keyword
https://read.qxmd.com/read/36189473/the-statistical-fragility-of-management-options-for-acute-achilles-tendon-ruptures-a-systematic-review-of-randomized-control-trial-with-fragility-analysis
#21
REVIEW
Tom R Doyle, Martin S Davey, Eoghan T Hurley
IMPORTANCE: In the treatment of acute Achille's tendon rupture, there is no uniform consensus on which of the many treatment modalities for this common injury is superior with respect to all possible complications. This review is to assess the statistical quality of the available evidence. OBJECTIVES: The P value is the common method to determine the significance of a finding, but it does not convey statistical robustness. The reversal of a small number of outcome events can be enough to change a finding of significance; this is known as statistical fragility, which can be measured with the fragility index (FI) and fragility quotient (FQ)...
August 2022: Journal of ISAKOS
https://read.qxmd.com/read/36159977/genetic-structure-and-differentiation-from-early-bronze-age-in-the-mediterranean-island-of-sicily-insights-from-ancient-mitochondrial-genomes
#22
JOURNAL ARTICLE
Alessandra Modi, Maria Teresa Vizzari, Giulio Catalano, Rajiv Boscolo Agostini, Stefania Vai, Martina Lari, Chiara Vergata, Valentina Zaro, Lucia Liccioli, Mariaelena Fedi, Serena Barone, Lorenzo Nigro, Hovirag Lancioni, Alessandro Achilli, Luca Sineo, David Caramelli, Silvia Ghirotto
Sicily is one of the main islands of the Mediterranean Sea, and it is characterized by a variety of archaeological records, material culture and traditions, reflecting the history of migrations and populations' interaction since its first colonization, during the Paleolithic. These deep and complex demographic and cultural dynamics should have affected the genomic landscape of Sicily at different levels; however, the relative impact of these migrations on the genomic structure and differentiation within the island remains largely unknown...
2022: Frontiers in Genetics
https://read.qxmd.com/read/36092930/the-worldwide-spread-of-aedes-albopictus-new-insights-from-mitogenomes
#23
JOURNAL ARTICLE
Vincenza Battaglia, Vincenzo Agostini, Elisabetta Moroni, Giulia Colombo, Gianluca Lombardo, Nicola Rambaldi Migliore, Paolo Gabrieli, Maria Garofalo, Stella Gagliardi, Ludvik M Gomulski, Luca Ferretti, Ornella Semino, Anna R Malacrida, Giuliano Gasperi, Alessandro Achilli, Antonio Torroni, Anna Olivieri
The tiger mosquito ( Aedes albopictus) is one of the most invasive species in the world and a competent vector for numerous arboviruses, thus the study and monitoring of its fast worldwide spread is crucial for global public health. The small extra-nuclear and maternally-inherited mitochondrial DNA represents a key tool for reconstructing phylogenetic and phylogeographic relationships within a species, especially when analyzed at the mitogenome level. Here the mitogenome variation of 76 tiger mosquitoes, 37 of which new and collected from both wild adventive populations and laboratory strains, was investigated...
2022: Frontiers in Genetics
https://read.qxmd.com/read/36049287/sweet-light-o-mine-photothermal-and-photodynamic-inactivation-of-tenacious-pathogens-using-conjugated-polymers
#24
JOURNAL ARTICLE
Rodrigo A Ponzio, Luis E Ibarra, Estefanía E Achilli, Emmanuel Odella, Carlos A Chesta, Sol R Martínez, Rodrigo E Palacios
Each year a rising number of infections can not be successfully treated owing to the increasing pandemic of antibiotic resistant pathogens. The global shortage of innovative antibiotics fuels the emergence and spread of drug resistant microbes. Basic research, development, and applications of alternative therapies are urgently needed. Since the 90´s, light-mediated therapies have promised to be the next frontier combating multidrug-resistance microbes. These platforms have demonstrated to be a reliable, rapid, and efficient alternative to eliminate tenacious pathogens while avoiding the emergence of resistance mechanisms...
