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https://www.readbyqxmd.com/read/28109206/proposal-of-mucilaginibacter-galii-sp-nov-isolated-from-leaves-of-galium-album
#1
Ebru L Aydogan, Hans-Jürgen Busse, Gerald Moser, Christoph Müller, Peter Kämpfer, Stefanie P Glaeser
A pale pink pigmented, Gram-stain-negative, rod-shaped, non-spore forming bacterial strain, PP-F2F-G47T, was isolated from the phyllosphere of the herbaceous plant Galium album. Phylogenetic analysis based on nearly full-length 16S rRNA gene sequence showed highest sequence similarity to type strains of the species Mucilaginibacter daejeonensis (96.2 %), Mucilaginibacter dorajii (95.7 %), and Mucilaginibacter phyllosphaerae (95.5 %). 16S rRNA gene-sequence similarities to all other type strains were below 95...
January 19, 2017: International Journal of Systematic and Evolutionary Microbiology
https://www.readbyqxmd.com/read/28109168/integrated-omics-analysis-of-specialized-metabolism-in-medicinal-plants
#2
Amit Rai, Kazuki Saito, Mami Yamazaki
Medicinal plants are the rich source of highly diverse specialized metabolites with important pharmacological properties. Until recently, plant biologists were limited in their approach to explore biosynthetic pathways of these metabolites, mainly due to the scarcity of plant genomics resources. Recent advancements in the high-throughput large-scale analytical methods have enabled plant biologists to discover biosynthetic pathways for important plant-based medicinal metabolites. Reduced cost to generate omics datasets, and the development of computational tools for their analysis and integration have led to the elucidation of biosynthetic pathways of several plant origin bio-active metabolites...
January 21, 2017: Plant Journal: for Cell and Molecular Biology
https://www.readbyqxmd.com/read/28109135/assessing-the-hydroxyl-radical-and-volatilization-roles-in-the-aquatic-fate-estimations-of-sulfur-heterocycles-dibenzothiophene-derivatives
#3
Parichehr Saranjampour, Kevin L Armbrust, Brian D Marx
Polycyclic aromatic sulfur heterocycles (PASHs) and their alkyl derivatives can be released into aquatic systems via crude oil spills or via runoff from petroleum treated areas such as asphalt. Dibenzothiophene (DBT) and its derivatives, C1-DBT, C2-DBT, and C4-DBT were chosen as model compounds to investigate the relative impact of volatilization and hydroxyl radical degradation on estimates of their overall dissipation after entry into aquatic ecosystems as a function of depth using the Exposure Analysis Modeling System (EXAMS)...
January 21, 2017: Environmental Toxicology and Chemistry
https://www.readbyqxmd.com/read/28109134/a-novel-mitochondria-targeting-fluorescent-probe-as-the-monitor-of-hydrogen-sulfide-in-living-cells
#4
Wei Shi, Miaobo Pan, Hao Qiang, Qianqian Qiu, Wenlong Huang, Haiyan Lin, Hai Qian, Liang Ge
A novel mitochondria targeting fluorescent probe compound S-N3 as the monitor of Hydrogen Sulfide (H2 S) in living cells has been designed and synthesized in this paper. This article contained the chemosynthesis and some studies on bioactivity of the target compound in living cells. Compound S-N3 is easy to synthesize and can remain stable under the effect of pH, system and photo. In additional, it shows low cytotoxicity in cell imaging. And it can react with H2 S highly selective in PBS or FBS solution, which would cause the obvious increase of fluorescence intensity...
January 21, 2017: Chemical Biology & Drug Design
https://www.readbyqxmd.com/read/28109130/identification-of-promising-dna-gyrb-inhibitors-for-tuberculosis-using-pharmacophore-based-virtual-screening-molecular-docking-and-molecular-dynamics-studies
#5
Md Ataul Islam, Tahir S Pillay
In the current study, we searched for potential DNA GyrB inhibitors using pharmacophore-based virtual screening followed by molecular docking and molecular dynamics simulation approaches. For this purpose, a set of 248 DNA GyrB inhibitors were collected from the literature and a well-validated pharmacophore model was generated. The best pharmacophore model explained that two each of hydrogen bond acceptor and hydrophobicity were critical for inhibition of DNA GyrB. Good statistical results of the pharmacophore model indicated that the model was robust in nature...
