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https://www.readbyqxmd.com/read/28340372/shotgun-metagenomic-sequencing-reveals-freshwater-beach-sands-as-reservoir-of-bacterial-pathogens
#1
Mahi M Mohiuddin, Yasser Salama, Herb E Schellhorn, G Brian Golding
Recreational waters and adjacent beach sands harbor complex microbial communities which may contain human pathogens that cannot be detected by conventional methods. Here, we investigate the diversity of bacterial populations inhabiting four freshwater beaches of the Great Lakes region using shotgun metagenomic sequencing approach. Our analysis suggests that average taxonomic richness and alpha diversity are significantly higher (P < 0.001) in beach sands compared to the corresponding water environments...
March 1, 2017: Water Research
https://www.readbyqxmd.com/read/28340307/genetic-diversity-analysis-of-asian-clam-corbicula-fluminea-in-the-hongze-lake-based-on-mitochondrial-cytochrome-b-gene
#2
Chuankun Zhu, Jin Li, Songguang Xie, Huaiyu Ding, Zhengjun Pan, Hui Wang, Guoliang Chang
The Asian clam Corbicula fluminea is a small bivalve with high nutritional and medical values. However, natural resources of C. fluminea have declined in many areas of China including the Hongze Lake. In this study, 119 individuals from 10 sites of this lake and 2 outgroups were analyzed using a 456 bp mitochondrial cytochrome b (cytb) gene segment. Totally, 19 polymorphic sites were detected, which defined 16 haplotypes. Polymorphism varied among the 10 populations with those at the water inlet being more polymorphic...
March 24, 2017: Mitochondrial DNA. Part A. DNA Mapping, Sequencing, and Analysis
https://www.readbyqxmd.com/read/28340263/myrciaria-dubia-an-amazonian-fruit-population-structure-and-its-implications-for-germplasm-conservation-and-genetic-improvement
#3
C F Nunes, T A Setotaw, M Pasqual, E A Chagas, E G Santos, D N Santos, C G B Lima, G M A Cançado
Myrciaria dubia (camu-camu) is an Amazon tree that produces a tart fruit with high vitamin C content. It is probably the fruit with the highest vitamin C content among all Brazilian fruit crops and it can be used to supplement daily vitamin C dose. This property has attracted the attention of consumers and, consequently, encouraged fruit farmers to produce it. In order to identify and select potential accessions for commercial exploitation and breeding programs, M. dubia has received considerable research attention...
March 22, 2017: Genetics and Molecular Research: GMR
https://www.readbyqxmd.com/read/28334407/organismal-and-spatial-partitioning-of-energy-and-macronutrient-transformations-within-a-hypersaline-mat
#4
Jennifer M Mobberley, Stephen R Lindemann, Hans C Bernstein, James J Moran, Ryan S Renslow, Jerome Babauta, Dehong Hu, Haluk Beyenal, William C Nelson
Phototrophic mat communities are model ecosystems for studying energy cycling and elemental transformations because complete biogeochemical cycles occur over millimeter-to-centimeter scales. Characterization of energy and nutrient capture within hypersaline phototrophic mats has focused on specific processes and organisms, however little is known about community-wide distribution of and linkages between these processes. To investigate energy and macronutrient capture and flow through a structured community, the spatial and organismal distribution of metabolic functions within a compact hypersaline mat community from Hot Lake have been broadly elucidated through species-resolved metagenomics and geochemical, microbial diversity, and metabolic gradient measurements...
March 15, 2017: FEMS Microbiology Ecology
https://www.readbyqxmd.com/read/28334326/allelopathy-mediated-competition-in-microbial-mats-from-antarctic-lakes
#5
Marc Slattery, Michael P Lesser
Microbial mats are vertically stratified communities that host a complex consortium of microorganisms, dominated by cyanobacteria, that compete for available nutrients and environmental niches, within these extreme habitats. The Antarctic Dry Valleys near McMurdo Sound include a series of lakes within the drainage basin that are bisected by glacial traverses. These lakes are traditionally independent, but recent increases in glacial melting have allowed two lakes (Chad and Hoare) to become connected by a meltwater stream...
