keyword
https://read.qxmd.com/read/38563070/assessment-of-cyp-mediated-drug-interactions-for-enasidenib-based-on-a-cocktail-study-in-patients-with-relapse-or-refractory-acute-myeloid-leukemia-or-myelodysplastic-syndrome
#21
JOURNAL ARTICLE
Yiming Cheng, Xiaomin Wang, Atalanta Ghosh, Jie Pu, Leonidas N Carayannopoulos, Yan Li
As a selective and potent inhibitor targeting the isocitrate dehydrogenase-2 (IDH2) mutant protein, enasidenib obtained approval from the US Food and Drug Administration (FDA) in 2017 for adult patients with acute myeloid leukemia (AML) with an IDH2 mutation. In vitro investigations demonstrated that enasidenib affects various drug metabolic enzymes and transporters. This current investigation aimed to assess enasidenib on the pharmacokinetics (PKs) of CYP substrates, including dextromethorphan (CYP2D6 probe drug), flurbiprofen (CYP2C9 probe drug), midazolam (CYP3A4 probe drug), omeprazole (CYP2C19 probe drug), and pioglitazone (CYP2C8 probe drug), in patients with AML or myelodysplastic syndrome...
April 2, 2024: Journal of Clinical Pharmacology
https://read.qxmd.com/read/38559311/deciphering-the-biosynthesis-and-physiological-function-of-5-methylated-pyrazinones-produced-by-myxobacteria
#22
JOURNAL ARTICLE
Le-Le Zhu, Qingyu Yang, De-Gao Wang, Luo Niu, Zhuo Pan, Shengying Li, Yue-Zhong Li, Wei Zhang, Changsheng Wu
Myxobacteria are a prolific source of secondary metabolites with sheer chemical complexity, intriguing biosynthetic enzymology, and diverse biological activities. In this study, we report the discovery, biosynthesis, biomimetic total synthesis, physiological function, structure-activity relationship, and self-resistance mechanism of the 5-methylated pyrazinone coralinone from a myxobacterium Corallococcus exiguus SDU70. A single NRPS/PKS gene corA was genetically and biochemically demonstrated to orchestrate coralinone, wherein the integral PKS part is responsible for installing the 5-methyl group...
March 27, 2024: ACS Central Science
https://read.qxmd.com/read/38556104/distribution-and-virulence-of-escherichia-coli-harboring-cyclomodulins-and-supplementary-virulence-genes-isolates-from-clinical-and-environmental-samples
#23
JOURNAL ARTICLE
Nora DeLira-Bustillos, Uriel A Angulo-Zamudio, Nidia Leon-Sicairos, Hector Flores-Villaseñor, Jorge Velazquez-Roman, Gabriela Tapia-Pastrana, Francisco A Martínez-Villa, Rafael Velázquez-Cruz, Jorge Salmerón, Samuel Canizales-Quinteros, Adrian Canizalez-Roman
This study aimed to determine the prevalence of cyclomodulins (cdt, cnf, pks and cif) in Escherichia coli (E. coli) isolated from clinical and environmental samples, the presence of supplementary virulence genes (SVG), antibiotic resistance, and in vitro cytotoxicity. 413 E. coli were isolated from clinical (stool from obese subjects, normal weight subjects, children with diarrhea, and children without diarrhea; and urine from pregnant and non-pregnant women with urinary tract infections) and environmental (water and different foods) samples...
March 29, 2024: Microbial Pathogenesis
https://read.qxmd.com/read/38554227/docetaxel-cyclophosphamide-and-epirubicin-application-of-pbpk-modeling-to-gain-new-insights-for-drug-drug-interactions
#24
JOURNAL ARTICLE
Tongtong Li, Sufeng Zhou, Lu Wang, Tangping Zhao, Jue Wang, Feng Shao
The new adjuvant chemotherapy of docetaxel, epirubicin, and cyclophosphamide has been recommended for treating breast cancer. It is necessary to investigate the potential drug-drug Interactions (DDIs) since they have a narrow therapeutic window in which slight differences in exposure might result in significant differences in treatment efficacy and tolerability. To guide clinical rational drug use, this study aimed to evaluate the DDI potentials of docetaxel, cyclophosphamide, and epirubicin in cancer patients using physiologically based pharmacokinetic (PBPK) models...