January 21, 2017: Chemical Biology & Drug Design
https://www.readbyqxmd.com/read/28109088/antioxidant-evaluation-and-composition-analysis-of-extracts-from-fuzhuan-brick-tea-and-its-comparison-with-two-instant-tea-products
#6
Qing-An Zhang, Xiao-Li Zhang, Yan-Ying Yan, Xue-Hui Fan
In this paper, the antioxidant capacities and compositions of two commercialized tea products and extracts from Fuzhuanbrick tea (FBT) were investigated using three HPLC methods comparing the retention times of injected standards. Principal component analysis and DPPH-spiking HPLC analysis were used to analyze correlation between antioxidant capacity and the compounds detected to screen which compounds contribute to antioxidant activity. Results indicated that all samples contained high amounts of polysaccharides, phenols, and flavonoids and had good antioxidant activity and a high level of correlation among them...
January 21, 2017: Journal of AOAC International
https://www.readbyqxmd.com/read/28109063/chemical-variability-antioxidant-and-antifungal-activities-of-essential-oils-and-hydrosol-extract-of-calendula-arvensis-l-from-western-algeria
#7
Rania Belabbes, Mohammed El Amine Dib, Nassim Djabou, Faiza Ilias, Boufeldja Tabti, Jean Costa, Alain Muselli
The chemical composition of the essential oils and hydrosol extract from aerial parts of Calendula arvensis L. was investigated using GC-FID and GC/MS. Intra-species variations of the chemical compositions of essential oils from 18 Algerian sample locations were investigated using statistical analysis. Chemical analysis allowed the identification of fifty-three compounds amounting to 92.3-98.5% with yields varied of 0.09-0.36% and the main compounds were zingiberenol 1 (8.7-29.8%), eremoligenol (4.2-12.5%), β-curcumene (2...
January 21, 2017: Chemistry & Biodiversity
https://www.readbyqxmd.com/read/28109049/production-of-the-antibiotic-secondary-metabolite-solanapyrone-a-by-the-fungal-plant-pathogen-ascochyta-rabiei-during-fruiting-body-formation-in-saprobic-growth
#8
Wonyong Kim, Jeong-Jin Park, Frank M Dugan, Tobin L Peever, David R Gang, George Vandemark, Weidong Chen
Fungi are noted producers of a diverse array of secondary metabolites, many of which are of pharmacological importance. However, the biological roles of the vast majority of these molecules during the fungal life cycle in nature remain elusive. Solanapyrones are polyketide-derived secondary metabolites produced by diverse fungal species including the plant pathogen Ascochyta rabiei. This molecule was originally thought to function as a phytotoxin facilitating pathogenesis of A. rabiei. Chemical profiling and gene expression studies showed that solanapyrone A was specifically produced during saprobic, but not parasitic growth of A...
January 21, 2017: Environmental Microbiology
https://www.readbyqxmd.com/read/28109035/competitive-benzyl-cation-transfer-proton-transfer-collision-induced-mass-spectrometric-fragmentation-of-protonated-n-n-dibenzylaniline
#9
Ge Ma, Gongye Liu, Shanshan Shen, Yunfeng Chai, Lei Yue, Shunping Zhao, Yuanjiang Pan
Collision-induced dissociation of protonated N,N-dibenzylaniline was investigated by electrospray tandem mass spectrometry. Various fragmentation pathways were dominated by benzyl cation and proton transfer. Benzyl cation transfers from the initial site (nitrogen) to benzylic phenyl or aniline phenyl ring. The benzyl cations transfer to the two different sites and both result in the benzene loss combined with 1,3-H shift. In addition, after the benzyl cation transfers to the benzylic phenyl ring, 1,2-H shift and 1,4-H shift proceed competitively to trigger the diphenylmethane loss and aniline loss respectively...
January 21, 2017: Journal of Mass Spectrometry: JMS
https://www.readbyqxmd.com/read/28108920/biochemical-and-physiological-responses-of-halophilic-nanophytoplankton-dunaliella-salina-from-exposure-to-xeno-estrogen-17%C3%AE-ethinylestradiol
#10
Dalel Belhaj, Khaled Athmouni, Doniez Frikha, Monem Kallel, Abdelfattah El Feki, Sami Maalej, John L Zhou, Habib Ayadi
The environmental impacts of various pollutants on the entire levels of organisms are under investigation. Among these pollutants, endocrine-disrupting compounds (EDCs) present a serious hazard, even though the environmental significance of these compounds remains basically unknown. To drop some light on this field, we assessed the effects of a 11-day exposure of 17α-ethinylestradiol (EE2) on the growth, metabolic content, antioxidant response, oxidative stress, and genetic damage of Dunaliella salina, isolated from Tunisian biotopes...
