keyword
https://read.qxmd.com/read/38652635/exploring-video-denoising-in-thermal-infrared-imaging-physics-inspired-noise-generator-dataset-and-model
#1
JOURNAL ARTICLE
Lijing Cai, Xiangyu Dong, Kailai Zhou, Xun Cao
We endeavor on a rarely explored task named thermal infrared video denoising. Perception in the thermal infrared significantly enhances the capabilities of machine vision. Nonetheless, noise in imaging systems is one of the factors that hampers the large-scale application of equipment. Existing thermal infrared denoising methods, primarily focusing on the image level, inadequately utilize time-domain information and insufficiently conduct investigation of system-level mixed noise, presenting the inferior ability in the video-recorded era; while video denoising methods, commonly applied to RGB cameras, exhibit uncertain effectiveness owing to substantial dissimilarities in the noise models and modalities between RGB and thermal infrared images...
April 23, 2024: IEEE Transactions on Image Processing: a Publication of the IEEE Signal Processing Society
https://read.qxmd.com/read/38650964/striped-expression-of-leucine-rich-repeat-proteins-coordinates-cell-intercalation-and-compartment-boundary-formation-in-the-early-drosophila-embryo
#2
JOURNAL ARTICLE
Chloe A Kuebler, Adam C Paré
Planar polarity is a commonly observed phenomenon in which proteins display a consistent asymmetry in their subcellular localization or activity across the plane of a tissue. During animal development, planar polarity is a fundamental mechanism for coordinating the behaviors of groups of cells to achieve anisotropic tissue remodeling, growth, and organization. Therefore, a primary focus of developmental biology research has been to understand the molecular mechanisms underlying planar polarity in a variety of systems to identify conserved principles of tissue organization...
August 2023: Symmetry
https://read.qxmd.com/read/38650596/identification-of-mulberry-leaf-flavonoids-and-evaluating-their-protective-effects-on-h-2-o-2-induced-oxidative-damage-in-equine-skeletal-muscle-satellite-cells
#3
JOURNAL ARTICLE
Xinzhuang Zhang, Aopan Geng, Di Cao, Manglai Dugarjaviin
Introduction: Horses are susceptible to oxidative stress during strenuous endurance exercise, leading to muscle fatigue and damage. Mulberry leaf flavonoids (MLFs) possess significant antioxidant properties. However, the antioxidant efficacy of MLFs can be influenced by the extraction process, and their impact on H2 O2 -induced oxidative stress in equine skeletal muscle satellite cells (ESMCs) remains unexplored. Methods: Our study employed three extraction methods to obtain MLFs: ultrasound-assisted extraction (CEP), purification with AB-8 macroporous resin (RP), and n-butanol extraction (NB-EP)...
2024: Frontiers in Molecular Biosciences
https://read.qxmd.com/read/38650576/heavy-metal-stress-and-mitogen-activated-kinase-transcription-factors-in-plants-exploring-heavy-metal-ros-influences-on-plant-signalling-pathways
#4
JOURNAL ARTICLE
Lee-Ann Niekerk, Arun Gokul, Gerhard Basson, Mihlali Badiwe, Mbukeni Nkomo, Ashwil Klein, Marshall Keyster
Due to their stationary nature, plants are exposed to a diverse range of biotic and abiotic stresses, of which heavy metal (HM) stress poses one of the most detrimental abiotic stresses, targeting diverse plant processes. HMs instigate the overproduction of reactive oxygen species (ROS), and to mitigate the adverse effects of ROS, plants induce multiple defence mechanisms. Besides the negative implications of overproduction of ROS, these molecules play a multitude of signalling roles in plants, acting as a central player in the complex signalling network of cells...
