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Metal plant biotic stress

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https://www.readbyqxmd.com/read/29774043/integration-of-the-pokeweed-mirna-and-mrna-transcriptomes-reveals-targeting-of-jasmonic-acid-responsive-genes
#1
Kira C M Neller, Alexander Klenov, Juan C Guzman, Katalin A Hudak
The American pokeweed plant, Phytolacca americana , displays broad-spectrum resistance to plant viruses and is a heavy metal hyperaccumulator. However, little is known about the regulation of biotic and abiotic stress responses in this non-model plant. To investigate the control of miRNAs in gene expression, we sequenced the small RNA transcriptome of pokeweed treated with jasmonic acid (JA), a hormone that mediates pathogen defense and stress tolerance. We predicted 145 miRNAs responsive to JA, most of which were unique to pokeweed...
2018: Frontiers in Plant Science
https://www.readbyqxmd.com/read/29483898/competitive-traits-are-more-important-than-stress-tolerance-traits-in-a-cadmium-contaminated-rhizosphere-a-role-for-trait-theory-in-microbial-ecology
#2
Jennifer L Wood, Caixian Tang, Ashley E Franks
Understanding how biotic and abiotic factors govern the assembly of rhizosphere-microbial communities is a long-standing goal in microbial ecology. In phytoremediation research, where plants are used to remediate heavy metal-contaminated soils, a deeper understanding of rhizosphere-microbial ecology is needed to fully exploit the potential of microbial-assisted phytoremediation. This study investigated whether Grime's competitor/stress-tolerator/ruderal (CSR) theory could be used to describe the impact of cadmium (Cd) and the presence of a Cd-accumulating plant, Carpobrotus rossii (Haw...
2018: Frontiers in Microbiology
https://www.readbyqxmd.com/read/29459874/traversing-the-links-between-heavy-metal-stress-and-plant-signaling
#3
REVIEW
Siddhi K Jalmi, Prakash K Bhagat, Deepanjali Verma, Stanzin Noryang, Sumaira Tayyeba, Kirti Singh, Deepika Sharma, Alok K Sinha
Plants confront multifarious environmental stresses widely divided into abiotic and biotic stresses, of which heavy metal stress represents one of the most damaging abiotic stresses. Heavy metals cause toxicity by targeting crucial molecules and vital processes in the plant cell. One of the approaches by which heavy metals act in plants is by over production of reactive oxygen species (ROS) either directly or indirectly. Plants act against such overdose of metal in the environment by boosting the defense responses like metal chelation, sequestration into vacuole, regulation of metal intake by transporters, and intensification of antioxidative mechanisms...
2018: Frontiers in Plant Science
https://www.readbyqxmd.com/read/29324881/genome-wide-analysis-and-expression-profiles-of-glyoxalase-gene-families-in-chinese-cabbage-brassica-rapa-l
#4
Guixin Yan, Xin Xiao, Nian Wang, Fugui Zhang, Guizhen Gao, Kun Xu, Biyun Chen, Jiangwei Qiao, Xiaoming Wu
The glyoxalase pathway is composed of glyoxalase I (GLYI) and glyoxalase II (GLYII) and is responsible for the detoxification of a cytotoxic metabolite methylglyoxal (MG) into the nontoxic S-D-lactoylglutathione. The two glyoxalase enzymes play a crucial role in stress tolerance in various plant species. Recently, the GLY gene families have well been analyzed in Arabidopsis, rice and soybean, however, little is known about them in Chinese cabbage (Brassica rapa). Here, 16 BrGLYI and 15 BrGLYII genes were identified in the B...
2018: PloS One
https://www.readbyqxmd.com/read/29204080/genomics-of-metal-stress-mediated-signalling-and-plant-adaptive-responses-in-reference-to-phytohormones
#5
REVIEW
Anurakti Shukla, Sudhakar Srivastava, Penna Suprasanna
Introduction: As a consequence of a sessile lifestyle, plants often have to face a number of life threatening abiotic and biotic stresses. Plants counteract the stresses through morphological and physiological adaptations, which are imparted through flexible and well-coordinated network of signalling and effector molecules, where phytohormones play important role. Hormone synthesis, signal transduction, perception and cross-talks create a complex network. Omics approaches, which include transcriptomics, genomics, proteomics and metabolomics, have opened new paths to understand such complex networks...
