keyword
https://read.qxmd.com/read/38582263/atpr-induces-acute-promyelocytic-leukemia-cells-differentiation-and-cycle-arrest-via-the-lncrna-concr-ddx11-pml-rar%C3%AE-signaling-axis
#21
JOURNAL ARTICLE
Shen Liu, Wenjing Zhan, Xiong He, Mengjia Hao, Wenwen Shen, Xiaoyue Zhang, Meng Wang, Zihan Li, Ruirui Hou, Ziyao Ou, Yubin Feng, Feihu Chen
Acute promyelocytic leukemia (APL) is a type of acute myeloid leukemia (AML) with a high mortality rate, and the production of PML-RARα fusion protein is the cause of its pathogenesis. Our group has synthesized a novel compound, 4-amino-2-trifluoromethyl-phenyl retinate (ATPR), by structural modification of All-trans retinoic acid (ATRA), which has strong cell differentiation-inducing effects and inhibits the expression of PML-RARα. In this study, acute promyelocytic leukemia NB4 cells before and after ATPR induction were analyzed by whole transcriptome microarray, and the expression of lncRNA CONCR was found to be significantly downregulated...
April 4, 2024: Gene
https://read.qxmd.com/read/38579641/unveiling-the-neuroprotection-effects-of-volvalerenic-acid-a-mitochondrial-fusion-induction-via-ido1-mediated-stat3-opa1-signaling-pathway
#22
JOURNAL ARTICLE
Shanchun Ge, Lei Wang, Chang Jin, Haifeng Xie, Guoping Zheng, Zhengguo Cui, Chaofeng Zhang
BACKGROUND: Ischemic stroke is a leading cause of death and long-term disability worldwide. Studies have suggested that cerebral ischemia induces massive mitochondrial damage. Valerianic acid A (VaA) is the main active ingredient of valerianic acid with neuroprotective activity. PURPOSE: This study aimed to investigate the neuroprotective effects of VaA with ischemic stroke and explore the underlying mechanisms. METHOD: In this study, we established the oxygen-glucose deprivation and reperfusion (OGD/R) cell model and the middle cerebral artery occlusion and reperfusion (MCAO/R) animal model in vitro and in vivo...
March 20, 2024: Phytomedicine
https://read.qxmd.com/read/38573429/membrane-based-inverse-transition-purification-facilitates-a-rapid-isolation-of-various-spider-silk-elastin-like-polypeptide-fusion-proteins-from-extracts-of-transgenic-tobacco
#23
JOURNAL ARTICLE
H M Gruchow, P Opdensteinen, J F Buyel
Plants can produce complex pharmaceutical and technical proteins. Spider silk proteins are one example of the latter and can be used, for example, as compounds for high-performance textiles or wound dressings. If genetically fused to elastin-like polypeptides (ELPs), the silk proteins can be reversibly precipitated from clarified plant extracts at moderate temperatures of ~ 30 °C together with salt concentrations > 1.5 M, which simplifies purification and thus reduces costs...
April 4, 2024: Transgenic Research
https://read.qxmd.com/read/38571499/-nup214-fusion-genes-in-acute-leukemias-genetic-characterization-of-rare-cases
#24
JOURNAL ARTICLE
Marta Brunetti, Kristin Andersen, Signe Spetalen, Andrea Lenartova, Liv Toril Nygård Osnes, Helen Vålerhaugen, Sverre Heim, Francesca Micci
INTRODUCTION: Alterations of the NUP214 gene (9q34) are recurrent in acute leukemias. Rearrangements of chromosomal band 9q34 targeting this locus can be karyotypically distinct, for example t(6;9)(p22;q34)/ DEK::NUP214 , or cryptic, in which case no visible change of 9q34 is seen by chromosome banding. METHODS: We examined 9 cases of acute leukemia with NUP214 rearrangement by array Comparative Genomic Hybridization (aCGH), reverse-transcription polymerase chain reaction (RT-PCR), and cycle sequencing/Sanger sequencing to detect which fusion genes had been generated...