April 23, 2024: Plant, Cell & Environment
https://read.qxmd.com/read/38649988/neem-leaf-glycoprotein-binding-to-dectin-1-receptors-on-dendritic-cell-induces-type-1-immunity-through-card9-mediated-intracellular-signal-to-nf%C3%AE%C2%BAb
#5
JOURNAL ARTICLE
Nilanjan Ganguly, Tapasi Das, Avishek Bhuniya, Ipsita Guha, Mohona Chakravarti, Sukanya Dhar, Anirban Sarkar, Saurav Bera, Jesmita Dhar, Shayani Dasgupta, Akata Saha, Tithi Ghosh, Juhina Das, Ugir Hossain Sk, Saptak Banerjee, Subrata Laskar, Anamika Bose, Rathindranath Baral
BACKGROUND: A water-soluble ingredient of mature leaves of the tropical mahogany 'Neem' (Azadirachta indica), was identified as glycoprotein, thus being named as 'Neem Leaf Glycoprotein' (NLGP). This non-toxic leaf-component regressed cancerous murine tumors (melanoma, carcinoma, sarcoma) recurrently in different experimental circumstances by boosting prime antitumor immune attributes. Such antitumor immunomodulation, aid cytotoxic T cell (Tc )-based annihilation of tumor cells. This study focused on identifying and characterizing the signaling gateway that initiate this systemic immunomodulation...
April 23, 2024: Cell Communication and Signaling: CCS
https://read.qxmd.com/read/38649946/circprkd3-mir-6783-3p-responds-to-mechanical-force-to-facilitate-the-osteogenesis-of-stretched-periodontal-ligament-stem-cells
#6
JOURNAL ARTICLE
Jiani Liu, Rui Liu, Hong Wang, Zijie Zhang, Jixiao Wang, Fulan Wei
BACKGROUND: The mechanotransduction mechanisms by which cells regulate tissue remodeling are not fully deciphered. Circular RNAs (circRNAs) are crucial to various physiological processes, including cell cycle, differentiation, and polarization. However, the effects of mechanical force on circRNAs and the role of circRNAs in the mechanobiology of differentiation and remodeling in stretched periodontal ligament stem cells (PDLSCs) remain unclear. This article aims to explore the osteogenic function of mechanically sensitive circular RNA protein kinase D3 (circPRKD3) and elucidate its underlying mechanotransduction mechanism...
April 22, 2024: Journal of Orthopaedic Surgery and Research
https://read.qxmd.com/read/38648221/temperature-driven-coordination-of-circadian-transcriptional-regulation
#7
JOURNAL ARTICLE
Bingxian Xu, Dae-Sung Hwangbo, Sumit Saurabh, Clark Rosensweig, Ravi Allada, William L Kath, Rosemary Braun
The circadian clock is an evolutionarily-conserved molecular oscillator that enables species to anticipate rhythmic changes in their environment. At a molecular level, the core clock genes induce circadian oscillations in thousands of genes in a tissue-specific manner, orchestrating myriad biological processes. While previous studies have investigated how the core clock circuit responds to environmental perturbations such as temperature, the downstream effects of such perturbations on circadian regulation remain poorly understood...
April 22, 2024: PLoS Computational Biology
https://read.qxmd.com/read/38647984/harnessing-ceramic-hydroxyapatite-as-an-effective-polishing-strategy-to-remove-product-and-process-related-impurities-in-bispecific-antibody-purification
#8
JOURNAL ARTICLE
Nattha Ingavat, Xinhui Wang, Jia Min Liew, Farouq Bin Mahfut, Ka Pui But, Yee Jiun Kok, Xuezhi Bi, Yuansheng Yang, Kobayashi Shintaro, Maria Tsoumpra, Wei Zhang
Bispecific antibody (bsAb), a novel therapeutic modality, provides excellent treatment efficacy, yet poses numerous challenges to downstream process development, which are mainly due to the intricate diversity of bsAb structures and impurity profiles. Ceramic hydroxyapatite (CHT), a mixed-mode medium, allows proteins to interact with its calcium sites (C-sites) through metal affinity and/or its phosphate sites (P-sites) through cation exchange interactions. This dual-binding capability potentially offers unique bind and elute behaviours for different proteins of interest, resulting in optimal product purity when suitable elution conditions are employed...
