keyword
https://read.qxmd.com/read/38644691/comprehensive-analysis-of-n6-methylandenosine-related-lncrnas-in-clear-cell-renal-cell-carcinoma-a-correlation-with-prognosis-tumor-progression-and-therapeutic-response
#1
JOURNAL ARTICLE
Chang Meng, Juan Li, Xiang Wang, Yicen Ying, Zhihua Li, Aixiang Wang, Xuesong Li
This study aims to develop a prognostic signature based on m6A-related lncRNAs for clear cell renal cell carcinoma (ccRCC). Differential expression analysis and Pearson correlation analysis were used to identify m6A-related lncRNAs associated with patient outcomes in The Cancer Genome Atlas (TCGA) database. Our approach led to the development of an m6A-related lncRNA risk score (MRLrisk), formulated using six identified lncRNAs: NFE4, AL008729.2, AL139123.1, LINC02154, AC124854.1 and ARHGAP31-AS1. Higher MRLrisk was identified as a risk factor for patients' prognosis in ccRCC...
April 21, 2024: Cancer Investigation
https://read.qxmd.com/read/38641065/lncrna-serb-promotes-vasculogenic-mimicry-vm-formation-and-tumor-metastasis-in-renal-cell-carcinoma
#2
JOURNAL ARTICLE
Shuai Tang, Fangmin Chen, Jianghui Zhang, Fan Chang, Zheng Lv, Kai Li, Song Li, Yixi Hu, Shuyuan Yeh
A growing body of evidence shows that vasculogenic mimicry (VM) is closely related to the invasion and metastasis of many tumor cells. Although the estrogen receptor (ER) can promote initiation and progression of renal cell carcinoma (RCC), how downstream biomolecules are involved, and the detailed mechanisms of how ER expression is elevated in RCC remain to be further elucidated. Here, we discovered that LncRNA-SERB is highly expressed in tumor cells of RCC patients. We used multiple RCC cells and an in vivo mouse model for our study, and results indicated that LncRNA-SERB could boost RCC VM formation and cell invasion in vitro and in vivo...
April 17, 2024: Journal of Biological Chemistry
https://read.qxmd.com/read/38612724/association-between-pd-l1-expression-and-the-prognosis-and-clinicopathologic-features-of-non-clear-cell-renal-cell-carcinoma
#3
JOURNAL ARTICLE
Magdalena Chrabańska, Nikola Szweda-Gandor, Magdalena Rynkiewicz, Dominik Hraboš, Bogna Drozdzowska
PD-L1 is one of the two programmed cell death 1 (PD-1) ligands and a part of an immune checkpoint system (PD-1/PD-L1) with widespread clinical application. The aim of this study was to investigate PD-L1 expression and its association with clinicopathological and prognostic significance in non-clear cell renal cell carcinoma (non-ccRCC) patients. A total of 41 papillary (pRCC) and 20 chromophobe (chRCC) RCC tumors were examined for PD-L1 expression by immunohistochemistry in the cancer cells and tumor-infiltrating mononuclear cells (TIMCs)...
March 31, 2024: International Journal of Molecular Sciences
https://read.qxmd.com/read/38604810/treatment-free-survival-outcomes-from-the-phase-ii-study-of-nivolumab-and-salvage-nivolumab-ipilimumab-in-advanced-clear-cell-renal-cell-carcinoma-hcrn-gu16-260-cohort-a
#4
JOURNAL ARTICLE
Michael B Atkins, Opeyemi A Jegede, Naomi B Haas, David F Mcdermott, Mehmet A Bilen, Mark Stein, Jeffrey Sosman, Robert Alter, Elizabeth R Plimack, Moshe C Ornstein, Michael Hurwitz, David J Peace, David Einstein, Paul J Catalano, Hans Hammers, Meredith M Regan
BACKGROUND: As part of a partitioned survival analysis, treatment-free survival (TFS) can characterize the overall survival time patients spend between the cessation of immunotherapy and the start of subsequent therapy; both with and without toxicity. Significant TFS was reported for the nivolumab/ipilimumab arms of the CheckMate 067 and 214 trials for patients with advanced melanoma or renal cell carcinoma (aRCC), respectively, where immunotherapy was often halted for toxicity rather than a predefined treatment endpoint...
