keyword
https://read.qxmd.com/read/38697693/septic-acute-kidney-injury-and-gut-microbiome-should-we-change-our-approach
#21
REVIEW
Ioana Dicu-Andreescu, Mircea Niculae Penescu, Constantin Verzan
Incidence of acute kidney injury (AKI) remained relatively stable over the last decade and the adjusted risks for it and mortality are similar across different continents and regions. Also, the mortality of septic-AKI can reach 70% in critically-ill patients. These sole facts can give rise to a question: is there something we do not understand yet? Currently, there are no specific therapies for septic AKI and the treatment aims only to maintain the mean arterial pressure over 65mmHg by ensuring a good fluid resuscitation and by using vasopressors, along with antibiotics...
2024: Nefrología
https://read.qxmd.com/read/38695865/-microbacterium-salsuginis-sp-nov-a-halotolerant-actinobacterium-with-antimicrobial-activity
#22
JOURNAL ARTICLE
Qingyang Su, Yuwei Liu, Tingting Xia, Shuanglong Wei, Caixia Cui, Zhao Zhang, Xudong Liu, Guoxing Nie, Hong Ming
A novel Gram-staining-positive actinobacterium with antimicrobial activity, designated CFH 90308T , was isolated from the sediment of a salt lake in Yuncheng, Shanxi, south-western China. The isolate exhibited the highest 16S rRNA gene sequence similarities to Microbacterium yannicii G72T , Microbacterium hominis NBRC 15708T and Microbacterium xylanilyticum S3-ET (98.5, 98.4 and 98.2 %, respectively), and formed a separate clade with M. xylanilyticum S3-ET in phylogenetic trees. The strain grew at 15-40 ºC, pH 6...
May 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38695864/-streptomyces-albipurpureus-sp-nov-a-novel-actinobacterium-with-antimicrobial-activity-isolated-from-the-rhizospheric-soil-of-fritillaria-cirrhosa-d-don
#23
JOURNAL ARTICLE
Xiao Jiang, Yun Tang, You Yang, Jin Tang, Mingyan Hou, Ruiling Liu, Qian Dong, Zhaoxu Ma
A novel actinobacterium, designated strain CWNU-1T , was isolated from the rhizospheric soil of Fritillaria cirrhosa D. Don and examined using a polyphasic taxonomic approach. The organism developed pale blue aerial mycelia that was simply branched and terminated in open or closed coils of three or more volutions on International Streptomyces Project 3 agar. Spores were ellipsoidal to cylindrical with wrinkled surfaces. The strain showed high 16S rRNA gene sequence similarity to Streptomyces kurssanovii NBRC 13192T (98...
May 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38695863/-streptococcus-hohhotensis-sp-nov-isolated-from-the-breast-milk-of-a-healthy-woman
#24
JOURNAL ARTICLE
Yu Li, Fei Han, Yue Wu, Weicheng Li, Dongyan Ren, Xin Su, Lixia Zhao, Bilige Menghe, Wenjun Liu
Human breast milk contains lactic acid bacteria (LAB), which have an important influence on the composition of the intestinal microbia of infants. In this study, one strain of an α-hemolytic species of the genus Streptococcus , IMAU99199T , isolated from the breast milk of a healthy nursing mother in Hohhot city PR China, was studied to characterise its taxonomic status using phenotypic and molecular taxonomic methods. The results indicated that it represented a member of the mitis-suis clade, pneumoniae subclade of the genus Streptococcus ...
May 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38695302/human-gut-microbiota-and-their-production-of-endocannabinoid-like-mediators-are-directly-affected-by-a-dietary-oil
#25
JOURNAL ARTICLE
Charlène Roussel, Mathilde Sola, Jacob Lessard-Lord, Nayudu Nallabelli, Pamela Généreux, Camille Cavestri, Oumaima Azeggouar Wallen, Rosaria Villano, Frédéric Raymond, Nicolas Flamand, Cristoforo Silvestri, Vincenzo Di Marzo
Dietary omega-3 polyunsaturated fatty acids ( n -3 PUFAs) and the gut microbiome affect each other. We investigated the impact of supplementation with Buglossoides arvensis oil (BO), rich in stearidonic acid (SDA), on the human gut microbiome. Employing the Mucosal Simulator of the Human Intestinal Microbial Ecosystem (M-SHIME), we simulated the ileal and ascending colon microbiomes of four donors. Our results reveal two distinct microbiota clusters influenced by BO, exhibiting shared and contrasting shifts...