December 13, 2023: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647931/modeling-the-behavior-of-monoclonal-antibodies-on-hydrophobic-interaction-chromatography-resins
#9
JOURNAL ARTICLE
Douglas Nolan, Thomas R Chin, Mick Eamsureya, Sheldon Oppenheim, Olga Paley, Christina Alves, George Parks
Monoclonal antibodies (mAbs) require a high level of purity for regulatory approval and safe administration. High-molecular weight (HMW) species are a common impurity associated with mAb therapies. Hydrophobic interaction chromatography (HIC) resins are often used to remove these HMW impurities. Determination of a suitable HIC resin can be a time and resource-intensive process. In this study, we modeled the chromatographic behavior of seven mAbs across 13 HIC resins using measurements of surface hydrophobicity, surface charge, and thermal stability for mAbs, and hydrophobicity and zeta-potential for HIC resins with high fit quality (adjusted R2  > 0...
February 15, 2024: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647846/cytotoxicity-of-subcritical-water-extracts-obtained-from-byproducts-generated-at-commercial-pecan-shelling-operations-on-cancer-cells
#10
JOURNAL ARTICLE
Canan Sevimli Gur, Nurhan Turgut Dunford, Zinar Pinar Gumus
This study examined potential of the extracts obtained from the byproducts generated at commercial pecan nut-shelling operations in cancer treatment. The subcritical water extracts obtained from two varieties, Native and Pawnee, were analyzed for their phenolic contents and compositions. Effects of the extracts on viability and IC50 of the human cell lines representing a broad range of cancer types, cervical, lung, skin, breast, colon and prostate cancers, were investigated. Although the effect of the temperature on the phenolic contents and compositions of the extracts was not statistically significant, the influence of the variety was extensive...
July 28, 2023: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647803/current-status-of-carbon-monoxide-dehydrogenases-codh-and-their-potential-for-electrochemical-applications
#11
REVIEW
Rebecca Bährle, Stefanie Böhnke, Jonas Englhard, Julien Bachmann, Mirjam Perner
Anthropogenic carbon dioxide (CO2 ) levels are rising to alarming concentrations in earth's atmosphere, causing adverse effects and global climate changes. In the last century, innovative research on CO2 reduction using chemical, photochemical, electrochemical and enzymatic approaches has been addressed. In particular, natural CO2 conversion serves as a model for many processes and extensive studies on microbes and enzymes regarding redox reactions involving CO2 have already been conducted. In this review we focus on the enzymatic conversion of CO2 to carbon monoxide (CO) as the chemical conversion downstream of CO production render CO particularly attractive as a key intermediate...
November 27, 2023: Bioresources and Bioprocessing
https://read.qxmd.com/read/38647647/trim28-fosters-microglia-ferroptosis-via-autophagy-modulation-to-enhance-neuropathic-pain-and-neuroinflammation
#12
JOURNAL ARTICLE
Jian Tang, Qi Chen, Li Xiang, Ting Tu, Ying Zhang, Cehua Ou
This study explores the molecular underpinnings of neuropathic pain (NPP) and neuroinflammation, focusing on the role of TRIM28 in the regulation of autophagy and microglia ferroptosis. Leveraging transcriptomic data associated with NPP, we identified TRIM28 as a critical regulator of ferroptosis. Through comprehensive analysis, including Gene Ontology enrichment and protein-protein interaction network assessments, we unveiled GSK3B as a downstream target of TRIM28. Experimental validation confirmed the capacity of TRIM28 to suppress GSK3B expression and attenuate autophagic processes in microglia...