April 11, 2024: Journal for Immunotherapy of Cancer
https://read.qxmd.com/read/38602533/-update-of-the-german-s3-guideline-on-renal-cell-carcinoma
#5
REVIEW
C Doehn, L Bergmann, J Decker, T Gauler, V Grünwald, St Weikert, S Krege
BACKGROUND: Renal cell carcinoma is the third most common tumor among urological tumors. In Germany more than 14,000 people are affected every year. The sex ratio is 2/3 men and 1/3 women. OBJECTIVES: The S3 guideline is intended to provide all disciplines dealing with renal cell carcinoma with the current status of diagnostics, therapy and follow-up care of the patients with this tumor. MATERIALS AND METHODS: The first version of the German guideline on renal cell carcinoma was published in 2015...
April 11, 2024: Urologie
https://read.qxmd.com/read/38590368/treatment-of-metastatic-tfe3-microphthalmia-transcription-factor-translocation-renal-cell-carcinoma-a-case-report
#6
Yunlong Zhang, Changchun Li, Xiaobin Deng, Fumihiko Urabe, Mauricio Burotto, Sebastiano Buti, Giulia Claire Giudice, Zhenzhen Zhao, Chao Yang, Jian Sun, Yifei Du, Shan Wang
BACKGROUND: Microphthalmia-associated transcription factor/transcription factor E (MiTF/TFE) translocation renal cell carcinoma (RCC) is a rare type of non-clear cell RCC (nccRCC), which is more common in females. Currently, there is no standardized treatment for advanced metastatic microphthalmia translocation RCC (MiT-RCC). The main treatment modalities include surgery, chemotherapy, immunotherapy, anti-vascular endothelial growth factor or vascular endothelial growth factor receptor (VEGFR) inhibitors, mammalian target of rapamycin (mTOR) inhibitors, and targeted therapy against the mesenchymal-epithelial transition (MET) factor signaling pathway...
March 27, 2024: Translational Pediatrics
https://read.qxmd.com/read/38575409/papillary-renal-cell-carcinoma-outcomes-for-patients-receiving-first-line-immune-based-combinations-or-tyrosine-kinase-inhibitors-from-the-aron-1-study
#7
JOURNAL ARTICLE
Francesco Massari, Veronica Mollica, Ondrej Fiala, Ugo De Giorgi, Jakub Kucharz, Maria Giuseppa Vitale, Javier Molina-Cerrillo, Gaetano Facchini, Emmanuel Seront, Edoardo Lenci, Maria T Bourlon, Francesco Carrozza, Renate Pichler, Cristian Lolli, Zin W Myint, Ravindran Kanesvaran, Mariangela Torniai, Pasquale Rescigno, Alfonso Gomez de Liaño, Roubini Zakopoulou, Sebastiano Buti, Camillo Porta, Enrique Grande, Matteo Santoni
BACKGROUND AND OBJECTIVE: Papillary renal cell carcinoma (pRCC) is the most frequent histological subtype of non-clear cell RCC (nccRCC). Owing to the heterogeneity of nccRCC, patients are often excluded from large phase 3 trials focused on clear cell RCC, so treatment options for nccRCC remain limited. Our aim was to investigate the efficacy of first-line treatment with tyrosine kinase inhibitors (TKIs) or immuno-oncology (IO)-based combinations in patients with pRCC. METHODS: We performed a multicenter retrospective analysis of real-world data collected for patients with advanced pRCC treated in 40 centers in 12 countries as part of the ARON-1 project (NCT05287464)...
April 3, 2024: European Urology Oncology
https://read.qxmd.com/read/38571885/expression-of-hif%C3%A2-%C3%AE-and-their-association-with-clinicopathological-parameters-in-clinical-renal-cell-carcinoma
#8
JOURNAL ARTICLE
Raviprakash T Sitaram, Börje Ljungberg
OBJECTIVES: This study aimed to assess the cellular localization and expression levels of hypoxia-inducible factor (HIF) -α proteins (specifically HIF-1α, HIF-2α, and HIF-3α) that play a role in the hypoxia pathway and to determine their correlation with clinicopathological parameters and patient survival in renal cell carcinoma (RCC). MATERIALS AND METHODS: Tissue microarray (TMA) with cores from 150 clear cell RCCs and 31 non-ccRCC samples...