2024: Frontiers in Oncology
https://read.qxmd.com/read/38561473/post-therapy-emergence-of-an-nbn-reversion-mutation-in-a-patient-with-pancreatic-acinar-cell-carcinoma
#25
JOURNAL ARTICLE
Meredith S Pelster, Ian M Silverman, Joseph D Schonhoft, Adrienne Johnson, Pier Selenica, Danielle Ulanet, Victoria Rimkunas, Jorge S Reis-Filho
Pancreatic acinar cell carcinoma (PACC) is a rare form of pancreatic cancer that commonly harbors targetable alterations, including activating fusions in the MAPK pathway and loss-of-function (LOF) alterations in DNA damage response/homologous recombination DNA repair-related genes. Here, we describe a patient with PACC harboring both somatic biallelic LOF of NBN and an activating NTRK1 fusion. Upon disease progression following 13 months of treatment with folinic acid, fluorouracil, irinotecan, and oxaliplatin (FOLFIRINOX), genomic analysis of a metastatic liver biopsy revealed the emergence of a novel reversion mutation restoring the reading frame of NBN...
April 1, 2024: NPJ Precision Oncology
https://read.qxmd.com/read/38559103/competitive-assembly-resolves-the-stoichiometry-of-essential-proteins-in-infectious-hiv-1-virions
#26
Haley Durden, Benjamin Preece, Rodrigo Gallegos, Ipsita Saha, Brian MacArthur, Abby Petersen, Wiley Peppel, Saveez Saffarian
UNLABELLED: During assembly on the plasma membrane, HIV-1 virions incorporate Gag-Pol as well as gp120/gp41 trimers. The Pol region consists of protease, reverse transcriptase and integrase precursors which are essential enzymes required for maturation, reverse transcription, and integration of the viral genome in the next host. gp120/gp41 trimers catalyze the fusion of the virion with its next host. Only a fraction of released virions are infectious. The stoichiometry of gp120/gp41 and Gag-Pol proteins in HIV virions was previously measured using cryotomography and ratiometric protein analysis, but what is the stoichiometry of these proteins in infectious virions remained to be determined...
March 12, 2024: bioRxiv
https://read.qxmd.com/read/38555831/remarkable-recovery-of-lower-extremity-motor-impairment-in-degenerative-disc-disease-after-percutaneous-laser-disc-decompression-combined-with-umbilical-cord-derived-mesenchymal-stem-cells-implantation-a-case-report
#27
Ahmad Jabir Rahyussalim, Anindyo Abshar Andar, Anissa Feby Canintika, Dheasitta Andini Putri, Tri Kurniawati
INTRODUCTION AND IMPORTANCE: Degenerative disc disease (DDD) is a common cause of low back pain, often leading to significant discomfort for patients. Current treatment options such as spinal fusion and physical therapy focus on symptom management rather than addressing the underlying degeneration. Percutaneous laser disc decompression (PLDD) has shown efficacy in treating radicular pain associated with disc herniation. However, there is a growing interest in utilizing tissue engineering approaches to reverse the pathological process of DDD...
March 24, 2024: International Journal of Surgery Case Reports
https://read.qxmd.com/read/38555701/consistency-label-activated-region-generating-network-for-weakly-supervised-medical-image-segmentation
#28
JOURNAL ARTICLE
Wei Du, Yongkang Huo, Rixin Zhou, Yu Sun, Shiyi Tang, Xuan Zhao, Ying Li, Gaoyang Li
The current methods of auto-segmenting medical images are limited due to insufficient and ambiguous pathonmorphological labeling. In clinical practice, rough classification labels (such as disease or normal) are more commonly used than precise segmentation masks. However, there is still much to be explored regarding utilizing these weak clinical labels to accurately determine the lesion mask and guide medical image segmentation. In this paper, we proposed a weakly supervised medical image segmentation model to directly generate the lesion mask through a class activation map (CAM) guided cycle-consistency label-activated region transferring network...