April 22, 2024: Molecular Neurobiology
https://read.qxmd.com/read/38647456/effects-of-environmental-diversity-on-exploration-and-learning-the-case-of-bilingualism
#13
JOURNAL ARTICLE
Leher Singh, Rachel Barr, Paul C Quinn, Marina Kalashnikova, Joscelin Rocha-Hidalgo, Kate Freda, Dean D'Souza
Bilingual environments provide a commonplace example of increased complexity and uncertainty. Learning multiple languages entails mastery of a larger and more variable range of sounds, words, syntactic structures, pragmatic conventions, and more complex mapping of linguistic information to objects in the world. Recent research suggests that bilingual learners demonstrate fundamental variation in how they explore and learn from their environment, which may derive from this increased complexity. In particular, the increased complexity and variability of bilingual environments may broaden the focus of learners' attention, laying a different attentional foundation for learning...
April 22, 2024: Journal of Experimental Psychology. General
https://read.qxmd.com/read/38646515/optimizing-energy-efficiency-of-a-twin-screw-granulation-process-in-real-time-using-a-long-short-term-memory-lstm-network
#14
JOURNAL ARTICLE
Chaitanya Sampat, Rohit Ramachandran
Traditional pharmaceutical manufacturing processes for solid oral dosage forms can be inefficient and have been known to produce a large amount of undesired product. With the progressing trend of achieving carbon neutrality, there is an impetus to increase the energy efficiency of these manufacturing processes while maintaining the critical quality attributes of the product. One of the important steps in downstream pharmaceutical manufacturing is wet granulation, and within that, twin screw granulation (TSG) is a popular continuous manufacturing technique...
April 17, 2024: ACS Eng Au
https://read.qxmd.com/read/38645426/recent-advances-in-the-crosstalk-between-the-brain-derived-neurotrophic-factor-and-glucocorticoids
#15
REVIEW
Alexandros Tsimpolis, Konstantinos Kalafatakis, Ioannis Charalampopoulos
Brain-derived neurotrophic factor (BDNF), a key neurotrophin within the brain, by selectively activating the TrkB receptor, exerts multimodal effects on neurodevelopment, synaptic plasticity, cellular integrity and neural network dynamics. In parallel, glucocorticoids (GCs), vital steroid hormones, which are secreted by adrenal glands and rapidly diffused across the mammalian body (including the brain), activate two different groups of intracellular receptors, the mineralocorticoid and the glucocorticoid receptors, modulating a wide range of genomic, epigenomic and postgenomic events, also expressed in the neural tissue and implicated in neurodevelopment, synaptic plasticity, cellular homeostasis, cognitive and emotional processing...
2024: Frontiers in Endocrinology
https://read.qxmd.com/read/38645030/inactivation-of-a-non-canonical-gp130-signaling-arm-attenuates-chronic-systemic-inflammation-and-multimorbidity-induced-by-a-high-fat-diet
#16
Youngjoo Lee, Arijita Sarkar, Jade Tassey, Jonathan N Levi, Siyoung Lee, Nancy Q Liu, Andrew C Drake, Jenny Magallanes, Una Stevic, Jinxiu Lu, Dawei Ge, Hanhan Tang, Tadiwanashe Mkaratigwa, Fangzhou Bian, Ruzanna Shkhyan, Michael Bonaguidi, Denis Evseenko
Interleukin-6 (IL-6) is a major pro-inflammatory cytokine for which the levels in plasma demonstrate a robust correlation with age and body mass index (BMI) as part of the senescence-associated secretory phenotype. IL-6 cytokines also play a crucial role in metabolic homeostasis and regenerative processes, primarily via the canonical STAT3 pathway. Thus, selective modulation of IL-6 signaling may offer a unique opportunity for therapeutic interventions. Recently, we discovered that a non-canonical signaling pathway downstream of tyrosine (Y) 814 within the intracellular domain of gp130, the IL-6 co-receptor, is responsible for the recruitment and activation of SRC family of kinases (SFK)...