February 18, 2017: FEMS Microbiology Ecology
https://www.readbyqxmd.com/read/28334256/distribution-of-invasive-cylindrospermopsis-raciborskii-in-the-east-central-europe-is-driven-by-climatic-and-local-environmental-variables
#6
Mikolaj Kokocinski, Ilona Gagala, Iwona Jasser, Jurate Karosiene, Jurate Kasperoviciene, Justyna Kobos, Judita Koreiviene, Janne Soininen, Agnieszka Szczurowska, Michal Woszczyk, Joanna Mankiewicz-Boczek
Mechanisms behind expansion of an invasive cyanobacterium Cylindrospermopsis raciborskii have not been fully resolved and different hypotheses, such as global warming, are suggested. In the East-Central Europe, it is widely occurring in western part of Poland but only in single locations in the East due to some limiting factors. Therefore, broad scale phytoplankton survey including 117 randomly selected lakes in Poland and Lithuania was conducted. The results showed that C. raciborskii occurred widely in western part of Poland but was absent from other regions and Lithuania except one lake...
March 9, 2017: FEMS Microbiology Ecology
https://www.readbyqxmd.com/read/28334157/overview-of-freshwater-microbial-eukaryotes-diversity-a-first-analysis-of-publicly-available-metabarcoding-data
#7
Didier Debroas, Isabelle Domaizon, Jean-Francois Humbert, Ludwig Jardillier, Cécile Lepère, Anne Oudart, Najwa Taïb
Although they are widespread, diverse, and involved in biogeochemical cycles, microbial eukaryotes attract less attention than their prokaryotic counterparts in environmental microbiology. In this study, we used publicly available 18S barcoding data to define biases that may limit such analyses and to gain an overview of the planktonic microbial eukaryotic diversity in freshwater ecosystems. The richness of the microbial eukaryotes was estimated to 100,798 operational taxonomic units (OTUs) delineating 1267 clusters or phylogenetic units (PUs i...
March 1, 2017: FEMS Microbiology Ecology
https://www.readbyqxmd.com/read/28334116/spatial-and-temporal-variability-in-the-nitrogen-cyclers-of-hypereutrophic-lake-taihu
#8
Lauren E Krausfeldt, Xiangming Tang, Jodie van de Kamp, Guang Gao, Levente Bodrossy, Gregory L Boyer, Steven W Wilhelm
Harmful cyanobacterial blooms (cyanoHABs) are a major threat to freshwater ecosystems worldwide. Evidence suggests that both nitrogen and phosphorus are important nutrients in the development and proliferation of blooms, yet much less is known about nitrogen cycling dynamics in these systems. To assess the potential nitrogen cycling function of the cyanoHAB community, surface water samples were collected in Lake Tai (Taihu), China over a 5-month bloom event in 2014. The expression of six nitrogen cycling genes (nifH, hzsA, nxrB, nrfA, amoA, nosZ) was surveyed using a targeted microarray with probes designed to provide phylogenetic information...
February 23, 2017: FEMS Microbiology Ecology
https://www.readbyqxmd.com/read/28333612/practicing-healing-cleaning-the-back-of-an-elderly-tibetan-woman
#9
James Lake
No abstract text is available yet for this article.
2017: Permanente Journal
https://www.readbyqxmd.com/read/28333563/effect-of-high-altitude-exposure-on-intraocular-pressure-using-goldmann-applanation-tonometry
#10
Gabriel Willmann, Kai Schommer, Maximilian Schultheiss, M Dominik Fischer, Karl-Ulrich Bartz-Schmidt, Florian Gekeler, Andreas Schatz
Willmann, Gabriel, Kai Schommer, Maximilian Schultheiss, M. Dominik Fischer, Karl-Ulrich Bartz-Schmidt, Florian Gekeler, and Andreas Schatz. Effect of high altitude exposure on intraocular pressure using Goldmann applanation tonometry. High Alt Med Biol. 00:000-000, 2017. AIMS: The aim of the study was to quantify changes of intraocular pressure (IOP) during exposure to 4559 m using the state-of-the-art method of Goldmann applanation tonometry for IOP measurement and to detect correlations between IOP and acute mountain sickness (AMS) in a prospective manner...
