keyword
https://read.qxmd.com/read/35783286/potential-targets-for-crispr-cas-knockdowns-to-enhance-genetic-resistance-against-some-diseases-in-wheat-triticum-aestivum-l
#21
REVIEW
Mehwish Taj, Muhammad Sajjad, Mingju Li, Arooj Yasmeen, Muhammad Salman Mubarik, Sirisha Kaniganti, Chi He
Wheat is one of the most important food crops worldwide. Even though wheat yields have increased considerably in recent years, future wheat production is predicted to face enormous challenges due to global climate change and new versions of diseases. CRISPR/Cas technology is a clean gene technology and can be efficiently used to target genes prone to biotic stress in wheat genome. Herein, the published research papers reporting the genetic factors corresponding to stripe rust, leaf rust, stem rust, powdery mildew, fusarium head blight and some insect pests were critically reviewed to identify negative genetic factors (Susceptible, S genes) in bread wheat...
2022: Frontiers in Genetics
https://read.qxmd.com/read/35731221/a-chromosome-level-fully-phased-genome-assembly-of-the-oat-crown-rust-fungus-puccinia-coronata-f-sp-avenae-a-resource-to-enable-comparative-genomics-in-the-cereal-rusts
#22
JOURNAL ARTICLE
Eva C Henningsen, Tim Hewitt, Sheshanka Dugyala, Eric S Nazareno, Erin Gilbert, Feng Li, Shahryar F Kianian, Brian J Steffenson, Peter N Dodds, Jana Sperschneider, Melania Figueroa
Advances in sequencing technologies as well as development of algorithms and workflows have made it possible to generate fully phased genome references for organisms with nonhaploid genomes such as dikaryotic rust fungi. To enable discovery of pathogen effectors and further our understanding of virulence evolution, we generated a chromosome-scale assembly for each of the 2 nuclear genomes of the oat crown rust pathogen, Puccinia coronata f. sp. avenae (Pca). This resource complements 2 previously released partially phased genome references of Pca, which display virulence traits absent in the isolate of historic race 203 (isolate Pca203) which was selected for this genome project...
July 29, 2022: G3: Genes—Genomes—Genetics
https://read.qxmd.com/read/35699741/meta-qtls-for-multiple-disease-resistance-involving-three-rusts-in-common-wheat-triticum-aestivum-l
#23
JOURNAL ARTICLE
Neeraj Pal, Irfat Jan, Dinesh Kumar Saini, Kuldeep Kumar, Anuj Kumar, P K Sharma, Sundip Kumar, H S Balyan, P K Gupta
In wheat, multiple disease resistance meta-QTLs (MDR-MQTLs) and underlying candidate genes for the three rusts were identified which may prove useful for development of resistant cultivars. Rust diseases in wheat are a major threat to global food security. Therefore, development of multiple disease-resistant cultivars (resistant to all three rusts) is a major goal in all wheat breeding programs worldwide. In the present study, meta-QTLs and candidate genes for multiple disease resistance (MDR) involving all three rusts were identified using 152 individual QTL mapping studies for resistance to leaf rust (LR), stem rust (SR), and yellow rust (YR)...
July 2022: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://read.qxmd.com/read/35321662/genomic-sequencing-of-thinopyrum-elongatum-chromosome-arm-7el-carrying-fusarium-head-blight-resistance-and-characterization-of-its-impact-on-the-transcriptome-of-the-introgressed-line-cs-7el
#24
JOURNAL ARTICLE
David Konkin, Ya-Chih Hsueh, Morgan Kirzinger, Marie Kubaláková, Aparna Haldar, Margaret Balcerzak, Fangpu Han, George Fedak, Jaroslav Doležel, Andrew Sharpe, Thérèse Ouellet
BACKGROUND: The tall wheatgrass species Thinopyrum elongatum carries a strong fusarium head blight (FHB) resistance locus located on the long arm of chromosome 7 (7EL) as well as resistance to leaf and stem rusts, all diseases with a significant impact on wheat production. Towards understanding the contribution of Th. elongatum 7EL to improvement of disease resistance in wheat, the genomic sequence of the 7EL fragment present in the wheat Chinese Spring (CS) telosomic addition line CS-7EL was determined and the contribution and impact of 7EL on the rachis transcriptome during FHB infection was compared between CS and CS-7EL...