March 30, 2024: Journal of Pharmacokinetics and Pharmacodynamics
https://read.qxmd.com/read/38551073/polyketide-synthase-positive-escherichia-coli-one-time-measurement-in-stool-is-not-informative-of-colorectal-cancer-risk-in-a-screening-setting
#25
JOURNAL ARTICLE
Willemijn de Klaver, Meike de Wit, Anne Bolijn, Marianne Tijssen, Pien Delis-van Diemen, Margriet Lemmens, Manon Cw Spaander, Evelien Dekker, Monique E van Leerdam, Veerle Mh Coupé, Ruben van Boxtel, Hans Clevers, Beatriz Carvalho, Gerrit A Meijer
Environmental factors like the pathogenicity island polyketide synthase positive (pks+) Escherichia coli (E. coli) could have potential for risk stratification in colorectal cancer (CRC) screening. The association between pks+ E. coli measured in fecal immunochemical test (FIT) samples and the detection of advanced neoplasia (AN) at colonoscopy was investigated. Biobanked FIT samples were analyzed for both presence of E. coli and pks+ E. coli and correlated with colonoscopy findings; 5020 CRC screening participants were included...
March 29, 2024: Journal of Pathology
https://read.qxmd.com/read/38549719/multilevel-posterior-spinal-fusion-following-percutaneous-third-generation-kyphoplasty-complicated-by-vertebral-compression-fracture-progression
#26
Bongseok Jung, Anas Abbas, Justin Han, Alex Ngan, Austen Katz, David Essig
Newer third generation percutaneous kyphoplasty (PKs) may minimize risks associated with older generation kyphoplasties such as new adjacent fractures, fracture progression, cement leakage, neurologic sequelae, and kyphosis. Additionally, posterior pedicle spinal fusion (PPSF) may minimize risk of long-term complications following PKs while maximizing the benefits of stable spinal alignment. The patient developed adjacent fracture progression, posterior retropulsion, and kyphosis following third generation kyphoplasty...
March 2024: Journal of Surgical Case Reports
https://read.qxmd.com/read/38545761/using-real-world-data-to-externally-evaluate-population-pharmacokinetic-models-of-dexmedetomidine-in-children-and-infants
#27
JOURNAL ARTICLE
Sean McCann, Victória E Helfer, Stephen J Balevic, Chi D Hornik, Stuart L Goldstein, Julie Autmizguine, Marisa Meyer, Amira Al-Uzri, Sarah G Anderson, Elizabeth H Payne, Sitora Turdalieva, Daniel Gonzalez
Dexmedetomidine is a sedative used in both adults and off-label in children with considerable reported pharmacokinetic (PK) interindividual variability affecting drug exposure across populations. Several published models describe the population PKs of dexmedetomidine in neonates, infants, children, and adolescents, though very few have been externally evaluated. A prospective PK dataset of dexmedetomidine plasma concentrations in children and young adults aged 0.01-19.9 years was collected as part of a multicenter opportunistic PK study...
March 28, 2024: Journal of Clinical Pharmacology
https://read.qxmd.com/read/38545261/collagen-type-i-mimicking-peptide-additives-to-functionalize-synthetic-supramolecular-hydrogels
#28
JOURNAL ARTICLE
Annika F Vrehen, Johnick F van Sprang, Maaike J G Schotman, Patricia Y W Dankers
Small bioactive peptide sequences derived from extracellular matrix proteins possess the ability to interact with cell receptors. As such, these peptide additives are excellent mimics to develop materials for 3D cell culture. Two types of supramolecular modified collagen type I mimicking peptide additives are presented; UPy-GFOGER (39 amino acids), with a novel superstructure, and the more simplistic UPy-DGEA (7 amino acids). Here, we studied the impact of the conformational differences between both peptide additives, on their biological performance...