March 23, 2017: High Altitude Medicine & Biology
https://www.readbyqxmd.com/read/28333392/the-biosynthesis-of-nitrous-oxide-in-the-green-alga-chlamydomonas-reinhardtii
#11
Maxence Plouviez, David Wheeler, Andy Shilton, Michael A Packer, Patricia A McLenachan, Emanuel Sanz-Luque, Francisco Ocaña-Calahorro, Emilio Fernández, Benoit Guieysse
Over the last decades, several studies have reported emissions of nitrous oxide (N2 O) from microalgae cultures and aquatic ecosystems characterized by a high level of algal activity (e.g. eutrophic lakes). As N2 O is a potent greenhouse gas (GHG) and an ozone depleting pollutant, these findings suggest that large scale microalgae cultivation (and possibly, natural eutrophic ecosystems) could have significant environmental impacts. Using the model unicellular microalga Chlamydomonas reinhardtii, this study was conducted to investigate the molecular basis of microalgal N2 O synthesis...
March 23, 2017: Plant Journal: for Cell and Molecular Biology
https://www.readbyqxmd.com/read/28333061/diffusion-flux-of-phosphorus-nutrients-at-the-sediment-water-interface-of-the-ulansuhai-lake-in-northern-china
#12
Shengnan Zhao, Xiaohong Shi, Changyou Li, Sheng Zhang, Biao Sun, Yong Wu, Shuixia Zhao
Overlying water and sediment samples were collected from 11 locations in Ulansuhai Lake in June of 2012 to determine the concentration of dissolved inorganic phosphorus (DIP) in the interstitial water, overlying water and sediment and to estimate the diffusion flux of DIP at the sediment-water interface. The DIP levels in overlying water were 0.004-0.185 mg/L (average = 0.062 mg/L), while they were 0.05-0.25 mg/L (average = 0.124 mg/L) in the interstitial water in the 0-2 cm surface sediment. Moreover, the annual mean exchange flux of DIP in the sediment was between -0...
March 2017: Water Science and Technology: a Journal of the International Association on Water Pollution Research
https://www.readbyqxmd.com/read/28332516/environmental-sciences-troubled-waters-on-the-great-lakes
#13
Anna M Michalak
No abstract text is available yet for this article.
March 22, 2017: Nature
https://www.readbyqxmd.com/read/28332449/estimated-daily-intake-and-safety-of-fd-c-food-colour-additives-in-the-us-population
#14
Maria Bastaki, Thomas Farrell, Sachin Bhusari, Xiaoyu Bi, Carolyn Scrafford
A refined exposure assessment was undertaken to calculate the Estimated Daily Intake (EDI) of the seven FD&C straight colour additives and five FD&C colour lakes ("synthetic" food colours) approved in the United States (US). The EDIs were calculated for the US population as a whole and specific age groups, including children 2-5 y, children 6-12 y, adolescents 13-18 y, and adults 19+ y. Actual use data were collected from an industry survey of companies who are users of these colour additives in a variety of products, with additional input from food colour manufacturers...
March 23, 2017: Food Additives & Contaminants. Part A, Chemistry, Analysis, Control, Exposure & Risk Assessment
https://www.readbyqxmd.com/read/28331402/diversity-and-distribution-of-polyphagan-water-beetles-coleoptera-in-the-lake-st-lucia-system-south-africa
#15
Matthew S Bird, David T Bilton, Renzo Perissinotto
Water beetles belonging to the suborder Polyphaga vary greatly in larval and adult ecologies, and fulfil important functional roles in shallow-water ecosystems by processing plant material, scavenging and through predation. This study investigates the species richness and composition of aquatic polyphagan assemblages in and around the St Lucia estuarine lake (South Africa), within the iSimangaliso Wetland Park, a UNESCO World Heritage Site. A total of 32 sites were sampled over three consecutive collection trips between 2013 and 2015...
2017: ZooKeys
https://www.readbyqxmd.com/read/28331216/porewater-salinity-reveals-past-lake-level-changes-in-lake-van-the-earth-s-largest-soda-lake
#16
Yama Tomonaga, Matthias S Brennwald, David M Livingstone, Olga Kwiecien, Marie-Ève Randlett, Mona Stockhecke, Katie Unwin, Flavio S Anselmetti, Jürg Beer, Gerald H Haug, Carsten J Schubert, Mike Sturm, Rolf Kipfer
In closed-basin lakes, sediment porewater salinity can potentially be used as a conservative tracer to reconstruct past fluctuations in lake level. However, until now, porewater salinity profiles did not allow quantitative estimates of past lake-level changes because, in contrast to the oceans, significant salinity changes (e.g., local concentration minima and maxima) had never been observed in lacustrine sediments. Here we show that the salinity measured in the sediment pore water of Lake Van (Turkey) allows straightforward reconstruction of two major transgressions and a major regression that occurred during the last 250 ka...