September 2022: Journal of Photochemistry and Photobiology. B, Biology
https://read.qxmd.com/read/35833360/pediatric-chronic-spontaneous-urticaria-a-brief-clinician-s-guide
#25
REVIEW
Martina Votto, Giovanna Achilli, Maria De Filippo, Amelia Licari, Alessia Marseglia, Alice Moiraghi, Antonio Di Sabatino, Gian Luigi Marseglia
INTRODUCTION: Chronic urticaria (CU) appears with daily or intermittent/recurrent wheals with/without angioedema for more than six weeks. When no specific eliciting factors are found, chronic urticaria is defined as spontaneous (CSU). Up to 50% of patients with CSU do not respond to therapy, leading to a prolonged disease course and the need for expensive therapies, impacting the quality of life (QoL) and healthcare resources. AREAS COVERED: Diagnosis of CSU is made when other potential causes of chronic urticaria are excluded...
September 2022: Expert Review of Clinical Immunology
https://read.qxmd.com/read/35792072/ordered-assembly-of-non-planar-vanadyl-tetraphenylporphyrins-on-ultra-thin-iron-oxide
#26
JOURNAL ARTICLE
Guglielmo Albani, Luca Schio, Francesco Goto, Alberto Calloni, Alessio Orbelli Biroli, Alberto Bossi, Francesco Melone, Simona Achilli, Guido Fratesi, Carlo Zucchetti, Luca Floreano, Gianlorenzo Bussetti
Stabilizing ordered assemblies of molecules represents the first step towards the construction of molecular devices featuring hybrid (organic-inorganic) interfaces where molecules can be easily functionalized in view of specific applications. Molecular layers of planar metal-tetraphenylporphyrins (MTPP) grown on an ultrathin iron oxide [namely Fe(001)- p (1 × 1)O] show indeed a high degree of structural order. The generality of such a picture is tested by exploiting non-planar porphyrins, such as vanadyl-TPP (VOTPP)...
July 6, 2022: Physical Chemistry Chemical Physics: PCCP
https://read.qxmd.com/read/35749022/laparoscopic-right-hemicolectomy-for-hepatic-flexure-adenocarcinoma-with-complete-mesocolic-excision-and-3d-ct-vascular-reconstruction
#27
JOURNAL ARTICLE
I Giusti, P Carnevali, C L Bertoglio, A Giani, P Achilli, S Grimaldi, M Origi, M Mazzola, C Magistro, G Ferrari
No abstract text is available yet for this article.
December 2022: Techniques in Coloproctology
https://read.qxmd.com/read/35743173/helena-s-many-daughters-more-mitogenome-diversity-behind-the-most-common-west-eurasian-mtdna-control-region-haplotype-in-an-extended-italian-population-sample
#28
JOURNAL ARTICLE
Martin Bodner, Christina Amory, Anna Olivieri, Francesca Gandini, Irene Cardinali, Hovirag Lancioni, Gabriela Huber, Catarina Xavier, Maria Pala, Alessandro Fichera, Lisa Schnaller, Mario Gysi, Stefania Sarno, Davide Pettener, Donata Luiselli, Martin B Richards, Ornella Semino, Alessandro Achilli, Antonio Torroni, Walther Parson
The high number of matching haplotypes of the most common mitochondrial (mt)DNA lineages are considered to be the greatest limitation for forensic applications. This study investigates the potential to solve this constraint by massively parallel sequencing a large number of mitogenomes that share the most common West Eurasian mtDNA control region (CR) haplotype motif (263G 315.1C 16519C). We augmented a pilot study on 29 to a total of 216 Italian mitogenomes that represents the largest set of the most common CR haplotype compiled from a single country...
June 16, 2022: International Journal of Molecular Sciences
https://read.qxmd.com/read/35712551/modeling-and-simulation-of-robotic-grasping-in-simulink-through-simscape-multibody
#29
JOURNAL ARTICLE
Maria Pozzi, Gabriele Maria Achilli, Maria Cristina Valigi, Monica Malvezzi
Grasping and dexterous manipulation remain fundamental challenges in robotics, above all when performed with multifingered robotic hands. Having simulation tools to design and test grasp and manipulation control strategies is paramount to get functional robotic manipulation systems. In this paper, we present a framework for modeling and simulating grasps in the Simulink environment, by connecting SynGrasp, a well established MATLAB toolbox for grasp simulation and analysis, and Simscape Multibody, a Simulink Library allowing the simulation of physical systems...