2024: Gut Microbes
https://read.qxmd.com/read/38695275/-luteibacter-mycovicinus-sp-nov-a-yellow-pigmented-gammaproteobacterium-found-as-an-endohyphal-symbiont-of-endophytic-ascomycota
#26
JOURNAL ARTICLE
David A Baltrus, Morgan Carter, Meara Clark, Caitlin Smith, Joseph Spraker, Patrik Inderbitzin, A Elizabeth Arnold
We isolated and described a yellow-pigmented strain of bacteria (strain 9143T ), originally characterized as an endohyphal inhabitant of an endophytic fungus in the Ascomycota. Although the full-length sequence of its 16S rRNA gene displays 99 % similarity to Luteibacter pinisoli , genomic hybridization demonstrated <30 % genomic similarity between 9143T and its closest named relatives, further supported by average nucleotide identity results. This and related endohyphal strains form a well-supported clade separate from L...
May 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38695096/multi-omics-reveal-the-gut-microbiota-mediated-severe-foraging-environment-adaption-of-small-wild-ruminants-in-the-three-river-source-national-park-china
#27
JOURNAL ARTICLE
Hongjin Liu, Xinquan Zhao, Shixiao Xu, Liang Zhao, Xueping Han, Xianli Xu, Na Zhao, Linyong Hu, Chongliang Luo, Xungang Wang, Qian Zhang, Tongqing Guo
The Tibetan antelope (Pantholops hodgsonii), blue sheep (Pseudois nayaur), and Tibetan sheep (Ovis aries) are the dominant small ruminants in the Three-River-Source National Park (TRSNP). However, knowledge about the association between gut microbiota and host adaptability remains poorly understood. Herein, multi-omics sequencing approaches were employed to investigate the gut microbiota-mediated forage adaption in these ruminants. The results revealed that although wild ruminants (WR) of P. hodgsoni and P...
May 2, 2024: Integrative Zoology
https://read.qxmd.com/read/38694915/research-on-the-metabolic-regulation-mechanism-of-yangyin-qingfei-decoction-plus-in-severe-pneumonia-caused-by-mycoplasma-pneumoniae-in-mice
#28
JOURNAL ARTICLE
Tianyu Zhang, Xiyu Zhao, Xining Zhang, Xiangyu Liang, Zhenglong Guan, Guanghan Wang, Guanghua Liu, Zhenqi Wu
Introduction: With amazing clinical efficacy, Yangyin Qingfei Decoction Plus (YQDP), a well-known and age-old Chinese compound made of ten Chinese botanical drugs, is utilized in clinical settings to treat a range of respiratory conditions. This study examines the impact of Yangyin Qingfei Decoction (YQDP) on lung tissue metabolic products in severe Mycoplasma pneumoniae pneumonia (SMPP) model mice and examines the mechanism of YQDP in treating MP infection using UPLC-MS/MS technology. Methods: YQDP's chemical composition was ascertained by the use of Agilent 1260 Ⅱ high-performance liquid chromatography...
2024: Frontiers in Pharmacology
https://read.qxmd.com/read/38691182/jeotgalibacillus-haloalkalitolerans-sp-nov-a-novel-alkalitolerant-and-halotolerant-bacterium-isolated-from-the-confluence-of-the-fenhe-river-and-the-yellow-river
#29
JOURNAL ARTICLE
Ya-Fei Zhang, Yun-Lin Peng, Yong-Hui Xiao, Bing Yu, Ming-Yue Cao, Zhi-Ling Zhang, Le-Qun Huang, Yi Li
A Gram-stain positive, aerobic, alkalitolerant and halotolerant bacterium, designated HH7-29 T , was isolated from the confluence of the Fenhe River and the Yellow River in Shanxi Province, PR China. Growth occurred at pH 6.0-12.0 (optimum, pH 8.0-8.5) and 15-40℃ (optimum, 32℃) with 0.5-24% NaCl (optimum, 2-9%). The predominant fatty acids (> 10.0%) were iso-C15:0 and anteiso-C15:0 . The major menaquinones were MK-7 and MK-8. The polar lipids were phosphatidylglycerol, diphosphatidylglycerol and two unidentified phospholipids...
