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PspA phylogeny

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https://www.readbyqxmd.com/read/23437306/disease-isolates-of-streptococcus-pseudopneumoniae-and-non-typeable-s-pneumoniae-presumptively-identified-as-atypical-s-pneumoniae-in-spain
#1
Dora Rolo, Alexandra S Simões, Arnau Domenech, Asunción Fenoll, Josefina Liñares, Hermínia de Lencastre, Carmen Ardanuy, Raquel Sá-Leão
We aimed to obtain insights on the nature of a collection of isolates presumptively identified as atypical Streptococcus pneumoniae recovered from invasive and non-invasive infections in Spain. One-hundred and thirty-two isolates were characterized by: optochin susceptibility in ambient and CO(2)-enriched atmosphere; bile solubility; PCR-based assays targeting pneumococcal genes lytA, ply, pspA, cpsA, Spn9802, aliB-like ORF2, and a specific 16S rRNA region; multilocus sequence analysis; and antimicrobial susceptibility...
2013: PloS One
https://www.readbyqxmd.com/read/21264340/monitoring-the-long-term-molecular-epidemiology-of-the-pneumococcus-and-detection-of-potential-vaccine-escape-strains
#2
Gagan A Pandya, M Catherine McEllistrem, Pratap Venepally, Michael H Holmes, Behnam Jarrahi, Ravi Sanka, Jia Liu, Svetlana A Karamycheva, Yun Bai, Robert D Fleischmann, Scott N Peterson
BACKGROUND: While the pneumococcal protein conjugate vaccines reduce the incidence in invasive pneumococcal disease (IPD), serotype replacement remains a major concern. Thus, serotype-independent protection with vaccines targeting virulence genes, such as PspA, have been pursued. PspA is comprised of diverse clades that arose through recombination. Therefore, multi-locus sequence typing (MLST)-defined clones could conceivably include strains from multiple PspA clades. As a result, a method is needed which can both monitor the long-term epidemiology of the pneumococcus among a large number of isolates, and analyze vaccine-candidate genes, such as pspA, for mutations and recombination events that could result in 'vaccine escape' strains...
2011: PloS One
https://www.readbyqxmd.com/read/20195536/the-genome-of-streptococcus-mitis-b6-what-is-a-commensal
#3
Dalia Denapaite, Reinhold Brückner, Michael Nuhn, Peter Reichmann, Bernhard Henrich, Patrick Maurer, Yvonne Schähle, Peter Selbmann, Wolfgang Zimmermann, Rolf Wambutt, Regine Hakenbeck
Streptococcus mitis is the closest relative of the major human pathogen S. pneumoniae. The 2,15 Mb sequence of the Streptococcus mitis B6 chromosome, an unusually high-level beta-lactam resistant and multiple antibiotic resistant strain, has now been determined to encode 2100 genes. The accessory genome is estimated to represent over 40%, including 75 mostly novel transposases and IS, the prophage phiB6 and another seven phage related regions. Tetracycline resistance mediated by Tn5801, and an unusual and large gene cluster containing three aminoglycoside resistance determinants have not been described in other Streptococcus spp...
2010: PloS One
https://www.readbyqxmd.com/read/11453254/identification-and-characterization-of-a-gene-encoding-a-subtilisin-like-serine-protease-induced-during-the-vegetative-incompatibility-reaction-in-podospora-anserina
#4
M Paoletti, M Castroviejo, J Bégueret, C Clavé
In the filamentous fungi, cell fusion between unlike individuals generally triggers a cell-death reaction known as vegetative incompatibility. In Podospora anserina, it was shown that, during this cell-death reaction, there is a strong increase in proteolytic activity. Here, we report the purification of a 36-kDa protease that is induced during the incompatibility reaction. An internal peptide of this protein displayed a strong similarity with the PEPC subtilisin-like serine protease from Aspergillus niger...
June 2001: Current Genetics
https://www.readbyqxmd.com/read/11274448/vipp1-deletion-mutant-of-synechocystis-a-connection-between-bacterial-phage-shock-and-thylakoid-biogenesis
#5
S Westphal, L Heins, J Soll, U C Vothknecht
Plant chloroplasts originated from an endosymbiotic event by which an ancestor of contemporary cyanobacteria was engulfed by an early eukaryotic cell and then transformed into an organelle. Oxygenic photosynthesis is the specific feature of cyanobacteria and chloroplasts, and the photosynthetic machinery resides in an internal membrane system, the thylakoids. The origin and genesis of thylakoid membranes, which are essential for oxygenic photosynthesis, are still an enigma. Vipp1 (vesicle-inducing protein in plastids 1) is a protein located in both the inner envelope and the thylakoids of Pisum sativum and Arabidopsis thaliana...
March 27, 2001: Proceedings of the National Academy of Sciences of the United States of America
https://www.readbyqxmd.com/read/11015380/pneumococcal-pspa-sequence-types-of-prevalent-multiresistant-pneumococcal-strains-in-the-united-states-and-of-internationally-disseminated-clones
#6
B Beall, G Gherardi, R R Facklam, S K Hollingshead
In a recent genotypic survey of beta-lactam-resistant pneumococci recovered in different areas of United States during 1997, eight clonal types that each represented 3 to 40 isolates accounted for 134 of 144 isolates (G. Gherardi, C. Whitney, R. Facklam, and B. Beall, J. Infect. Dis. 181:216-229, 2000). We determined the degree of pspA gene diversity among these 134 isolates and for 11 previously characterized internationally disseminated multiresistant strains. Thirty-four different pspA restriction profiles were determined for an amplicon encompassing the variable portion of the structural gene that encodes the surface-exposed domain of PspA and a variable-length proline-rich putative cell wall-associated domain...
October 2000: Journal of Clinical Microbiology
https://www.readbyqxmd.com/read/10569772/the-pspc-gene-of-streptococcus-pneumoniae-encodes-a-polymorphic-protein-pspc-which-elicits-cross-reactive-antibodies-to-pspa-and-provides-immunity-to-pneumococcal-bacteremia
#7
A Brooks-Walter, D E Briles, S K Hollingshead
PspC is one of three designations for a pneumococcal surface protein whose gene is present in approximately 75% of all Streptococcus pneumoniae strains. Under the name SpsA, the protein has been shown to bind secretory immunoglobulin A (S. Hammerschmidt, S. R. Talay, P. Brandtzaeg, and G. S. Chhatwal, Mol. Microbiol. 25:1113-1124, 1997). Under the name CbpA, the protein has been shown to interact with human epithelial and endothelial cells (C. Rosenow et al., Mol. Microbiol. 25:819-829, 1997). The gene is paralogous to the pspA gene in S...
December 1999: Infection and Immunity
https://www.readbyqxmd.com/read/8046101/definition-of-a-fundamental-repeating-unit-in-streptococcal-glucosyltransferase-glucan-binding-regions-and-related-sequences
#8
COMPARATIVE STUDY
P M Giffard, N A Jacques
The C-termini of the glucosyltransferases (Gtfs) of oral streptococci are responsible for glucan binding. These glucan-binding domains (GBDs) are composed of a series of repeated sequences that have been classified into four different classes (A-D) by virtue of sequence similarity and which, by inference, have been suggested to be of functional importance. In contrast, we propose that repeat sequences evolve in response to selection for an increase in the number of copies of a particular domain through multiple duplication events occurring at different times...
June 1994: Journal of Dental Research
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