.readbyqxmd.com/read/27930839/expanding-the-klebsiella-pneumoniae-volatile-metabolome-using-advanced-analytical-instrumentation-for-the-detection-of-novel-metabolites
#19
C A Rees, F A Franchina, K V Nordick, P J Kim, J E Hill
AIMS: The purpose of this study was to identify the volatile molecules produced by the pathogenic Gram-negative bacterium Klebsiella pneumoniae (ATCC 13883) during in vitro growth using comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry (GC×GC-TOFMS). METHODS AND RESULTS: Klebsiella pneumoniae ATCC 13883 was incubated in lysogeny broth to mid-exponential and stationary growth phases. Headspace volatile molecules from culture supernatants were concentrated using solid-phase microextraction (SPME) and analysed via GC×GC-TOFMS...
December 8, 2016: Journal of Applied Microbiology
https://www.readbyqxmd.com/read/27914609/determination-of-diamondoids-in-crude-oils-using-gas-purge-microsyringe-extraction-with-comprehensive-two-dimensional-gas-chromatography-time-of-flight-mass-spectrometry
#20
Wanfeng Zhang, Shukui Zhu, Liling Pang, Xuanbo Gao, Gang-Tian Zhu, Donghao Li
Based on a homemade device, gas purge microsyringe extraction (GP-MSE) of crude oil samples was developed for the first time. As a simple, fast, low-cost, sensitive and solvent-saving technique, GP-MSE provides some outstanding advantages over the widely used sample preparation methods for crude oils such as column chromatography (ASTM D2549). Several parameters affecting extraction efficiency were optimized, including extraction temperature, extraction time, extraction solvent, condensing temperature and purge gas flow rate...
December 23, 2016: Journal of Chromatography. A
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