April 11, 2024: bioRxiv
https://read.qxmd.com/read/38644762/cytosolic-aba-receptor-kinases-phosphorylate-the-d6-protein-kinase-leading-to-its-stabilization-which-promotes-arabidopsis-growth
#17
JOURNAL ARTICLE
Juan He, Xiaoyi Li, Qin Yu, Lu Peng, Li Chen, Jiajia Liu, Jianmei Wang, Xufeng Li, Yi Yang
The polar auxin transport is required for proper plant growth and development. D6 PROTEIN KINASE (D6PK) is required for the phosphorylation of PIN-FORMED (PIN) auxin efflux carriers to regulate auxin transport, while the regulation of D6PK stabilization is still poorly understood. Here, we found that Cytosolic ABA Receptor Kinases (CARKs) redundantly interact with D6PK, and the interactions are dependent on CARKs' kinase activities. Similarly, CARK3 also could interact with paralogs of D6PK, including D6PKL1, D6PKL2, and D6PKL3...
April 22, 2024: Plant, Cell & Environment
https://read.qxmd.com/read/38644740/isolation-of-acute-myeloid-leukemia-blasts-from-blood-using-a-microfluidic-device
#18
JOURNAL ARTICLE
Alexandra Teixeira, Maria Sousa-Silva, Alexandre Chícharo, Kevin Oliveira, André Moura, Adriana Carneiro, Paulina Piairo, Hugo Águas, Belém Sampaio-Marques, Isabel Castro, José Mariz, Paula Ludovico, Sara Abalde-Cela, Lorena Diéguez
Acute myeloid leukemia (AML) is the most common form of acute leukemia in adults and associated with poor prognosis. Unfortunately, most of the patients that achieve clinical complete remission after the treatment will ultimately relapse due to the persistence of minimal residual disease (MRD), that is not measurable using conventional technologies in the clinic. Microfluidics is a potential tool to improve the diagnosis by providing early detection of MRD. Herein, different designs of microfluidic devices were developed to promote lateral and vertical mixing of cells in microchannels to increase the contact area of the cells of interest with the inner surface of the device...
April 22, 2024: Analyst
https://read.qxmd.com/read/38643910/alpapico-extraction-of-pico-frames-from-clinical-trial-documents-using-llms
#19
JOURNAL ARTICLE
Madhusudan Ghosh, Shrimon Mukherjee, Asmit Ganguly, Partha Basuchowdhuri, Sudip Kumar Naskar, Debasis Ganguly
In recent years, there has been a surge in the publication of clinical trial reports, making it challenging to conduct systematic reviews. Automatically extracting Population, Intervention, Comparator, and Outcome (PICO) from clinical trial studies can alleviate the traditionally time-consuming process of manually scrutinizing systematic reviews. Existing approaches of PICO frame extraction involves supervised approach that relies on the existence of manually annotated data points in the form of BIO label tagging...
April 19, 2024: Methods: a Companion to Methods in Enzymology
https://read.qxmd.com/read/38643868/inhibition-of-usp14-ameliorates-renal-ischemia-reperfusion-injury-by-reducing-tfap2a-stabilization-and-facilitating-mitophagy
#20
JOURNAL ARTICLE
Yang Li, Boqing Dong, Ying Wang, Huanjing Bi, Jing Zhang, Chenguang Ding, Chenge Wang, Xiaoming Ding, Wujun Xue
Mitochondrial dysfunction is recognized as a pivotal contributor to the pathogenesis of renal ischemia-reperfusion (IR) injury. Mitophagy, the process responsible for removing damaged protein aggregates, stands as a critical mechanism safeguarding cells against IR injury. Currently, the role of deubiquitination in regulating mitophagy still needs to be completely elucidated. This study aimed to evaluate the impact of ubiquitin-specific peptidase 14 (Usp14), a deubiquitinase, in IR injury by influencing mitophagy...
April 19, 2024: Translational Research: the Journal of Laboratory and Clinical Medicine
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