March 23, 2022: BMC Genomics
https://read.qxmd.com/read/35009078/identification-of-quantitative-trait-loci-for-leaf-rust-and-stem-rust-seedling-resistance-in-bread-wheat-using-a-genome-wide-association-study
#25
JOURNAL ARTICLE
Alibek Zatybekov, Yuliya Genievskaya, Aralbek Rsaliyev, Akerke Maulenbay, Gulbahar Yskakova, Timur Savin, Yerlan Turuspekov, Saule Abugalieva
In recent years, leaf rust (LR) and stem rust (SR) have become a serious threat to bread wheat production in Kazakhstan. Most local cultivars are susceptible to these rusts, which has affected their yield and quality. The development of new cultivars with high productivity and LR and SR disease resistance, including using marker-assisted selection, is becoming an important priority in local breeding projects. Therefore, the search for key genetic factors controlling resistance in all plant stages, including the seedling stage, is of great significance...
December 27, 2021: Plants (Basel, Switzerland)
https://read.qxmd.com/read/34950843/complex-resistance-of-spring-and-winter-bread-wheat-lines-to-biotic-and-abiotic-stresses
#26
JOURNAL ARTICLE
I F Lapochkina, N R Gainullin, О A Baranova, N M Kovalenko, L A Marchenkova, O V Pavlova, O V O V Mitroshina
An original initial material of spring and winter bread wheat with group resistance to stem and leaf rust was developed using new donors of resistance to stem rust: winter soft wheat GT 96/90 (Bulgaria) and accession 119/4-06rw with genetic material of the species Triticum migushovae and (Aegilops speltoides and Secale cereale), respectively, a line of spring wheat 113/00i-4 obtained using the species Ae. triuncialis and T. kiharae, as well as spring accession 145/00i with genetic material of the species Ae...
November 2021: Vavilovskii Zhurnal Genetiki i Selektsii
https://read.qxmd.com/read/34950842/raise-and-characterization-of-a-bread-wheat-hybrid-line-tulaykovskaya-10-%C3%A3-saratovskaya-29-with-chromosome-6agi2-introgressed-from-thinopyrum-intermedium
#27
JOURNAL ARTICLE
Yu N Ivanova, K K Rosenfread, A I Stasyuk, E S Skolotneva, O G Silkova
Wheatgrass Thinopyrum intermedium is a source of agronomically valuable traits for common wheat. Partial wheat-wheatgrass amphidiploids and lines with wheatgrass chromosome substitutions are extensively used as intermediates in breeding programs. Line Agis 1 (6Agi2/6D) is present in the cultivar Tulaykovskaya 10 pedigree. Wheatgrass chromosome 6Agi2 carries multiple resistance to fungal diseases in various ecogeographical zones. In this work, we studied the transfer of chromosome 6Agi2 in hybrid populations Saratovskaya 29 × skaya 10 (S29 × T10) and Tulaykovskaya 10 × Saratovskaya 29 (T10 × S29)...
November 2021: Vavilovskii Zhurnal Genetiki i Selektsii
https://read.qxmd.com/read/34843039/phenotyping-and-validation-of-molecular-markers-associated-with-rust-resistance-genes-in-wheat-cultivars-in-egypt
#28
JOURNAL ARTICLE
Adel A Elshafei, Waled M El-Orabey, Fathallah B Fathallah, Ramadan M Esmail, Mohamed A Abou-Zeid
BACKGROUND: Thirteen Egyptian wheat cultivars were evaluated and characterized for adult plant resistance to yellow, leaf, and stem rusts. SSR markers linked to yellow, leaf and stem rust resistance genes were validated and subsequently used to identify wheat cultivars containing more than one rust resistance gene. RESULTS: Results of the molecular marker detection indicated that several genes, either alone or in different combinations, were present among the wheat cultivars, including Yr, Yr78 (stripe rust), Lr, Lr70 (leaf rust), Sr...