June 2024: Materials today. Bio
https://read.qxmd.com/read/38543599/mining-biosynthetic-gene-clusters-of-pseudomonas-vancouverensis-utilizing-whole-genome-sequencing
#29
JOURNAL ARTICLE
Prabin Tamang, Arjun Upadhaya, Pradeep Paudel, Kumudini Meepagala, Charles L Cantrell
Natural product (NP)-based pesticides have emerged as a compelling alternative to traditional chemical fungicides, attracting substantial attention within the agrochemical industry as the world is pushing toward sustainable and environmentally friendly approaches to safeguard crops. Microbes, both bacteria and fungi, are a huge source of diverse secondary metabolites with versatile applications across pharmaceuticals, agriculture, and the food industry. Microbial genome mining has been accelerated for pesticide/drug discovery and development in recent years, driven by advancements in genome sequencing, bioinformatics, metabolomics/metabologenomics, and synthetic biology...
March 9, 2024: Microorganisms
https://read.qxmd.com/read/38543087/pk-modeling-of-l-4-boronophenylalanine-and-development-of-bayesian-predictive-platform-for-l-4-boronophenylalanine-pks-for-boron-neutron-capture-therapy
#30
JOURNAL ARTICLE
Woohyoung Kim, Ji Yeong Won, Jungyu Yi, Seung Chan Choi, Sang Min Lee, Kyungran Mun, Hyeong-Seok Lim
L-4-[(10 B)]Boronophenylalanine (BPA) is an amino acid analogue with a boron-10 moiety. It is most widely used as a boron carrier in boron neutron capture therapy. In this study, a Bayesian predictive platform of blood boron concentration based on a BPA pharmacokinetic (PK) model was developed. This platform is user-friendly and can predict the individual boron PK and optimal time window for boron neutron capture therapy in a simple way. The present study aimed to establish a PK model of L-4-boronophenylalanine and develop a Bayesian predictive platform for blood boron PKs for user-friendly estimation of boron concentration during neutron irradiation of neutron capture therapy...
February 26, 2024: Pharmaceuticals
https://read.qxmd.com/read/38540679/comprehensive-data-driven-assessment-of-non-kinase-targets-of-inhibitors-of-the-human-kinome
#31
JOURNAL ARTICLE
Mona Mobasher, Martin Vogt, Elena Xerxa, Jürgen Bajorath
Protein kinases (PKs) are involved in many intracellular signal transduction pathways through phosphorylation cascades and have become intensely investigated pharmaceutical targets over the past two decades. Inhibition of PKs using small-molecular inhibitors is a premier strategy for the treatment of diseases in different therapeutic areas that are caused by uncontrolled PK-mediated phosphorylation and aberrant signaling. Most PK inhibitors (PKIs) are directed against the ATP cofactor binding site that is largely conserved across the human kinome comprising 518 wild-type PKs (and many mutant forms)...
February 21, 2024: Biomolecules
https://read.qxmd.com/read/38528911/a-case-report-of-pallister-killian-syndrome-with-an-unusual-mosaic-supernumerary-marker-chromosome-12-with-interstitial-12p13-1-p12-1-duplication
#32
JOURNAL ARTICLE
T V Karamysheva, I N Lebedev, L I Minaycheva, L P Nazarenko, A A Kashevarova, D A Fedotov, N A Skryabin, M E Lopatkina, A D Cheremnykh, E A Fonova, T V Nikitina, E A Sazhenova, M M Skleimova, N A Kolesnikov, G V Drozdov, Y S Yakovleva, G N Seitova, K E Orishchenko, N B Rubtsov
Pallister-Killian syndrome (PKS) is a rare inherited disease with multiple congenital anomalies, profound intellectual disability, and the presence in the karyotype of sSMC - i(12)(p10). The frequency of PKS may be underestimated due to problems with cytogenetic diagnosis caused by tissue-specific mosaicism and usually a low percentage of peripheral blood cells containing sSMC. Such tissue-specific mosaicism also complicates a detailed analysis of the sSMC, which, along with the assessment of mosaicism in different tissues, is an important part of cytogenetic diagnosis in PKS...