2022: Frontiers in Robotics and AI
https://read.qxmd.com/read/35709925/assessing-temporal-and-geographic-contacts-across-the-adriatic-sea-through-the-analysis-of-genome-wide-data-from-southern-italy
#30
JOURNAL ARTICLE
Alessandro Raveane, Ludovica Molinaro, Serena Aneli, Marco Rosario Capodiferro, Luciana de Gennaro, Linda Ongaro, Nicola Rambaldi Migliore, Sara Soffiati, Teodoro Scarano, Antonio Torroni, Alessandro Achilli, Mario Ventura, Luca Pagani, Cristian Capelli, Anna Olivieri, Francesco Bertolini, Ornella Semino, Francesco Montinaro
Southern Italy was characterised by a complex prehistory that started with different Palaeolithic cultures, later followed by the Neolithization and the demic dispersal from the Pontic-Caspian Steppe during the Bronze Age. Archaeological and historical evidences point to a link between Southern Italians and the Balkans still present in modern times. To shed light on these dynamics, we analysed around 700 South Mediterranean genomes combined with informative ancient DNAs. Our findings revealed high affinities of South-Eastern Italians with modern Eastern Peloponnesians, and a closer affinity of ancient Greek genomes with those from specific regions of South Italy than modern Greek genomes...
June 13, 2022: Genomics
https://read.qxmd.com/read/35688907/population-structure-allelic-variation-at-rht-b1-and-ppd-a1-loci-and-its-effects-on-agronomic-traits-in-argentinian-durum-wheat
#31
JOURNAL ARTICLE
Ana Laura Achilli, Pablo Federico Roncallo, Adelina Olga Larsen, Susanne Dreisigacker, Viviana Echenique
Exploring the genetic variability in yield and yield-related traits is essential to continue improving genetic gains. Fifty-nine Argentinian durum wheat cultivars were analyzed for important agronomic traits in three field experiments. The collection was genotyped with 3565 genome-wide SNPs and functional markers in order to determine the allelic variation at Rht-B1 and Ppd-A1 genes. Population structure analyses revealed the presence of three main groups, composed by old, modern and genotypes with European or CIMMYT ancestry...
June 10, 2022: Scientific Reports
https://read.qxmd.com/read/35641756/preparation-and-curation-of-phenotypic-datasets
#32
JOURNAL ARTICLE
Santiago Alvarez Prado, Fernando Hernández, Ana Laura Achilli, Agustina Amelong
Based on case studies, in this chapter we discuss the extent to which the number and identity of quantitative trait loci (QTL) identified from genome-wide association studies (GWAS) are affected by curation and analysis of phenotypic data. The chapter demonstrates through examples the impact of (1) cleaning of outliers, and of (2) the choice of statistical method for estimating genotypic mean values of phenotypic inputs in GWAS. No cleaning of outliers resulted in the highest number of dubious QTL, especially at loci with highly unbalanced allelic frequencies...
2022: Methods in Molecular Biology
https://read.qxmd.com/read/35617136/the-mitogenome-relationships-and-phylogeography-of-barn-swallows-hirundo-rustica
#33
JOURNAL ARTICLE
Gianluca Lombardo, Nicola Rambaldi Migliore, Giulia Colombo, Marco Rosario Capodiferro, Giulio Formenti, Manuela Caprioli, Elisabetta Moroni, Leonardo Caporali, Hovirag Lancioni, Simona Secomandi, Guido Roberto Gallo, Alessandra Costanzo, Andrea Romano, Maria Garofalo, Cristina Cereda, Valerio Carelli, Lauren Gillespie, Yang Liu, Yosef Kiat, Alfonso Marzal, Cosme López-Calderón, Javier Balbontín, Timothy A Mousseau, Piotr Matyjasiak, Anders Pape Møller, Ornella Semino, Roberto Ambrosini, Andrea Bonisoli Alquati, Diego Rubolini, Luca Ferretti, Alessandro Achilli, Luca Gianfranceschi, Anna Olivieri, Antonio Torroni
The barn swallow (Hirundo rustica) poses a number of fascinating scientific questions, including the taxonomic status of postulated subspecies. Here we obtained and assessed the sequence variation of 411 complete mitogenomes, mainly from the European H. r. rustica, but other subspecies as well. In almost every case, we observed subspecies-specific haplogroups, which we employed together with estimated radiation times to postulate a model for the geographical and temporal worldwide spread of the species. The female barn swallow carrying the Hirundo rustica ancestral mitogenome left Africa (or its vicinity) around 280 thousand years ago (kya), and her descendants expanded first into Eurasia and then, at least 51 kya, into the Americas, from where a relatively recent (< 20 kya) back migration to Asia took place...