March 2022: Molecular Biology Reports
https://read.qxmd.com/read/34782883/wild-grasses-as-the-reservoirs-of-infection-of-rust-species-for-winter-soft-wheat-in-the-northern-caucasus
#29
JOURNAL ARTICLE
E I Gultyaeva, L A Bespalova, I B Ablova, E L Shaydayuk, Zh N Khudokormova, D R Yakovleva, Yu A Titova
Common winter wheat is the main grain crop cultivated in the North Caucasus. Rust disease damage is one of the factors limiting wheat productivity. There are three species of rust in the region: leaf (Puccinia triticina), stem (P. graminis) and stripe rust (P. striiformis), and their signif icance varies from year to year. The most common is leaf rust, but in the last decade the frequency of its epiphytotic development has signif icantly decreased. At the same time, an increase in the harmfulness of stripe rust (P...
October 2021: Vavilovskii Zhurnal Genetiki i Selektsii
https://read.qxmd.com/read/34767570/genetic-diversity-antifungal-evaluation-and-molecular-docking-studies-of-cu-chitosan-nanoparticles-as-prospective-stem-rust-inhibitor-candidates-among-some-egyptian-wheat-genotypes
#30
JOURNAL ARTICLE
Hanaa S Omar, Abdullah Al Mutery, Neama H Osman, Nour El-Houda A Reyad, Mohamed A Abou-Zeid
Wheat has a remarkable importance among cereals worldwide. Wheat stem and leaf rust constitute the main threats that destructively influence grain quality and yield production. Pursuing resistant cultivars and developing new genotypes including resistance genes is believed to be the most effective tool to overcome these challenges. This study is the first to use molecular markers to evaluate the genetic diversity of eighteen Egyptian wheat genotypes. Moreover, the molecular docking analysis was also used to assess the Cu-chitosan nanoparticle (CuChNp) treatment and its mode of action in disease control management...
2021: PloS One
https://read.qxmd.com/read/34661696/characterization-and-fine-mapping-of-a-lesion-mimic-mutant-lm5-with-enhanced-stripe-rust-and-powdery-mildew-resistance-in-bread-wheat-triticum-aestivum-l
#31
JOURNAL ARTICLE
Cong Li, Hang Liu, Jian Wang, Qi Pan, Yue Wang, Kunyan Wu, Peiying Jia, Yang Mu, Huaping Tang, Qiang Xu, Qiantao Jiang, Yaxi Liu, Pengfei Qi, Xiaojun Zhang, Lin Huang, Guoyue Chen, Jirui Wang, Yuming Wei, Youliang Zheng, Lulu Gou, Qifu Yao, Xiujin Lan, Jian Ma
A novel light intensity-dependent lesion mimic mutant with enhanced disease resistance was physiologically, biochemically, and genetically characterized, and the causative gene was fine mapped to a 1.28 Mbp interval containing 17 high-confidence genes. Lesion mimic mutants are ideal for studying disease resistance and programmed cell death photosynthesis in plants to improve crop yield. In this study, a novel light intensity-dependent lesion mimic mutant (MC21) was obtained from the wheat variety Chuannong16 (CN16) by ethyl methane sulfonate treatment...
October 18, 2021: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
https://read.qxmd.com/read/34451545/image-based-wheat-fungi-diseases-identification-by-deep-learning
#32
JOURNAL ARTICLE
Mikhail A Genaev, Ekaterina S Skolotneva, Elena I Gultyaeva, Elena A Orlova, Nina P Bechtold, Dmitry A Afonnikov
Diseases of cereals caused by pathogenic fungi can significantly reduce crop yields. Many cultures are exposed to them. The disease is difficult to control on a large scale; thus, one of the relevant approaches is the crop field monitoring, which helps to identify the disease at an early stage and take measures to prevent its spread. One of the effective control methods is disease identification based on the analysis of digital images, with the possibility of obtaining them in field conditions, using mobile devices...