December 2017: Current Genomics
https://www.readbyqxmd.com/read/29179082/effect-of-short-term-aluminum-stress-and-mycorrhizal-inoculation-on-nitric-oxide-metabolism-in-medicago-truncatula-roots
#6
Marzena Sujkowska-Rybkowska, Weronika Czarnocka, Izabela Sańko-Sawczenko, Damian Witoń
Aluminum (Al) toxicity can induce oxidative and nitrosative stress, which limits growth and yield of crop plants. Nevertheless, plant tolerance to stress may be improved by symbiotic associations including arbuscular mycorrhiza (AM). Nitric oxide (NO) is a signaling molecule involved in physiological processes and plant responses to abiotic and biotic stresses. However, almost no information about the NO metabolism has been gathered about AM. In the present work, Medicago truncatula seedlings were inoculated with Rhizophagus irregularis, and 7-week-old plants were treated with 50μM AlCl3 for 3h...
January 2018: Journal of Plant Physiology
https://www.readbyqxmd.com/read/28932199/bacillus-a-biological-tool-for-crop-improvement-through-bio-molecular-changes-in-adverse-environments
#7
REVIEW
Ramalingam Radhakrishnan, Abeer Hashem, Elsayed F Abd Allah
Crop productivity is affected by environmental and genetic factors. Microbes that are beneficial to plants are used to enhance the crop yield and are alternatives to chemical fertilizers and pesticides. Pseudomonas and Bacillus species are the predominant plant growth-promoting bacteria. The spore-forming ability of Bacillus is distinguished from that of Pseudomonas. Members of this genus also survive for a long time under unfavorable environmental conditions. Bacillus spp. secrete several metabolites that trigger plant growth and prevent pathogen infection...
2017: Frontiers in Physiology
https://www.readbyqxmd.com/read/28912786/co-infection-of-sweet-orange-with-severe-and-mild-strains-of-citrus-tristeza-virus-is-overwhelmingly-dominated-by-the-severe-strain-on-both-the-transcriptional-and-biological-levels
#8
Shimin Fu, Jonathan Shao, Changyong Zhou, John S Hartung
Citrus tristeza is one of the most destructive citrus diseases and is caused by the phloem-restricted Closterovirus, Citrus tristeza virus. Mild strain CTV-B2 does not cause obvious symptoms on indicators whereas severe strain CTV-B6 causes symptoms, including stem pitting, cupping, yellowing, and stiffening of leaves, and vein corking. Our laboratory has previously characterized changes in transcription in sweet orange separately infected with CTV-B2 and CTV-B6. In the present study, transcriptome analysis of Citrus sinensis in response to double infection by CTV-B2 and CTV-B6 was carried out...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28754626/in-sights-into-the-effect-of-heavy-metal-stress-on-the-endogenous-mustard-cystatin
#9
Shumaila Khan, Nafees A Khan, Bilqees Bano
Phytocystatins have been ascribed several protective roles against abiotic and biotic stress conditions. It was, therefore, thought worthwhile to document the effect of heavy metal stress on the endogenous plant cystatin. The mustard cystatin, purified from Brassica juncea (B. juncea) seeds retained its functional property of cysteine proteinase inhibition, despite exposure to high concentrations of metal ions, Cd(2+) and Ni(2+). An increase in inhibitory activity, ∼26% for Ni(2+) and ∼16% for Cd(2+) was observed, suggesting changes in protein conformation upon metal ion interaction...
December 2017: International Journal of Biological Macromolecules
https://www.readbyqxmd.com/read/28657742/microrna268-overexpression-affects-rice-seedling-growth-under-cadmium-stress
#10
Yanfei Ding, Yi Wang, Zhihua Jiang, Feijuan Wang, Qiong Jiang, Junwei Sun, Zhixiang Chen, Cheng Zhu
MicroRNAs (miRNAs) are 21-24-nucleotide-long RNAs that function as ubiquitous post-transcriptional regulators of gene expression in plants and animals. Increasing evidence points to the important role of miRNAs in plant responses to abiotic and biotic stresses. Cadmium (Cd) is a nonessential heavy metal highly toxic to plants. Although many genes encoding metal transporters have been characterized, the mechanisms for the regulation of the expression of the heavy-metal transporter genes are largely unknown. In this study, we found that the expression of miR268 in rice was significantly induced under Cd stress...