January 20, 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28108916/oxidation-of-danofloxacin-by-free-chlorine-kinetic-study-structural-identification-of-by-products-by-lc-ms-ms-and-potential-toxicity-of-by-products-using-in-silico-test
#11
Montaha Yassine, Ahmad Rifai, Samah Doumyati, Aurélien Trivella, Patrick Mazellier, Hélène Budzinski, Mohamad Al Iskandarani
: In this study, we aimed to investigate the kinetics and the mechanism of reaction of the fluoroquinolone antibacterial danofloxacin (DANO) by free available chlorine (FAC) during water chlorination process. Kinetic study was thus performed at pH 7.2, 20 °C in the presence of an excess of total chlorine. Under these experimental conditions, a second-order reaction rate constant (first-order relative to DANO concentration and first-order relative to FAC concentration) was evaluated to k~1446 M(-1) s(-1)...
January 20, 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28108896/pharmacophore-based-screening-and-drug-repurposing-exemplified-on-glycogen-synthase-kinase-3-inhibitors
#12
Luminita Crisan, Sorin Avram, Liliana Pacureanu
The current study was conducted to elaborate a novel pharmacophore model to accurately map selective glycogen synthase kinase-3 (GSK-3) inhibitors, and perform virtual screening and drug repurposing. Pharmacophore modeling was developed using PHASE on a data set of 203 maleimides. Two benchmarking validation data sets with focus on selectivity were assembled using ChEMBL and PubChem GSK-3 confirmatory assays. A drug repurposing experiment linking pharmacophore matching with drug information originating from multiple data sources was performed...
January 21, 2017: Molecular Diversity
https://www.readbyqxmd.com/read/28108840/differences-in-monoterpene-biosynthesis-and-accumulation-in-pistacia-palaestina-leaves-and-aphid-induced-galls
#13
Karin Rand, Einat Bar, Matan Ben Ari, Rachel Davidovich-Rikanati, Natalia Dudareva, Moshe Inbar, Efraim Lewinsohn
Certain insect species can induce gall formation on numerous plants species. Although the mechanism of gall development is largely unknown, it is clear that insects manipulate their hosts' anatomy, physiology, and chemistry for their own benefit. It is well known that insect-induced galls often contain vast amounts of plant defensive compounds as compared to non-colonized tissues, but it is not clear if defensive compounds can be produced in situ in the galled tissues. To answer this question, we analyzed terpene accumulation patterns and possible independent biosynthetic potential of galls induced by the aphid Baizongia pistaciae L...
January 20, 2017: Journal of Chemical Ecology
https://www.readbyqxmd.com/read/28108741/metabolism-toxicity-and-anticancer-activities-of-arsenic-compounds
#14
Islam Khairul, Qian Qian Wang, Yu Han Jiang, Chao Wang, Hua Naranmandura
A variety of studies indicated that inorganic arsenic and its methylated metabolites have paradoxical effects, namely, carcinogenic and anticancer effects. Epidemiological studies have shown that long term exposure to arsenic can increase the risk of cancers of lung, skin or bladder in man, which is probably associated with the arsenic metabolism. In fact, the enzymatic conversion of inorganic arsenic by Arsenic (+3 oxidation state) methyltransferase (AS3MT) to mono- and dimethylated arsenic species has long been considered as a major route for detoxification...
January 18, 2017: Oncotarget
https://www.readbyqxmd.com/read/28108624/inflammatory-molecule-psgl-1-deficiency-activates-macrophages-to-promote-colorectal-cancer-growth-through-nf-kappab-signaling
#15
Jiangchao Li, Zeqi Zhou, Xiaohan Zhang, Li Zheng, Dan He, Yuxiang Ye, Qian-Qian Zhang, Cui-Ling Qi, Xiao-Dong He, Chen Yu, Chun-Kui Shao, Liang Qiao, Lijing Wang
: P-selectin glycoprotein ligand 1 (SELPLG/PSGL-1) is an inflammatory molecule that is functionally related to immune cell differentiation and leukocyte mobilization. However, the role of PSGL-1 in tumor development remains unknown. Therefore, this study investigates the mechanistic role of PSGL-1 in the development of intestinal tumors in colorectal cancer (CRC). ApcMin/+ mice, are highly susceptible to spontaneous intestinal adenoma formation, and were crossbred with PSGL1-null mice to generate compound transgenic mice with a ApcMin/+;PSGL-1-/- genotype...