2024: Upsala Journal of Medical Sciences
https://read.qxmd.com/read/38554673/radiogenomic-analysis-based-on-lipid-metabolism-related-subset-for-non-invasive-prediction-for-prognosis-of-renal-clear-cell-carcinoma
#9
JOURNAL ARTICLE
Haifeng He, Yongzhi Xie, Fulong Song, Zhichao Feng, Pengfei Rong
PURPOSE: Multiple lipid metabolism pathways alterations are associated with clear cell renal cell carcinoma (ccRCC) development and aggressiveness. In this study, we aim to develop a novel radiogenomics signature based on lipid metabolism-related genes (LMRGs) that may accurately predict ccRCC patients' survival. MATERIALS AND METHODS: First, 327 ccRCC were used to screen survival-related LMRGs and construct a gene signature based on The Cancer Genome Atlas (TCGA) database...
March 16, 2024: European Journal of Radiology
https://read.qxmd.com/read/38549669/development-of-a-prognostic-model-based-on-different-disulfidptosis-related-genes-typing-for-kidney-renal-clear-cell-carcinoma
#10
JOURNAL ARTICLE
Yuanyuan Feng, Wenkai Wang, Shasha Jiang, Yongming Liu, Yan Wang, Xiangyang Zhan, Huirong Zhu, Guoqing Du
Background: Kidney renal clear cell carcinoma (KIRC) is a common and clinically significant subtype of kidney cancer. A potential therapeutic target in KIRC is disulfidptosis, a novel mode of cell death induced by disulfide stress. The aim of this study was to develop a prognostic model to explore the clinical significance of different disulfidptosis gene typings from KIRC. Methods: A comprehensive analysis of the chromosomal localization, expression patterns, mutational landscape, copy number variations, and prognostic significance of 10 disulfide death genes was conducted...
2024: Frontiers in Pharmacology
https://read.qxmd.com/read/38544395/casc19-an-oncogenic-long-non-coding-rna-in-different-cancers
#11
JOURNAL ARTICLE
Yinxin Wu, Jie Mou, Gang Zhou, Chengfu Yuan
A 324 bp lncRNA called CASC19 is found on chromosome 8q24.21. Recent research works have revealed that CASC19 is involved in the prognosis of tumors and related to the regulation of the radiation tolerance mechanisms during tumor radiotherapy (RT). This review sheds light on the changes and roles that CASC19 plays in many tumors and diseases, such as nasopharyngeal carcinoma (NPC), cervical cancer, colorectal cancer (CRC), non-small cell lung cancer (NSCLC), clear cell renal cell carcinoma (ccRCC), gastric cancer (GC), pancreatic cancer (PC), hepatocellular carcinoma (HCC), glioma, and osteoarthritis (OA)...
March 27, 2024: Current Pharmaceutical Design
https://read.qxmd.com/read/38538287/an-integrated-machine-learning-framework-identifies-prognostic-gene-pair-biomarkers-associated-with-programmed-cell-death-modalities-in-clear-cell-renal-cell-carcinoma
#12
JOURNAL ARTICLE
Bohong Chen, Mingguo Zhou, Li Guo, Haoxiang Huang, Xinyue Sun, Zihe Peng, Dapeng Wu, Wei Chen
BACKGROUND: Clear cell renal cell carcinoma (ccRCC) is a common and lethal urological malignancy for which there are no effective personalized therapeutic strategies. Programmed cell death (PCD) patterns have emerged as critical determinants of clinical prognosis and immunotherapy responses. However, the actual clinical relevance of PCD processes in ccRCC is still poorly understood. METHODS: We screened for PCD-related gene pairs through single-sample gene set enrichment analysis (ssGSEA), consensus cluster analysis, and univariate Cox regression analysis...