March 26, 2024: Computers in Biology and Medicine
https://read.qxmd.com/read/38553845/the-application-of-targeted-rna-sequencing-for-the-analysis-of-fusion-genes-gene-mutations-ikzf1-intragenic-deletion-and-crlf2-overexpression-in-acute-lymphoblastic-leukemia
#29
JOURNAL ARTICLE
Zhenyu Zhang, Yu Jing, Bin Chen, Hong Zhang, Tuo Liu, Shuran Dong, Lei Zhang, Xiaoyan Yan, Shaobin Yang, Long Chen, Yani Lin, Kun Ru
INTRODUCTION: Acute lymphoblastic leukemia (ALL) is characterized by highly genetic heterogeneity, owing to recurrent fusion genes, gene mutations, intragenic deletion, and gene overexpression, which poses significant challenges in clinical detection. RNA sequencing (RNA-seq) is a powerful tool for detecting multiple genetic abnormalities, especially cryptic gene rearrangements, in a single test. METHODS: Sixty samples (B-ALL, n = 49; T-ALL, n = 9; mixed phenotype acute leukemia (MPAL), n = 2) and 20 controls were analyzed by targeted RNA-seq panel of 507 genes developed by our lab...
March 29, 2024: International Journal of Laboratory Hematology
https://read.qxmd.com/read/38549229/application-of-prime-editing-system-to-introduce-tp53-r248q-hotspot-mutation-in-acute-lymphoblastic-leukemia-cell-line
#30
JOURNAL ARTICLE
Thao Nguyen, Tomomi Aida, Yuka Iijima-Yamashita, Minori Tamai, Akiko Nagamachi, Keiko Kagami, Chiaki Komatsu, Shin Kasai, Koshi Akahane, Kumiko Goi, Toshiya Inaba, Masashi Sanada, Takeshi Inukai
In childhood acute lymphoblastic leukemia (ALL), TP53 gene mutation is associated with chemoresistance in a certain population of relapsed cases. To directly verify the association of TP53 gene mutation with chemoresistance of relapsed childhood ALL cases and improve their prognosis, the development of appropriate human leukemia models having TP53 mutation in the intrinsic gene is required. Here, we sought to introduce R248Q hotspot mutation into the intrinsic TP53 gene in an ALL cell line, 697, by applying a prime editing (PE) system, which is a versatile genome editing technology...
March 28, 2024: Cancer Science
https://read.qxmd.com/read/38544947/hybrid-polymer-salogels-for-reversible-entrapment-of-salt-hydrate-based-thermal-energy-storage-materials
#31
REVIEW
Kartik Kumar Rajagopalan, Sebastian Haney, Patrick J Shamberger, Svetlana A Sukhishvili
One of the challenges preventing wide use of inorganic salt hydrate phase change materials (PCMs) is their low viscosity above their melting point, leading to leakage, phase segregation, and separation from heat exchanger surfaces in thermal management applications. The development of a broad strategy for using polymers that provide tunable, temperature-reversible shape stabilization of a variety of salt hydrates by using the lowest possible polymer concentrations is hindered by differences in solubility and gelation behavior of polymers with change in the type of ion...
March 22, 2024: ACS Appl Eng Mater
https://read.qxmd.com/read/38539495/acute-promyelocytic-leukemia-review-of-complications-related-to-all-trans-retinoic-acid-and-arsenic-trioxide-therapy
#32
REVIEW
Alexandra Ghiaur, Cristina Doran, Mihnea-Alexandru Gaman, Bogdan Ionescu, Aurelia Tatic, Mihaela Cirstea, Maria Camelia Stancioaica, Roxana Hirjan, Daniel Coriu
The hallmark of acute promyelocytic leukemia (APL) is the presence of the characteristic fusion transcript of the promyelocytic leukemia gene with the retinoic acid receptor α gene (PML::RARA). The PML::RARA fusion is a molecular target for all-trans retinoic acid (ATRA) and arsenic trioxide (ATO). Therapies based on ATRA plus ATO have excellent outcomes in terms of complete remission rates, overall survival, and achievement of deep and durable molecular responses with a very low incidence of relapse...