January 20, 2017: Molecular Cancer Research: MCR
https://www.readbyqxmd.com/read/28108382/new-xanthones-and-cytotoxic-constituents-from-garcinia-mangostana-fruit-hulls-against-human-hepatocellular-breast-and-colorectal-cancer-cell-lines
#16
Gamal A Mohamed, Ahmed M Al-Abd, Ali M El-Halawany, Hossam M Abdallah, Sabrin R M Ibrahim
ETHNOPHARMACOLOGICAL RELEVANCE: Cancer has proceeded to surpass one of the most chronic illnesses to be the major cause of mortality in both the developing and developed world. Garcinia mangostana L. (mangosteen, family Guttiferae) known as the queen of fruits, is one of the most popular tropical fruits. It is cultivated in Southeast Asian countries: Malaysia, Indonesia, Sri Lanka, Burma, Thailand, and Philippines. Traditionally, numerous parts of G. mangostana have been utilized to treat various ailments such as abdominal pain, haemorrhoids, food allergies, arthritis, leucorrhoea, gonorrhea, diarrhea, dysentery, wound infection, suppuration, and chronic ulcer...
January 17, 2017: Journal of Ethnopharmacology
https://www.readbyqxmd.com/read/28108376/emodin-a-compound-with-putative-antidiabetic-potential-deteriorates-glucose-tolerance-in-rodents
#17
Sameer Abu Eid, Michael Adams, Thomas Scherer, Héctor Torres-Gómez, Martina Theresa Hackl, Mairam Kaplanian, Rainer Riedl, Anton Luger, Clemens Fürnsinn
Emodin is found in remedies from Traditional Chinese Medicine. Since antihyperglycaemic action was observed in rodents, non-scientific sources advertise emodin intake as a natural cure for diabetes. Emodin was admixed to high fat-food of obese mice at two doses (2 and 5g/kg; daily emodin uptake 103 and 229mg/kg). Comparison was made to ad libitum fed and to food restricted control groups, the latter showing the same weight gain as the corresponding emodin-treated groups. Emodin blunted food intake by 6% and 20% for the low and high dose, which was accompanied by proportionate reductions in weight gain...
January 17, 2017: European Journal of Pharmacology
https://www.readbyqxmd.com/read/28108345/reinstatement-after-human-feature-positive-discrimination-learning
#18
REVIEW
Mathijs Franssen, Nathalie Claes, Bram Vervliet, Tom Beckers, Dirk Hermans, Frank Baeyens
In two experiments, using an online conditioned suppression task, we investigated the possibility of reinstatement of extinguished feature-target compound presentations after sequential feature-positive discrimination training in humans. Furthermore, given a hierarchical account of Pavlovian modulation (e.g., Bonardi, 1998; Bonardi and Jennings, 2009), we predicted A-US reinstatement to be stronger than US-only reinstatement. In Experiment 1, participants learned a sequential feature-positive discrimination (X→A(+)|A(-)), which was subsequently extinguished (X→A(-))...
January 17, 2017: Behavioural Processes
https://www.readbyqxmd.com/read/28108335/tryptase-catalyzed-core-histone-truncation-a-novel-epigenetic-regulatory-mechanism-in-mast-cells
#19
Fabio R Melo, Ola Wallerman, Aida Paivandy, Gabriela Calounova, Ann-Marie Gustafson, Benjamin R Sabari, Giuliano Zabucchi, C David Allis, Gunnar Pejler
BACKGROUND: Mast cells are key effector cells in allergic reactions. When activated to degranulate, they release a plethora of bioactive compounds from their secretory granules, including mast cell-restricted proteases such as tryptase. In a previous study we showed that tryptase, in addition to its intragranular location, can be found within the nuclei of mast cells where it truncates core histones at their N-terminal ends. OBJECTIVE: Considering that the N-terminal portions of the core histones constitute sites for posttranslational modifications of major epigenetic impact, we here evaluated whether histone truncation by tryptase could have an impact on epigenetic events in mast cells...
January 17, 2017: Journal of Allergy and Clinical Immunology
https://www.readbyqxmd.com/read/28108327/structurally-diverse-secondary-metabolites-from-a-deep-sea-derived-fungus-penicillium-chrysogenum-scsio-41001-and-their-biological-evaluation
#20
Shengtian Chen, Junfeng Wang, Zhen Wang, Xiuping Lin, Bingxin Zhao, Kumaravel Kaliaperumal, Xiaojian Liao, Zhengchao Tu, Jianlin Li, Shihai Xu, Yonghong Liu
Five new compounds, including a cytotoxic dimeric isocoumarin, bipenicilisorin (1), a merosesquiterpenoid, yaminterritrem C (2), a citrinin dimer, penicitrinone F (3), a alkaloid, terremide D (4), and a δ-valerolacton, (E)-4-(propen-1-yl)-5,6-dihydro-2H-pyran-2-one (5), along with ten known compounds (6-15) were isolated from a deep-sea-derived fungus Penicillium chrysogenum SCSIO 41001. Their structures and absolute configurations were elucidated by NMR spectra, MS, CD, optical rotation, X-ray crystallography, and compared with literature data...
January 17, 2017: Fitoterapia
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