March 21, 2024: Frontiers in Bioscience (Landmark Edition)
https://read.qxmd.com/read/38530480/cancer-specific-mortality-in-non-metastatic-t1a-renal-cell-carcinoma-treated-with-radiotherapy-versus-partial-nephrectomy
#13
JOURNAL ARTICLE
Mario de Angelis, Simone Morra, Lukas Scheipner, Carolin Siech, Letizia Maria Ippolita Jannello, Andrea Baudo, Jordan A Goyal, Zhe Tian, Nicola Longo, Sascha Ahyai, Ottavio de Cobelli, Felix K H Chun, Fred Saad, Shahrokh F Shariat, Luca Carmignani, Francesco Montorsi, Alberto Briganti, Pierre I Karakiewicz
PURPOSE: Radiotherapy (RT) represents a treatment option for small renal masses with proven feasibility and tolerability. However, it has never been directly compared to partial nephrectomy (PN) with cancer-specific mortality (CSM) as an endpoint. METHODS: Within the Surveillance, Epidemiology, and End Results database (2004-2020), we identified T1aN0M0 renal cell carcinoma (RCC) patients treated with RT or PN. We relied on 1:1 propensity score matching (PSM) for age, tumor size and histology...
March 26, 2024: World Journal of Urology
https://read.qxmd.com/read/38512539/deep-learning-using-contrast-enhanced-ultrasound-images-to-predict-the-nuclear-grade-of-clear-cell-renal-cell-carcinoma
#14
JOURNAL ARTICLE
Yun Bai, Zi-Chen An, Fan Li, Lian-Fang Du, Tian-Wu Xie, Xi-Peng Zhang, Ying-Yu Cai
PURPOSE: To assess the effectiveness of a deep learning model using contrastenhanced ultrasound (CEUS) images in distinguishing between low-grade (grade I and II) and high-grade (grade III and IV) clear cell renal cell carcinoma (ccRCC). METHODS: A retrospective study was conducted using CEUS images of 177 Fuhrmangraded ccRCCs (93 low-grade and 84 high-grade) from May 2017 to December 2020. A total of 6412 CEUS images were captured from the videos and normalized for subsequent analysis...
March 21, 2024: World Journal of Urology
https://read.qxmd.com/read/38496821/integrative-analysis-of-germline-rare-variants-in-clear-and-non-clear-cell-renal-cell-carcinoma
#15
JOURNAL ARTICLE
Seung Hun Han, Sabrina Y Camp, Hoyin Chu, Ryan Collins, Riaz Gillani, Jihye Park, Ziad Bakouny, Cora A Ricker, Brendan Reardon, Nicholas Moore, Eric Kofman, Chris Labaki, David Braun, Toni K Choueiri, Saud H AlDubayan, Eliezer M Van Allen
BACKGROUND AND OBJECTIVE: Previous germline studies on renal cell carcinoma (RCC) have usually pooled clear and non-clear cell RCCs and have not adequately accounted for population stratification, which might have led to an inaccurate estimation of genetic risk. Here, we aim to analyze the major germline drivers of RCC risk and clinically relevant but underexplored germline variant types. METHODS: We first characterized germline pathogenic variants (PVs), cryptic splice variants, and copy number variants (CNVs) in 1436 unselected RCC patients...
April 2024: European urology open science
https://read.qxmd.com/read/38495834/integrative-analysis-and-risk-model-construction-for-super%C3%A2-enhancer%C3%A2-related-immune-genes-in-clear-cell-renal-cell-carcinoma
#16
JOURNAL ARTICLE
Zhenyu Bi, Jinghao Zhou, Yan Ma, Qingxin Guo, Boyang Ju, Haoran Zou, Zuhao Zhan, Feihong Yang, Han Du, Xiuguo Gan, Erlin Song
Clear cell renal cell carcinoma (ccRCC) is the most common type of kidney cancer associated with poor prognosis, and accounts for the majority of RCC-related deaths. The lack of comprehensive diagnostic and prognostic biomarkers has limited further understanding of the pathophysiology of ccRCC. Super-enhancers (SEs) are congregated enhancer clusters that have a key role in tumor processes such as epithelial-mesenchymal transition, metabolic reprogramming, immune escape and resistance to apoptosis. RCC may also be immunogenic and sensitive to immunotherapy...