March 22, 2017: Scientific Reports
https://www.readbyqxmd.com/read/28330510/an-integrated-environmental-improvement-of-marshlands-impact-on-control-and-elimination-of-schistosomiasis-in-marshland-regions-along-the-yangtze-river-china
#17
Le-Ping Sun, Wei Wang, Yin-Ping Zuo, Zheng-Qiu Zhang, Qing-Biao Hong, Guo-Jing Yang, Hong-Ru Zhu, You-Sheng Liang, Hai-Tao Yang
BACKGROUND: Schistosomiasis is a global snail-transmitted infectious disease of poverty. Transmission control had been achieved in China in 2015 after the control efforts for over 60 years. Currently, the remaining core regions endemic for Schistosoma japonicum are mainly located in the marshland and lake regions along the Yangtze River basin. METHODS: During the period from 2001 through 2015, an integrated environmental improvement of the marshlands was carried out through the implementation of industrial, agricultural and resources development projects in Yizheng County along the Yangtze River...
March 22, 2017: Infectious Diseases of Poverty
https://www.readbyqxmd.com/read/28329713/pcbs-and-ocps-in-human-milk-in-eastern-siberia-russia-levels-temporal-trends-and-infant-exposure-assessment
#18
Elena A Mamontova, Eugenia N Tarasova, Alexander A Mamontov
The aim of our study is to investigate the spatial distribution of polychlorinated biphenyls (PCBs), hexachlorobenzene (HCB), dichlorodiphenyltrichloroethane (p,p'-DDT) and its metabolites, α- and γ-isomers of hexachlorocyclohexane (HCH) in 155 samples of human milk (HM) from Eastern Siberia (six towns and seven villages in Irkutsk Region, one village of the Republic of Buryatia and one town in Zabaikal'sk Region, Russia), and to examine the dietary and social factors influencing the human exposure to the organochlorines...
March 19, 2017: Chemosphere
https://www.readbyqxmd.com/read/28329372/practical-review-of-recognition-and-management-of-obesity-and-lipohypertrophy-in-hiv-infection
#19
Jordan E Lake, Takara Stanley, Caroline Apovian, Shalendar Bhasin, Todd T Brown, Jaqueline Capeau, Judith S Currier, Michael P Dube, Julian Falutz, Steven K Grinspoon, Giovanni Guaraldi, Esteban Martinez, Grace A McComsey, Fred R Sattler, Kristine M Erlandson
Background: Obesity and lipohypertrophy are common in treated HIV infection and contribute to morbidity and mortality among HIV-infected adults on antiretroviral therapy (ART). Methods: We present a consensus opinion on the diagnosis, clinical consequences and treatment of excess adiposity in adults with treated HIV infection. Results: Obesity and lipohypertrophy commonly occur among HIV-infected adults on ART, and may have overlapping pathophysiologies and/or synergistic metabolic consequences...
February 24, 2017: Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America
https://www.readbyqxmd.com/read/28329275/tissue-characterization-by-t1-and-t2-mapping-cardiovascular-magnetic-resonance-imaging-to-monitor-myocardial-inflammation-in-healing-myocarditis
#20
S Bohnen, U K Radunski, G K Lund, F Ojeda, Y Looft, M Senel, L Radziwolek, M Avanesov, E Tahir, C Stehning, B Schnackenburg, G Adam, S Blankenberg, K Muellerleile
Aims: Monitoring disease activity in myocarditis is important for tailored therapeutic strategies. This study evaluated the ability of T1 and T2 mapping cardiovascular magnetic resonance (CMR) to monitor the course of myocardial inflammation in healing myocarditis. Methods and results: Forty-eight patients with strictly defined acute myocarditis underwent CMR at 1.5 T in the acute stage, at 3-months (n = 39), and at 12-months follow-up (FU) (n = 21). Normal values were obtained in a control group of 27 healthy subjects...
March 8, 2017: European Heart Journal Cardiovascular Imaging
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