May 1, 2024: Antonie Van Leeuwenhoek
https://read.qxmd.com/read/38688964/degradation-of-edible-mushroom-waste-by-hermetia-illucens-l-and-consequent-adaptation-of-its-gut-microbiota
#30
JOURNAL ARTICLE
Linhui Lai, Yaohang Long, Meng Luo, Bo Tu, Zailin Wu, Jinling Liu, Zhixian Wan, Guangyin Wang, Xianyi Wang, Hongmei Liu
The edible fungus industry is one of the pillar industries in the Yunnan-Guizhou Plateau, China. The expansion of the planting scale has led to the release of various mushroom residues, such as mushroom feet, and other wastes, which are not treated adequately, resulting in environmental pollution. This study investigated the ability of black soldier fly (Hermetia illucens L.) larvae (BSFL) to degrade mushroom waste. Moreover, this study analyzed changes in the intestinal bacterial community and gene expression of BSFL after feeding on mushroom waste...
April 30, 2024: Scientific Reports
https://read.qxmd.com/read/38687788/deficiency-of-il-22-binding-protein-enhances-the-ability-of-the-gut-microbiota-to-protect-against-enteric-pathogens
#31
JOURNAL ARTICLE
José L Fachi, Blanda Di Luccia, Susan Gilfillan, Hao-Wei Chang, Christina Song, Jiye Cheng, Marina Cella, Marco Aurelio Vinolo, Jeffrey I Gordon, Marco Colonna
Interleukin 22 (IL-22) promotes intestinal barrier integrity, stimulating epithelial cells to enact defense mechanisms against enteric infections, including the production of antimicrobial peptides. IL-22 binding protein (IL-22BP) is a soluble decoy encoded by the Il22ra2 gene that decreases IL-22 bioavailability, attenuating IL-22 signaling. The impact of IL-22BP on gut microbiota composition and functioning is poorly understood. We found that Il22ra2-/- mice are better protected against Clostridioides difficile and Citrobacter rodentium infections...
May 7, 2024: Proceedings of the National Academy of Sciences of the United States of America
https://read.qxmd.com/read/38687183/-anaerolentibacter-hominis-gen-nov-sp-nov-diplocloster-hominis-sp-nov-and-pilosibacter-fragilis-gen-nov-sp-nov-isolated-from-human-faeces
#32
JOURNAL ARTICLE
Yang Yan, Qing-Hua Zhao, Chang Xu, Rui-Qi Wei, He Jiang, Shuang-Jiang Liu
Three Gram-positive, obligately anaerobic bacterial strains, namely CSJ-1T , CSJ-3T , and CSJ-4T , were isolated from faeces of healthy persons. They were characterized through a combination of whole-genome sequencing, phenotypic traits, and metabolomic analysis. The genome sizes of CSJ-1T , CSJ-4T , and CSJ-3T were 3.3, 3.8, and 6.1 Mbp, with DNA G+C contents of 47.2, 48.3, and 48.8 mol%, respectively. Strain CSJ-3T was identified as representing a novel species, Diplocloster hominis (type strain CSJ-3T =CGMCC 1...