July 26, 2017: Journal of Agricultural and Food Chemistry
https://www.readbyqxmd.com/read/28643161/nonlinear-biotic-ligand-model-for-assessing-alleviation-effects-of-ca-mg-and-k-on-cd-toxicity-to-soybean-roots
#11
Bo-Ching Chen, Pin-Jie Wang, Pei-Chi Ho, Kai-Wei Juang
Developing a nonlinear biotic ligand model (BLM) that considers the geometrical constraints for binding of different cations on biotic ligands will provide more reliable details about the hypothetical mechanism governing the alleviation of cadmium (Cd) toxicity by coexistent cations. Soybean seedlings under Cd stress produced by various activities of coexistent cations such as calcium (Ca2+ ), magnesium (Mg2+ ), and potassium (K+ ) were hydroponically assayed for Cd toxicity to soybean roots. The Cd2+ activity resulting in 50% reduction of root elongation (RE), EA50 , was used for assessing the Cd toxicity to the soybean seedling...
September 2017: Ecotoxicology
https://www.readbyqxmd.com/read/28555143/global-transcriptome-analysis-of-combined-abiotic-stress-signaling-genes-unravels-key-players-in-oryza-sativa-l-an-in-silico-approach
#12
Pandiyan Muthuramalingam, Subramanian R Krishnan, Ramanujam Pothiraj, Manikandan Ramesh
Combined abiotic stress (CAbS) affects the field grown plants simultaneously. The multigenic and quantitative nature of uncontrollable abiotic stresses complicates the process of understanding the stress response by plants. Considering this, we analyzed the CAbS response of C3 model plant, Oryza sativa by meta-analysis. The datasets of commonly expressed genes by drought, salinity, submergence, metal, natural expression, biotic, and abiotic stresses were data mined through publically accessible transcriptomic abiotic stress (AbS) responsive datasets...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28540554/understanding-brassinosteroid-regulated-mechanisms-to-improve-stress-tolerance-in-plants-a-critical-review
#13
REVIEW
Fahim Nawaz, Muhammad Naeem, Bilal Zulfiqar, Asim Akram, Muhammad Yasin Ashraf, Muhammad Raheel, Rana Nauman Shabbir, Rai Altaf Hussain, Irfan Anwar, Muhammad Aurangzaib
Brassinosteroids (BRs) are steroidal plant hormones involved in regulation of physiological and molecular processes to ameliorate various biotic and abiotic stresses. Exogenous application of BRs to improve stress tolerance in plants has recently become a high research priority. Several studies have revealed the involvement of these steroidal hormones in upregulation of stress-related defense genes and their cross talk with other metabolic pathways. This is likely to stimulate research on many unanswered questions regarding their role in enhancing the ability of plants to tolerate adverse environmental conditions...
July 2017: Environmental Science and Pollution Research International
https://www.readbyqxmd.com/read/28504920/silicon-s-role-in-abiotic-and-biotic-plant-stresses
#14
REVIEW
Daniel Debona, Fabrício A Rodrigues, Lawrence E Datnoff
Silicon (Si) plays a pivotal role in the nutritional status of a wide variety of monocot and dicot plant species and helps them, whether directly or indirectly, counteract abiotic and/or biotic stresses. In general, plants with a high root or shoot Si concentration are less prone to pest attack and exhibit enhanced tolerance to abiotic stresses such as drought, low temperature, or metal toxicity. However, the most remarkable effect of Si is the reduction in the intensities of a number of seedborne, soilborne, and foliar diseases in many economically important crops that are caused by biotrophic, hemibiotrophic, and necrotrophic plant pathogens...
August 4, 2017: Annual Review of Phytopathology
https://www.readbyqxmd.com/read/28386269/silicon-and-plants-current-knowledge-and-technological-perspectives
#15
Marie Luyckx, Jean-Francois Hausman, Stanley Lutts, Gea Guerriero
Elemental silicon (Si), after oxygen, is the second most abundant element in the earth's crust, which is mainly composed of silicates. Si is not considered essential for plant growth and development, however, increasing evidence in the literature shows that this metalloid is beneficial to plants, especially under stress conditions. Indeed Si alleviates the toxic effects caused by abiotic stresses, e.g., salt stress, drought, heavy metals, to name a few. Biogenic silica is also a deterrent against herbivores...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28377746/genome-guided-insights-into-the-plant-growth-promotion-capabilities-of-the-physiologically-versatile-bacillus-aryabhattai-strain-ab211
#16
Chandrima Bhattacharyya, Utpal Bakshi, Ivy Mallick, Shayantan Mukherji, Biswajit Bera, Abhrajyoti Ghosh
Bacillus aryabhattai AB211 is a plant growth promoting, Gram-positive firmicute, isolated from the rhizosphere of tea (Camellia sinensis), one of the oldest perennial crops and a major non-alcoholic beverage widely consumed all over the world. The whole genome of B. aryabhattai AB211 was sequenced, annotated and evaluated with special focus on genomic elements related to plant microbe interaction. It's genome sequence reveals the presence of a 5,403,026 bp chromosome. A total of 5226 putative protein-coding sequences, 16 rRNA, 120 tRNA, 8 ncRNAs, 58 non-protein coding genes, and 11 prophage regions were identified...