May 25, 2022: Molecular Biology and Evolution
https://read.qxmd.com/read/35616431/steric-hindrance-in-the-on-surface-synthesis-of-diethynyl-linked-anthracene-polymers
#34
JOURNAL ARTICLE
Simona Achilli, Francesco Tumino, Andi Rabia, Alessio Orbelli Biroli, Andrea Li Bassi, Alberto Bossi, Nicola Manini, Giovanni Onida, Guido Fratesi, Carlo Spartaco Casari
Hybrid sp-sp2 structures can be efficiently obtained on metal substrates via on-surface synthesis. The choice of both the precursor and the substrate impacts on the effectiveness of the process and the stability of the formed structures. Here we demonstrate that using anthracene-based precursor molecules on Au(111) the formation of polymers hosting sp carbon chains is affected by the steric hindrance between aromatic groups. In particular, by scanning tunneling microscopy experiments and density functional theory simulations we show that the de-metalation of organometallic structures induces a lateral separation of adjacent polymers that prevents the formation of ordered domains...
May 26, 2022: Physical Chemistry Chemical Physics: PCCP
https://read.qxmd.com/read/35329598/capabilities-of-grazing-incidence-x-ray-diffraction-in-the-investigation-of-amorphous-mixed-oxides-with-variable-composition
#35
JOURNAL ARTICLE
Elisabetta Achilli, Filippo Annoni, Nicola Armani, Maddalena Patrini, Marina Cornelli, Leonardo Celada, Melanie Micali, Antonio Terrasi, Paolo Ghigna, Gianluca Timò
X-ray Diffraction has been fully exploited as a probe to investigate crystalline materials. However, very little research has been carried out to unveil its potentialities towards amorphous materials. In this work, we demonstrated the capabilities of Grazing Incidence X-ray Diffraction (GIXRD) as a simple and fast tool to obtain quantitative information about the composition of amorphous mixed oxides. In particular, we evidenced that low angle scattering features, associated with local structure parameters, show a significant trend as a function of the oxide composition...
March 15, 2022: Materials
https://read.qxmd.com/read/35084003/magnetic-properties-of-coordination-clusters-with-mn-4-and-co-4-antiferromagnetic-cores
#36
JOURNAL ARTICLE
Simona Achilli, Claire Besson, Xu He, Pablo Ordejón, Carola Meyer, Zeila Zanolli
We present a joint experimental and theoretical characterization of the magnetic properties of coordination clusters with an antiferromagnetic core of four magnetic ions. Two different compounds are analyzed, with Co and Mn ions in the core. While both molecules are antiferromagnetic, they display different sensitivities to external magnetic field, according to the different atomic magnetic moments and strength of the intra-molecular magnetic couplings. In particular, the dependence of the magnetization versus field of the two molecules switches with temperature: at low temperature the magnetization is smaller in {Mn4 } than in Co4 , while the opposite happens at high temperature...