May 2024: Oncology Letters
https://read.qxmd.com/read/38494257/identification-of-cuproptosis-related-lncrnas-signature-for-predicting-the-prognosis-in-patients-with-kidney-renal-clear-cell-carcinoma
#17
JOURNAL ARTICLE
Ya He, Hongxia Zhang, Jingang Li, Hui Zhou, Fei Wang, Guangliang Zhang, Yuetao Wen
BACKGROUND: Kidney renal clear cell carcinoma (KIRC), with low survival rate, is the most frequent subtype of renal cell carcinoma. Recently, more and more studies indicate that cuproptosis-related genes (CRGs) and long non-coding RNAs (lncRNAs) play a vital role in the occurrence and development of many types of cancers. However, the roles of cuproptosis-related lncRNAs (CRlncRNAs) in the KIRC was uncertain. RESULTS: In our study, CRlncRNAs were obtained by coexpression between differentially expressed and prognostic CRGs and differentially expressed and prognostic lncRNAs, and an 8-CRlncRNAs (AC007743...
March 2024: Journal, Genetic Engineering & Biotechnology
https://read.qxmd.com/read/38491523/machine-learning-driven-prognostic-analysis-of-cuproptosis-and-disulfidptosis-related-lncrnas-in-clear-cell-renal-cell-carcinoma-a-step-towards-precision-oncology
#18
JOURNAL ARTICLE
Ronghui Chen, Jun Wu, Yinwei Che, Yuzhuo Jiao, Huashan Sun, Yinuo Zhao, Pingping Chen, Lingxin Meng, Tao Zhao
Cuproptosis and disulfidptosis, recently discovered mechanisms of cell death, have demonstrated that differential expression of key genes and long non-coding RNAs (lncRNAs) profoundly influences tumor development and affects their drug sensitivity. Clear cell renal cell carcinoma (ccRCC), the most common subtype of kidney cancer, presently lacks research utilizing cuproptosis and disulfidptosis-related lncRNAs (CDRLRs) as prognostic markers. In this study, we analyzed RNA-seq data, clinical information, and mutation data from The Cancer Genome Atlas (TCGA) on ccRCC and cross-referenced it with known cuproptosis and disulfidptosis-related genes (CDRGs)...
March 16, 2024: European Journal of Medical Research
https://read.qxmd.com/read/38472549/the-long-term-outcomes-of-local-tumor-destruction-versus-partial-nephrectomy-for-ct1a-non-clear-cell-renal-cell-carcinoma-and-development-of-prognostic-nomograms
#19
JOURNAL ARTICLE
Jianhui Qiu, Ruiyi Deng, Zihou Zhao, Peidong Tian, Jingcheng Zhou
PURPOSE: There is a lack of authoritative opinions on local tumor destruction (LTD) for clinical T1a (cT1a) non-clear cell renal cell carcinoma (nccRCC). We aim to compare the outcomes of cT1a nccRCC after partial nephrectomy (PN) or LTD and explore prognostic factors. METHODS: Patients diagnosed with cT1a nccRCC receiving LTD or PN between 2000 and 2020 were identified from the Surveillance, Epidemiology, and End Results (SEER) database. A 1:1 propensity score matching (PSM) was performed for patients receiving LTD and PN...
March 12, 2024: Journal of Cancer Research and Clinical Oncology
https://read.qxmd.com/read/38470002/integrated-analysis-of-a-competing-endogenous-rna-network-reveals-a-ferroptosis-related-6-lncrna-prognostic-signature-in-clear-cell-renal-cell-carcinoma
#20
JOURNAL ARTICLE
Qing Zheng, Zhenqi Gong, Shaoxiong Lin, Dehua Ou, Weilong Lin, Peilin Shen
BACKGROUND: Establishing a robust signature for prognostic prediction and precision treatment is necessary due to the heterogeneous prognosis and treatment response of clear cell renal cell carcinoma (ccRCC). OBJECTIVES: This study set out to elucidate the biological functions and prognostic role of ferroptosis-related long non-coding RNAs (lncRNAs) based on a synthetic analysis of competing endogenous RNA networks in ccRCC. MATERIAL AND METHODS: Ferroptosis-related genes were obtained from the FerrDb database...
March 12, 2024: Advances in Clinical and Experimental Medicine: Official Organ Wroclaw Medical University
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