2024: Frontiers in Genetics
https://read.qxmd.com/read/38524879/optimal-once-daily-busulfan-administration-in-pediatric-patients-a-simulation-based-investigation-of-intravenous-infusion-times
#33
JOURNAL ARTICLE
Yun Kim, Sungha Moon, Su-Jin Rhee
PURPOSE: Pediatric patients receiving hematopoietic stem cell transplantation undergo regular administration of intravenous busulfan as a conditioning regimen. Once-daily regimen of busulfan has been proposed as a more convenient alternative to the traditional regimen, but it may increase the risk of toxicity such as veno-occlusive disease (VOD). The study aims to evaluate the pharmacokinetics (PKs) of once-daily regimens and investigate appropriate intravenous infusion times to reduce the risk of toxicity...
2024: Drug Design, Development and Therapy
https://read.qxmd.com/read/38524546/therapeutic-potential-of-orally-applied-kb-r7943-in-streptozotocin-induced-neuropathy-in-rats
#34
JOURNAL ARTICLE
Pavlina Andreeva-Gateva, Milen Hristov, Margarita Strokova-Stoilova, Natasha Ivanova, Zafer Sabit, Slavina Surcheva, Mihail Beliakov, Georgi Karakashev, Ivan Sukhov, Daria Belinskaya, Natalia Shestakova
Both peripheral neuropathy and depression can be viewed as neurodegeneration's consequences of diabetes, at least in part coexisting with or resulting from sodium-calcium dysbalance. This study aims to assess the therapeutic potential of the orally applied reverse-mode inhibitor of the sodium-calcium exchanger (NCX) KB-R7943 in the streptozotocin (STZ) diabetes model in rats. A pilot pharmacokinetic (PK) study with high-performance liquid chromatography with high-resolution tandem mass spectrometric detection revealed higher drug exposure (AUC), lower volume of distribution (Vd) and clearance (Cl), and faster decline of the plasma concentration (ƛ) in rats with diabetes vs...
March 30, 2024: Heliyon
https://read.qxmd.com/read/38519421/the-pharmacokinetics-and-pharmacodynamics-of-ibogaine-in-opioid-use-disorder-patients
#35
JOURNAL ARTICLE
Thomas Knuijver, Rob Ter Heine, Arnt F A Schellekens, Paniz Heydari, Luc Lucas, Sjoerd Westra, Maarten Belgers, Toon van Oosteren, Robbert Jan Verkes, Cornelis Kramers
OBJECTIVE: Ibogaine is a hallucinogenic drug that may be used to treat opioid use disorder (OUD). The relationships between pharmacokinetics (PKs) of ibogaine and its metabolites and their clinical effects on side effects and opioid withdrawal severity are unknown. We aimed to study these relationships in patients with OUD undergoing detoxification supported by ibogaine. METHODS: The study was performed in 14 subjects with OUD. They received a single dose of 10mg/kg ibogaine hydrochloride...
March 22, 2024: Journal of Psychopharmacology
https://read.qxmd.com/read/38515435/structure-and-function-of-the-%C3%AE-hydroxylation-bimodule-of-the-mupirocin-polyketide-synthase
#36
JOURNAL ARTICLE
Ashley J Winter, R Nisha Khanizeman, Abigail M C Barker-Mountford, Andrew J Devine, Luoyi Wang, Zhongshu Song, Jonathan A Davies, Paul R Race, Christopher Williams, Thomas J Simpson, Christine L Willis, Matthew P Crump
Mupirocin is a clinically important antibiotic produced by a trans -AT Type I polyketide synthase (PKS) in Pseudomonas fluorescens . The major bioactive metabolite, pseudomonic acid A (PA-A), is assembled on a tetrasubstituted tetrahydropyran (THP) core incorporating a 6-hydroxy group proposed to be introduced by α-hydroxylation of the thioester of the acyl carrier protein (ACP) bound polyketide chain. Herein, we describe an in vitro approach combining purified enzyme components, chemical synthesis, isotopic labelling, mass spectrometry and NMR in conjunction with in vivo studies leading to the first characterisation of the α-hydroxylation bimodule of the mupirocin biosynthetic pathway...