March 15, 2024: Cancers
https://read.qxmd.com/read/38534823/research-on-microgrid-optimal-dispatching-based-on-a-multi-strategy-optimization-of-slime-mould-algorithm
#33
JOURNAL ARTICLE
Yi Zhang, Yangkun Zhou
In order to cope with the problems of energy shortage and environmental pollution, carbon emissions need to be reduced and so the structure of the power grid is constantly being optimized. Traditional centralized power networks are not as capable of controlling and distributing non-renewable energy as distributed power grids. Therefore, the optimal dispatch of microgrids faces increasing challenges. This paper proposes a multi-strategy fusion slime mould algorithm (MFSMA) to tackle the microgrid optimal dispatching problem...
February 23, 2024: Biomimetics
https://read.qxmd.com/read/38532197/expression-of-fibroblast-growth-factor-receptor-2-fgfr2-in-combined-hepatocellular-cholangiocarcinoma-and-intrahepatic-cholangiocarcinoma-clinicopathological-study
#34
JOURNAL ARTICLE
Motoko Sasaki, Yasunori Sato, Yasuni Nakanuma
Genetic alterations including fusions in fibroblast growth factor receptor 2 (FGFR2) are detected in 10-20% of intrahepatic cholangiocarcinoma (iCCA), and FGFR2 inhibitors are effective for the treatment of iCCA. We examined a prevalence of FGFR2 genetic alterations and their clinicopathological significance in combined hepatocellular-cholangiocarcinoma (cHCC-CCA). FGFR2 expression, which is a surrogate marker for FGFR2 genetic alterations, was immunohistochemically assessed in the liver sections from 75 patients with cHCC-CCA, 35 with small duct-type iCCA, 30 with large duct-type iCCA, and 35 with hepatocellular carcinoma (HCC)...
March 27, 2024: Virchows Archiv: An International Journal of Pathology
https://read.qxmd.com/read/38525319/-ret-fusion-testing-in-patients-with-nsclc-the-reting-study
#35
JOURNAL ARTICLE
Esther Conde, Susana Hernandez, Jose Luis Rodriguez Carrillo, Rebeca Martinez, Marta Alonso, Daniel Curto, Beatriz Jimenez, Alejandra Caminoa, Amparo Benito, Pilar Garrido, Sergi Clave, Edurne Arriola, Isabel Esteban-Rodriguez, Javier De Castro, Irene Sansano, Enriqueta Felip, Federico Rojo, Manuel Dómine, Ihab Abdulkader, Jorge Garcia-Gonzalez, Cristina Teixido, Noemi Reguart, Desamparados Compañ, Amelia Insa, Nuria Mancheño, Sarai Palanca, Oscar Juan-Vidal, Nuria Baixeras, Ernest Nadal, Maria Cebollero, Antonio Calles, Paloma Martin, Clara Salas, Mariano Provencio, Ignacio Aranda, Bartomeu Massuti, Laura Lopez-Vilaro, Margarita Majem, Luis Paz-Ares, Fernando Lopez-Rios
INTRODUCTION: RET inhibitors with impressive overall response rates are now available for patients with NSCLC, yet the identification of RET fusions remains a difficult challenge. Most guidelines encourage the upfront use of next-generation sequencing (NGS), or alternatively, fluorescence in situ hybridization (FISH) or reverse transcriptase-polymerase chain reaction (RT-PCR) when NGS is not possible or available. Taken together, the suboptimal performance of single-analyte assays to detect RET fusions, although consistent with the notion of encouraging universal NGS, is currently widening some of the clinical practice gaps in the implementation of predictive biomarkers in patients with advanced NSCLC...
April 2024: JTO clinical and research reports
https://read.qxmd.com/read/38520650/pharmacological-advances-in-anti-retroviral-therapy-for-human-immunodeficiency-virus-1-infection-a-comprehensive-review
#36
REVIEW
Nursyuhada Azzman, Muhammad Shoaib Ali Gill, Sharifah Syed Hassan, Frauke Christ, Zeger Debyser, Wan Ahmad Syazani Mohamed, Nafees Ahemad
The discovery of anti-retroviral (ARV) drugs over the past 36 years has introduced various classes, including nucleoside/nucleotide reverse transcriptase inhibitors, non-nucleoside reverse transcriptase inhibitors, protease inhibitor, fusion, and integrase strand transfer inhibitors inhibitors. The introduction of combined highly active anti-retroviral therapies in 1996 was later proven to combat further ARV drug resistance along with enhancing human immunodeficiency virus (HIV) suppression. As though the development of ARV therapies was continuously expanding, the variation of action caused by ARV drugs, along with its current updates, was not comprehensively discussed, particularly for HIV-1 infection...