July 21, 2021: Plants (Basel, Switzerland)
https://read.qxmd.com/read/34356486/capturing-multiple-disease-resistance-in-wheat-through-intergeneric-hybridization
#33
JOURNAL ARTICLE
George Fedak, Dawn Chi, Colin Hiebert, Tom Fetch, Brent McCallum, Allen Xue, Wenguang Cao
Derivatives from 4 species from the secondary gene pool of wheat-1 diploid ( T. monococcum ), 2 tetraploid ( T. carthlicum ; T. timopheevi ), and 1 hexaploid ( T. miguschovae )-were screened for resistance to Fusarium head blight, leaf rust, stem rust, and stripe rust. Where screening, genetic studies, and mapping were completed it was shown that all species carried resistance to multiple plant diseases. Some derived lines carried resistance to up to four different diseases. Where mapping was completed, it was shown that different diseases mapped to different chromosomes within any one accession...
July 8, 2021: Biology
https://read.qxmd.com/read/33912208/genome-wide-association-studies-reveal-all-stage-rust-resistance-loci-in-elite-durum-wheat-genotypes
#34
JOURNAL ARTICLE
Meriem Aoun, Matthew N Rouse, James A Kolmer, Ajay Kumar, Elias M Elias
Leaf rust, caused by Puccinia triticina ( Pt ), stripe rust caused by Puccinia striiformis f. sp. tritici ( Pst ), and stem rust caused by Puccinia graminis f. sp. tritici ( Pgt ) are major diseases to wheat production globally. Host resistance is the most suitable approach to manage these fungal pathogens. We investigated the phenotypic and genotypic structure of resistance to leaf rust, stem rust, and stripe rust pathogen races at the seedling stage in a collection of advanced durum wheat breeding lines and cultivars adapted to Upper Mid-West region of the United States...
2021: Frontiers in Plant Science
https://read.qxmd.com/read/33809650/comparison-of-genomic-prediction-methods-for-yellow-stem-and-leaf-rust-resistance-in-wheat-landraces-from-afghanistan
#35
JOURNAL ARTICLE
Muhammad Massub Tehseen, Zakaria Kehel, Carolina P Sansaloni, Marta da Silva Lopes, Ahmed Amri, Ezgi Kurtulus, Kumarse Nazari
Wheat rust diseases, including yellow rust (Yr; also known as stripe rust) caused by Puccinia striiformis Westend. f. sp. tritici , leaf rust (Lr) caused by Puccinia triticina Eriks. and stem rust (Sr) caused by Puccinia graminis Pres f. sp. tritici are major threats to wheat production all around the globe. Durable resistance to wheat rust diseases can be achieved through genomic-assisted prediction of resistant accessions to increase genetic gain per unit time. Genomic prediction (GP) is a promising technology that uses genomic markers to estimate genomic-assisted breeding values (GBEVs) for selecting resistant plant genotypes and accumulating favorable alleles for adult plant resistance (APR) to wheat rust diseases...
March 16, 2021: Plants (Basel, Switzerland)
https://read.qxmd.com/read/33728956/evidence-of-occurrence-of-barley-crown-rust-caused-by-puccinia-coronata-var-hordei-and-sexual-reproduction-of-the-pathogen-under-field-conditions-in-china
#36
JOURNAL ARTICLE
Xiaxia Tian, Qiang Yao, Zedong Zhang, Xiangrui Cheng, Jianfeng Qin, Zhensheng Kang, Jie Zhao
Crown rust of barley, caused by Puccinia coronata var. hordei , was first reported by Jin and Steffenson in 1992, and the fungus has been reported only in the United States and Hungary. In China, stripe, stem, and leaf rusts have been reported on barley, but not for crown rust. Recently, a sample (HZJ0004) of rust collected from barley in Qilian county in Qinghai, China, appeared different from the three rusts based on color, size, arrangements of uredinia and/or telia. Teliospores had crown-shaped appendages on the top...