November 20, 2023: Angewandte Chemie
https://read.qxmd.com/read/38515152/mutagenetic-analysis-of-the-biosynthetic-pathway-of-tetramate-bripiodionen-bearing-3-2h-pyran-2-ylidene-pyrrolidine-2-4-dione-skeleton
#37
JOURNAL ARTICLE
Haixia Zang, Yijia Cheng, Mengjia Li, Lin Zhou, Li-Li Hong, Hai Deng, Hou-Wen Lin, Yongjun Zhou
BACKGROUND: Natural tetramates are a family of hybrid polyketides bearing tetramic acid (pyrrolidine-2,4-dione) moiety exhibiting a broad range of bioactivities. Biosynthesis of tetramates in microorganisms is normally directed by hybrid polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) machineries, which form the tetramic acid ring by recruiting trans- or cis-acting thioesterase-like Dieckmann cyclase in bacteria. There are a group of tetramates with unique skeleton of 3-(2H-pyran-2-ylidene)pyrrolidine-2,4-dione, which remain to be investigated for their biosynthetic logics...
March 21, 2024: Microbial Cell Factories
https://read.qxmd.com/read/38513027/evolution-guided-engineering-of-trans-acyltransferase-polyketide-synthases
#38
JOURNAL ARTICLE
Mathijs F J Mabesoone, Stefan Leopold-Messer, Hannah A Minas, Clara Chepkirui, Pornsuda Chawengrum, Silke Reiter, Roy A Meoded, Sarah Wolf, Ferdinand Genz, Nancy Magnus, Birgit Piechulla, Allison S Walker, Jörn Piel
Bacterial multimodular polyketide synthases (PKSs) are giant enzymes that generate a wide range of therapeutically important but synthetically challenging natural products. Diversification of polyketide structures can be achieved by engineering these enzymes. However, notwithstanding successes made with textbook cis -acyltransferase ( cis -AT) PKSs, tailoring such large assembly lines remains challenging. Unlike textbook PKSs, trans -AT PKSs feature an extraordinary diversity of PKS modules and commonly evolve to form hybrid PKSs...
March 22, 2024: Science
https://read.qxmd.com/read/38511523/clinical-evaluation-of-pf614-a-novel-taap-prodrug-of-oxycodone-versus-oxycontin-in-a-multi-ascending-dose-study-with-a-bioequivalence-arm-in-healthy-volunteers
#39
JOURNAL ARTICLE
D Lynn Kirkpatrick, Cari Evans, Linda A Pestano, Jeffrey Millard, Matthew Johnston, Emily Mick, William K Schmidt
PF614, a trypsin-activated abuse protection oxycodone prodrug designed to reduce recreational drug abuse, was compared to OxyContin for safety and pharmacokinetics (PKs) of plasma oxycodone following oral administration. This study was a two-part design including a multi-ascending dose (part A) and a bioequivalence (BE) study (part B) in healthy volunteers. In part A, 24 subjects were randomized 3:1 to receive PF614 (50, 100, or 200 mg, n = 6/cohort) or OxyContin (20, 40, or 80 mg; n = 2/cohort) in ascending cohorts, delivered every 12 h for a total of nine doses...
March 2024: Clinical and Translational Science
https://read.qxmd.com/read/38497266/more-than-a-colour-how-pigment-influences-colourblind-microbes
#40
REVIEW
Gary M Wessel, Lili Xing, Nathalie Oulhen
Many animals have pigments when they themselves cannot see colour. Perhaps those pigments enable the animal to avoid predators, or to attract mates. Maybe even those pigmented surfaces are hosts for microbes, even when the microbes do not see colour. Do some pigments then serve as a chemical signal for a good or bad microbial substrate? Maybe pigments attract or repel various microbe types? Echinoderms serve as an important model to test the mechanisms of pigment-based microbial interactions. Echinoderms are marine benthic organisms, ranging from intertidal habitats to depths of thousands of metres and are exposed to large varieties of microbes...
May 6, 2024: Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences
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