January 27, 2022: Physical Chemistry Chemical Physics: PCCP
https://read.qxmd.com/read/35028735/mid-term-oncological-outcomes-after-complete-versus-conventional-mesocolic-excision-for-right-sided-colon-cancer-a-propensity-score-matching-analysis
#37
JOURNAL ARTICLE
Alessandro Giani, Camillo Leonardo Bertoglio, Michele Mazzola, Irene Giusti, Pietro Achilli, Pietro Carnevali, Matteo Origi, Carmelo Magistro, Giovanni Ferrari
BACKGROUND: The correct extent of mesocolic dissection for right-sided colon cancer (RCC) is still under debate. Complete mesocolic excision (CME) has not gained wide diffusion, mainly due to its technical complexity and unclear oncological superiority. This study aims to evaluate oncological outcomes of CME compared with non-complete mesocolic excision (NCME) during resection for I-III stage RCC. METHOD: Prospectively collected data of patients who underwent surgery between 2010 and 2018 were retrospectively analysed...
January 13, 2022: Surgical Endoscopy
https://read.qxmd.com/read/34946870/weaving-mitochondrial-dna-and-y-chromosome-variation-in-the-panamanian-genetic-canvas
#38
JOURNAL ARTICLE
Nicola Rambaldi Migliore, Giulia Colombo, Marco Rosario Capodiferro, Lucia Mazzocchi, Ana Maria Chero Osorio, Alessandro Raveane, Maribel Tribaldos, Ugo Alessandro Perego, Tomás Mendizábal, Alejandro García Montón, Gianluca Lombardo, Viola Grugni, Maria Garofalo, Luca Ferretti, Cristina Cereda, Stella Gagliardi, Richard Cooke, Nicole Smith-Guzmán, Anna Olivieri, Bethany Aram, Antonio Torroni, Jorge Motta, Ornella Semino, Alessandro Achilli
The Isthmus of Panama was a crossroads between North and South America during the continent's first peopling (and subsequent movements) also playing a pivotal role during European colonization and the African slave trade. Previous analyses of uniparental systems revealed significant sex biases in the genetic history of Panamanians, as testified by the high proportions of Indigenous and sub-Saharan mitochondrial DNAs (mtDNAs) and by the prevalence of Western European/northern African Y chromosomes. Those studies were conducted on the general population without considering any self-reported ethnic affiliations...
November 29, 2021: Genes
https://read.qxmd.com/read/34901816/modeling-the-energy-consumption-of-potable-water-reuse-schemes
#39
REVIEW
Emily W Tow, Anna Letcher Hartman, Aleksander Jaworowski, Ines Zucker, Soyoon Kum, Mojtaba AzadiAghdam, Ernest R Blatchley, Andrea Achilli, Han Gu, Gulsum Melike Urper, David M Warsinger
Potable reuse of municipal wastewater is often the lowest-energy option for increasing the availability of fresh water. However, limited data are available on the energy consumption of potable reuse facilities and schemes, and the many variables affecting energy consumption obscure the process of estimating energy requirements. By synthesizing available data and developing a simple model for the energy consumption of centralized potable reuse schemes, this study provides a framework for understanding when potable reuse is the lowest-energy option for augmenting water supply...
December 1, 2021: Water research X
https://read.qxmd.com/read/34829126/allelic-variation-at-glutenin-loci-glu-1-glu-2-and-glu-3-in-a-worldwide-durum-wheat-collection-and-its-effect-on-quality-attributes
#40
JOURNAL ARTICLE
Pablo F Roncallo, Carlos Guzmán, Adelina O Larsen, Ana L Achilli, Susanne Dreisigacker, Elena Molfese, Valentina Astiz, Viviana Echenique
Durum wheat grains ( Triticum turgidum L. ssp. durum ) are the main source for the production of pasta, bread and a variety of products consumed worldwide. The quality of pasta is mainly defined by the rheological properties of gluten, an elastic network in wheat endosperms formed of gliadins and glutenins. In this study, the allelic variation at five glutenin loci was analysed in 196 durum wheat genotypes. Two loci ( Glu-A1 and Glu-B1 ), encoding for high-molecular-weight glutenin subunits (HMW-GS), and three loci ( Glu-B2 , Glu-A3 and Glu-B3 ), encoding for low molecular weight glutenin subunits (LMW-GS), were assessed by SDS-PAGE...
November 18, 2021: Foods (Basel, Switzerland)
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