April 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38686914/biotic-and-abiotic-factors-acting-on-community-assembly-in-parallel-anaerobic-digestion-systems-from-a-brewery-wastewater-treatment-plant
#33
JOURNAL ARTICLE
Tatiana Spatola Rossi, Mateo Gallia, Leonardo Erijman, Eva Figuerola
Anaerobic digestion is a complex microbial process that mediates the transformation of organic waste into biogas. The performance and stability of anaerobic digesters relies on the structure and function of the microbial community. In this study, we asked whether the deterministic effect of wastewater composition outweighs the effect of reactor configuration on the structure and dynamics of anaerobic digester archaeal and bacterial communities. Biotic and abiotic factors acting on microbial community assembly in two parallel anaerobic digestion systems, an upflow anaerobic sludge blanket digestor (UASB) and a closed digester tank with a solid recycling system (CDSR), from a brewery WWTP were analysed utilizing 16S rDNA and mcrA amplicon sequencing and genome-centric metagenomics...
April 30, 2024: Environmental Technology
https://read.qxmd.com/read/38685283/sodium-propionate-oral-supplementation-ameliorates-depressive-like-behavior-through-gut-microbiome-and-histone-3-epigenetic-regulation
#34
JOURNAL ARTICLE
Luiza Marques Prates Behrens, Juciano Gasparotto, Pabulo Henrique Rampelotto, Manuel Adrian Riveros Escalona, Lucas Dos Santos da Silva, Flávio Gabriel Carazza-Kessler, Camila Pocharski Barbosa, Marlene Soares Campos, Márcio Dorn, Daniel Pens Gelain, José Cláudio Fonseca Moreira
Major Depressive Disorder (MDD) is a global health concern, affecting over 250 million individuals worldwide. In recent years, the gut-brain axis has emerged as a promising field for understanding the pathophysiology of MDD. Microbial metabolites, such as Short-Chain Fatty Acids (SCFAs) - acetate, butyrate, and propionate -, have gained attention for their potential to influence epigenetic modifications within the host brain. However, the precise mechanisms through which these metabolites participate in MDD pathophysiology remain elusive...
April 27, 2024: Journal of Nutritional Biochemistry
https://read.qxmd.com/read/38685037/membrane-lipid-remodeling-eradicates-helicobacter-pylori-by-manipulating-the-cholesteryl-6-acylglucoside-biosynthesis
#35
JOURNAL ARTICLE
Lih-Lih Ong, Hau-Ming Jan, Hong-Hanh Thi Le, Tsai-Chen Yang, Chou-Yu Kuo, Ai-Feng Feng, Kwok-Kong Tony Mong, Chun-Hung Lin
BACKGROUND: Helicobacter pylori, the main cause of various gastric diseases, infects approximately half of the human population. This pathogen is auxotrophic for cholesterol which it converts to various cholesteryl α-glucoside derivatives, including cholesteryl 6'-acyl α-glucoside (CAG). Since the related biosynthetic enzymes can be translocated to the host cells, the acyl chain of CAG likely comes from its precursor phosphatidylethanolamine (PE) in the host membranes. This work aims at examining how the acyl chain of CAG and PE inhibits the membrane functions, especially bacterial adhesion...
April 29, 2024: Journal of Biomedical Science
https://read.qxmd.com/read/38684634/influence-of-dietary-probiotic-and-alpha-monolaurin-on-performance-egg-quality-blood-constituents-and-egg-fatty-acids-profile-in-laying-hens
#36
JOURNAL ARTICLE
Ahmed A Saleh, Livio Galosi, Mahmoud Metwally, Mohammed Ragab, Mahmoud Hamza, Mostafa Shukry, Medhat Khairy, Mohammed H Alzawqari, Mahmoud M Azzam, Mahmoud Alagawany
This work was designed to evaluate the advantages of using multi-strain probiotics feed (Bacillus subtilis, Bacillus licheniformis and Clostridium butyricum) (PRO) and alpha-monolaurin (AML) on laying performance, criteria of egg quality, blood parameters, and yolk fatty acids' profile in laying hens. One hundred forty of Bovans brown laying hens at 45 weeks old (25th week of egg production) were randomly allocated into four groups, with seven replicates of five birds each in a complete randomized design. The first group was fed a basal diet without feed additives (0 g/kg diet), and the second, third, and fourth groups received diets containing 1 g PRO, 1 g AML, and 1 g PRO + 1 g AML/kg diet, respectively...