2017: Frontiers in Microbiology
https://www.readbyqxmd.com/read/28223993/diacylglycerol-kinases-are-widespread-in-higher-plants-and-display-inducible-gene-expression-in-response-to-beneficial-elements-metal-and-metalloid-ions
#17
Hugo F Escobar-Sepúlveda, Libia I Trejo-Téllez, Paulino Pérez-Rodríguez, Juan V Hidalgo-Contreras, Fernando C Gómez-Merino
Diacylglycerol kinases (DGKs) are pivotal signaling enzymes that phosphorylate diacylglycerol (DAG) to yield phosphatidic acid (PA). The biosynthesis of PA from phospholipase D (PLD) and the coupled phospholipase C (PLC)/DGK route is a crucial signaling process in eukaryotic cells. Next to PLD, the PLC/DGK pathway is the second most important generator of PA in response to biotic and abiotic stresses. In eukaryotic cells, DGK, DAG, and PA are implicated in vital processes such as growth, development, and responses to environmental cues...
2017: Frontiers in Plant Science
https://www.readbyqxmd.com/read/28155655/between-species-differences-in-gene-copy-number-are-enriched-among-functions-critical-for-adaptive-evolution-in-arabidopsis-halleri
#18
Vasantika Suryawanshi, Ina N Talke, Michael Weber, Roland Eils, Benedikt Brors, Stephan Clemens, Ute Krämer
BACKGROUND: Gene copy number divergence between species is a form of genetic polymorphism that contributes significantly to both genome size and phenotypic variation. In plants, copy number expansions of single genes were implicated in cultivar- or species-specific tolerance of high levels of soil boron, aluminium or calamine-type heavy metals, respectively. Arabidopsis halleri is a zinc- and cadmium-hyperaccumulating extremophile species capable of growing on heavy-metal contaminated, toxic soils...
December 22, 2016: BMC Genomics
https://www.readbyqxmd.com/read/28103776/small-and-hungry-micrornas-in-micronutrient-homeostasis-of-plants
#19
Prashanti Patel, Karuna Yadav, Thumballi R Ganapathi
MicroRNAs are emerging players in plant development and response to stresses, both biotic and abiotic such as micronutrient deficiency. These small RNAs regulate cognate downstream targets either by transcript cleavage or translational inhibition. Micronutrient deficiencies lead to poor quality and yield of crops and impaired human health. Over the years several microRNAs have been identified which regulate expression of genes controlling uptake, mobilization and homeostasis of macronutrients such as nitrogen, phosphorus and sulfur to ensure sufficiency without toxicity...
2017: MicroRNA
https://www.readbyqxmd.com/read/28052509/spatially-dependent-biotic-and-abiotic-factors-drive-survivorship-and-physical-structure-of-green-roof-vegetation
#20
Jason M Aloisio, Matthew I Palmer, Mario A Giampieri, Amy R Tuininga, James D Lewis
Plant survivorship depends on biotic and abiotic factors that vary at local and regional scales. This survivorship, in turn, has cascading effects on community composition and the physical structure of vegetation. Survivorship of native plant species is variable among populations planted in environmentally stressful habitats like urban roofs, but the degree to which factors at different spatial scales affect survivorship in urban systems is not well understood. We evaluated the effects of biotic and abiotic factors on survivorship, composition, and physical structure of two native perennial species assemblages, one characterized by a mixture of C4 grasses and forbs (Hempstead Plains, HP) and one characterized by a mixture of C3 grasses and forbs (Rocky Summit, RS), that were initially sown at equal ratios of growth forms (5:1:4; grass, N-fixing forb and non-N-fixing forb) in replicate 2-m(2) plots planted on 10 roofs in New York City (New York, USA)...
January 2017: Ecological Applications: a Publication of the Ecological Society of America
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