March 2024: Reviews in Medical Virology
https://read.qxmd.com/read/38510794/the-dual-angiogenesis-effects-via-nrf2-ho-1-signaling-pathway-of-melatonin-nanocomposite-scaffold-on-promoting-diabetic-bone-defect-repair
#37
JOURNAL ARTICLE
Tingting Chen, Zimei Wu, Qiaodan Hou, Yixin Mei, Kunkun Yang, Jing Xu, Lin Wang
PURPOSE: Given the escalating prevalence of diabetes, the demand for specific bone graft materials is increasing, owing to the greater tendency towards bone defects and more difficult defect repair resulting from diabetic bone disease (DBD). Melatonin (MT), which is known for its potent antioxidant properties, has been shown to stimulate both osteogenesis and angiogenesis. METHODS: MT was formulated into MT@PLGA nanoparticles (NPs), mixed with sodium alginate (SA) hydrogel, and contained within a 3D printing polycaprolactone/β-Tricalcium phosphate (PCL/β-TCP) scaffold...
2024: International Journal of Nanomedicine
https://read.qxmd.com/read/38509077/mettl3-dependent-m-6-a-modification-of-psen1-mrna-regulates-craniofacial-development-through-the-wnt-%C3%AE-catenin-signaling-pathway
#38
JOURNAL ARTICLE
Lan Ma, Xi Zhou, Siyue Yao, Xinyu Zhang, Ji Mao, Barbara Vona, Liwen Fan, Shu Lou, Dandan Li, Lin Wang, Yongchu Pan
Craniofacial malformations, often associated with syndromes, are prevalent birth defects. Emerging evidence underscores the importance of m6 A modifications in various bioprocesses such as stem cell differentiation, tissue development, and tumorigenesis. Here, in vivo, experiments with zebrafish models revealed that mettl3-knockdown embryos at 144 h postfertilization exhibited aberrant craniofacial features, including altered mouth opening, jaw dimensions, ethmoid plate, tooth formation and hypoactive behavior...
March 20, 2024: Cell Death & Disease
https://read.qxmd.com/read/38500116/a-novel-intronic-tcof1-pathogenic-variant-in-a-chinese-family-with-treacher-collins-syndrome
#39
JOURNAL ARTICLE
Haojie Sun, Xinda Xu, Binjun Chen, Yanmei Wang, Jihan Lyu, Luo Guo, Yasheng Yuan, Dongdong Ren
BACKGROUND: Treacher Collins syndrome (TCS; OMIM 154500) is a craniofacial developmental disorder. METHODS: To investigate the genetic features of a four-generation Chinese family with TCS, clinical examinations, hearing tests, computed tomography, whole-exome sequencing (WES), Sanger sequencing, reverse transcription (RT)-PCR, and the Minigene assay were performed. RESULTS: The probands, an 11-year-old male and his cousin exhibited typical clinical manifestations of TCS including conductive hearing loss, downward slanting palpebral fissures, and mandibular hypoplasia...
March 18, 2024: BMC Medical Genomics
https://read.qxmd.com/read/38497249/impact-of-sugammadex-and-neostigmine-on-outcome-after-major-orthopaedic-surgery-a-population-based-analysis
#40
JOURNAL ARTICLE
Crispiana Cozowicz, Haoyan Zhong, Jashvant Poeran, Alex Illescas, Jiabin Liu, Lazaros A Poultsides, Vassilis Athanassoglou, Stavros G Memtsoudis
BACKGROUND: Residual neuromuscular blockade after surgery remains a major concern given its association with pulmonary complications. However, current clinical practices with and the comparative impact on perioperative risk of various reversal agents remain understudied. OBJECTIVE: We investigated the use of sugammadex and neostigmine in the USA, and their impact on postoperative complications by examining national data. DESIGN: This population-based retrospective study used national Premier Healthcare claims data...
March 18, 2024: European Journal of Anaesthesiology
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