April 29, 2024: Probiotics and Antimicrobial Proteins
https://read.qxmd.com/read/38683675/enhancement-of-acyl-coa-precursor-supply-for-increased-avermectin-b1a-production-by-engineering-meilingmycin-polyketide-synthase-and-key-primary-metabolic-pathway-genes
#37
JOURNAL ARTICLE
Mengyao Yang, Yi Hao, Gang Liu, Ying Wen
Avermectins (AVEs), a family of macrocyclic polyketides produced by Streptomyces avermitilis, have eight components, among which B1a is noted for its strong insecticidal activity. Biosynthesis of AVE "a" components requires 2-methylbutyryl-CoA (MBCoA) as starter unit, and malonyl-CoA (MalCoA) and methylmalonyl-CoA (MMCoA) as extender units. We describe here a novel strategy for increasing B1a production by enhancing acyl-CoA precursor supply. First, we engineered meilingmycin (MEI) polyketide synthase (PKS) for increasing MBCoA precursor supply...
May 2024: Microbial Biotechnology
https://read.qxmd.com/read/38683662/-aquincola-agrisoli-sp-nov-isolated-from-rhizospheric-soil-of-eggplant-and-in-silico-genome-mining-for-the-prediction-of-biosynthetic-gene-clusters
#38
JOURNAL ARTICLE
Md Amdadul Huq, Md Shahedur Rahman, M Mizanur Rahman
A Gram-stain negative, aerobic, rod-shaped, motile and flagellated novel bacterial strain, designated MAHUQ-54T , was isolated from the rhizospheric soil of eggplant. The colonies were observed to be light pink coloured, smooth, spherical and 0.2-0.6 mm in diameter when grown on R2A agar medium for 2 days. MAHUQ-54T was able to grow at 15-40 °C, at pH 5.5-9.0 and in the presence of 0-0.5 % NaCl (w/v). The strain gave positive results for both catalase and oxidase tests...
April 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38683659/-psychrobacter-raelei-sp-nov-isolated-from-a-dog-with-peritonitis
#39
JOURNAL ARTICLE
Viviana Manzulli, Antonella Schiavone, Stefano Castellana, Marzia Albenzio, Maria Assunta Cafiero, Antonio Camarda, Loredana Capozzi, Francesca D'Angelo, Antonio Parisi, Ilaria Vasco, Dario Sciancalepore, Leonardo Marino, Luigina Serrecchia, Valeria Rondinone, Maria Campaniello, Giuseppe Crescenzo, Domenico Galante, Nicola Pugliese
A strain belonging to the genus Psychrobacter , named PraFG1T , was isolated from the peritoneal effusion of a stray dog during necropsy procedures. The strain was characterized by the phylogenetic analyses based on the nucleotide sequences of 16S and 23S rRNA genes and of gyrB , which placed the strain in the genus Psychrobacter . The nucleotide sequence of the chromosome confirmed the placement, showing an average nucleotide identity of 72.1, 77.7, and 77.5 % with the closest related species, namely Psychrobacter sanguinis , Psychrobacter piechaudii , and Psychrobacter phenylpyruvicus , respectively, thus indicating a novel species...
April 2024: International Journal of Systematic and Evolutionary Microbiology
https://read.qxmd.com/read/38682129/harnessing-black-soldier-fly-hermetia-illucens-prepupae-against-aeromonas-hydrophila-fermentation-based-fatty-acids-production-and-its-bioinformatic-assessment
#40
JOURNAL ARTICLE
Dahliatul Qosimah, Laminem Laminem, Dyah Setyawati, Candra Mandasari
BACKGROUND: Aeromonas hydrophila ( A. hydrophila ) is a bacterium with zoonotic potential and is multidrug-resistant. It utilizes hemolysin and aerolysin to spread infection. Black soldier flies (BSFs) can be antibacterial because of the fatty acids it contains. AIMS: This study aimed to investigate and compare the fatty acid profiles of BSF prepupae grown in fermented and nonfermented media using bioinformatics tools and assess their potential as antibacterial agents against A...
March 2024: Open Veterinary Journal
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