October 2021: Plant Disease
https://read.qxmd.com/read/33534869/wheat-rust-epidemics-damage-ethiopian-wheat-production-a-decade-of-field-disease-surveillance-reveals-national-scale-trends-in-past-outbreaks
#37
JOURNAL ARTICLE
M Meyer, N Bacha, T Tesfaye, Y Alemayehu, E Abera, B Hundie, G Woldeab, B Girma, A Gemechu, T Negash, T Mideksa, J Smith, M Jaleta, D Hodson, C A Gilligan
Wheat rusts are the key biological constraint to wheat production in Ethiopia-one of Africa's largest wheat producing countries. The fungal diseases cause economic losses and threaten livelihoods of smallholder farmers. While it is known that wheat rust epidemics have occurred in Ethiopia, to date no systematic long-term analysis of past outbreaks has been available. We present results from one of the most comprehensive surveillance campaigns of wheat rusts in Africa. More than 13,000 fields have been surveyed during the last 13 years...
2021: PloS One
https://read.qxmd.com/read/33532691/modeling-multiple-phenotypes-in-wheat-using-data-driven-genomic-exploratory-factor-analysis-and-bayesian-network-learning
#38
JOURNAL ARTICLE
Mehdi Momen, Madhav Bhatta, Waseem Hussain, Haipeng Yu, Gota Morota
Inferring trait networks from a large volume of genetically correlated diverse phenotypes such as yield, architecture, and disease resistance can provide information on the manner in which complex phenotypes are interrelated. However, studies on statistical methods tailored to multidimensional phenotypes are limited, whereas numerous methods are available for evaluating the massive number of genetic markers. Factor analysis operates at the level of latent variables predicted to generate observed responses. The objectives of this study were to illustrate the manner in which data-driven exploratory factor analysis can map observed phenotypes into a smaller number of latent variables and infer a genomic latent factor network using 45 agro-morphological, disease, and grain mineral phenotypes measured in synthetic hexaploid wheat lines ( Triticum aestivum L ...
January 2021: Plant Direct
https://read.qxmd.com/read/33389532/molecular-breeding-for-rust-resistance-in-wheat-genotypes
#39
REVIEW
Adel A Elshafei, Mohamed I Motawei, Ramadan M Esmail, Abdullah A Al-Doss, Amal M Hussien, Eid I Ibrahim, Mohamed A Amer
Rusts are a group of major diseases that have an adverse effect on crop production. Those targeting wheat are found in three principal forms: leaf, stripe, and stem rust. Leaf rust causes foliar disease in wheat; in Egypt, this causes a significant annual yield loss. The deployment of resistant genotypes has proved to be a relatively economical and environmentally sustainable method of controlling the disease. Gene pyramiding can be performed using traditional breeding techniques. Additionally, pathotypes can be introduced to examine specific leaf rust genes, or the breeder may conduct more complex breeding methods...
January 3, 2021: Molecular Biology Reports
https://read.qxmd.com/read/33184704/the-aegilops-ventricosa-2n-v-s-segment-in-bread-wheat-cytology-genomics-and-breeding
#40
JOURNAL ARTICLE
Liangliang Gao, Dal-Hoe Koo, Philomin Juliana, Trevor Rife, Daljit Singh, Cristiano Lemes da Silva, Thomas Lux, Kevin M Dorn, Marshall Clinesmith, Paula Silva, Xu Wang, Manuel Spannagl, Cecile Monat, Bernd Friebe, Burkhard Steuernagel, Gary J Muehlbauer, Sean Walkowiak, Curtis Pozniak, Ravi Singh, Nils Stein, Martin Mascher, Allan Fritz, Jesse Poland
The first cytological characterization of the 2Nv S segment in hexaploid wheat; complete de novo assembly and annotation of 2Nv S segment; 2Nv S frequency is increasing 2Nv S and is associated with higher yield. The Aegilops ventricosa 2Nv S translocation segment has been utilized in breeding disease-resistant wheat crops since the early 1990s. This segment is known to possess several important resistance genes against multiple wheat diseases including root knot nematode, stripe rust, leaf rust and stem rust...
November 12, 2020: TAG. Theoretical and Applied Genetics. Theoretische und Angewandte Genetik
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