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https://www.readbyqxmd.com/read/27913419/benzene-degradation-by-variovorax-sp-within-a-coal-tar-contaminated-groundwater-microbial-community
#1
Kevin M Posman, Christopher M DeRito, Eugene L Madsen
: Investigations of environmental microbial communities are crucial for the discovery of populations capable of degrading hazardous compounds and may lead to improved bioremediation strategies. The goal of this study was to identify microorganisms responsible for aerobic benzene degradation in coal-tar contaminated groundwater. Benzene degradation was monitored in laboratory incubations of well waters using gas chromatography mass spectrometry (GC/MS). Stable isotope probing (SIP) experiments using (13)C-benzene allowed us to obtain (13)C-labled community DNA; from this, 16S rRNA clone libraries identified γ- and β-Proteobacteria as the active benzene metabolizing microbial populations...
December 2, 2016: Applied and Environmental Microbiology
https://www.readbyqxmd.com/read/27913395/metabolomic-characterization-of-hepatocellular-carcinoma-in-patients-with-liver-cirrhosis-for-biomarker-discovery
#2
Cristina Di Poto, Alessia Ferrarini, Yi Zhao, Rency S Varghese, Chao Tu, Yiming Zuo, Minkun Wang, Mohammad R Nezami Ranjbar, Yue Luo, Chi Zhang, Chirag S Desai, Kirti Shetty, Mahlet G Tadesse, Habtom W Ressom
BACKGROUND: Metabolomics plays an important role in providing insight into the etiology and mechanisms of hepatocellular carcinoma (HCC). This is accomplished by a comprehensive analysis of patterns involved in metabolic alterations in human specimens. This study compares the levels of plasma metabolites in HCC cases versus cirrhotic patients and evaluates the ability of candidate metabolites in distinguishing the two groups. Also, it investigates the combined use of metabolites and clinical covariates for detection of HCC in patients with liver cirrhosis...
December 2, 2016: Cancer Epidemiology, Biomarkers & Prevention
https://www.readbyqxmd.com/read/27912966/structure-related-related-new-approach-in-the-gc-ms-analysis-of-cathinone-type-synthetic-drugs
#3
Borbála Molnár, Blanka Fodor, Antal Csámpai, Előd Hidvégi, Ibolya Molnár-Perl
A novel, structure-related derivatization principle has been developed in order to quantify cathinone-type synthetic drugs (CTSDs), focusing on the most common pentedrone (PENT), including also 4-fluoromethcathinone (4-FMC), methcathinone (MCTN), 4-methylethcathinone (4-MEC), 3,4-dimethylmethcathinone (3,4-DMMC), and 4-ethylmethcathinone (4-EMC). Firstly, oximated and, secondly, trimethylsilylated CTSD derivatives were characterized by mass fragmentation patterns using GC/MS that led to the development of a harmonized, quantitative, two-steps derivatization methodology...
November 22, 2016: Journal of Chromatography. A
https://www.readbyqxmd.com/read/27912912/passive-air-sampling-of-persistent-organic-pollutants-pops-and-emerging-compounds-in-kolkata-megacity-and-rural-mangrove-wetland-sundarban-in-india-an-approach-to-regional-monitoring
#4
Karla Pozo, Santosh Kumar Sarkar, Victor H Estellano, Soumita Mitra, Ondrej Audi, Petr Kukucka, Petra Přibylová, Jana Klánová, Simonetta Corsolini
Polyurethane foam (PUF) disk passive air samplers were deployed concurrently at five sites across Kolkata megacity and the rural mangrove wetland of Sundarban (UNESCO World Heritage Site) between January-March in 2014. Samples were analyzed for hexachlorocyclohexanes (HCHs), dichlorodiphenyltricholoroethanes (DDTs), polychlorinated biphenyls (PCBs) and, polybrominated diphenyl ethers (PBDEs) using gas chromatography and mass spectrometry (GC-MS). Derived air concentrations (pg/m(3)) for Kolkata ranged: for ∑α- and γ-HCH between 70 and 207 (114 ± 62), ∑6DDTs: 127-216 (161 ± 36), ∑7PCBs: 53-213 (141 ± 64), and ∑10PBDEs: 0...
November 29, 2016: Chemosphere
https://www.readbyqxmd.com/read/27912874/the-anxiolytic-effect-of-essential-oil-of-cananga-odorata-exposure-on-mice-and-determination-of-its-major-active-constituents
#5
Nan Zhang, Lei Zhang, Linyin Feng, Lei Yao
BACKGROUND: Essential oil from Cananga odorata (ylang-ylang essential oil, YYO) is usually used in reducing blood pressure, improving cognitive functioning in aromatherapy in human. Few reports showed its effect on anxiety behaviors. HYPOTHESIS/PURPOSE: To investigate the anxiolytic effects of YYO exposure on anxiety animal models, determine the major active constituents and investigate the change of neurotransmitters after odor exposure. STUDY DESIGN AND METHODS: ICR mice were subjected to three anxiety models including open field, elevated plus maze and light-dark box tests after acute and chronic YYO exposure...
December 15, 2016: Phytomedicine: International Journal of Phytotherapy and Phytopharmacology
https://www.readbyqxmd.com/read/27912872/anti-allergic-potential-of-typhonium-blumei-inhibition-of-degranulation-via-suppression-of-pi3k-plc%C3%AE-2-phosphorylation-and-calcium-influx
#6
Michal Korinek, Kuan-Ming Chen, Yu-Han Jiang, Mohamed El-Shazly, Joel Stocker, Chon-Kit Chou, Tsong-Long Hwang, Yang-Chang Wu, Bing-Hung Chen, Fang-Rong Chang
BACKGROUND: Typhonium blumei Nicolson & Sivadasan (Araceae) is a traditional Chinese medicinal herb possessing detumescent, detoxifying, and anti-inflammatory activities. It is used in Taiwan as a folk medicine to treat cancer and inflammatory diseases. Typhonium blumei is usually not distinguished from Typhonium roxburghii Schott and they are commonly used interchangeably. PURPOSE: To evaluate and compare the anti-allergic and anti-inflammatory properties of T...
December 15, 2016: Phytomedicine: International Journal of Phytotherapy and Phytopharmacology
https://www.readbyqxmd.com/read/27911220/optimization-of-a-textile-dye-degradation-in-a-recirculating-fluidized-bed-reactor-using-magnetite-s2o8-2-process
#7
Hassan Aghdasinia, Parvin Arehjani, Behrouz Vahid, Alireza Khataee
Optimization of Acid Orange 7 (AO7) treatment using heterogeneous Fenton-like method in a recirculating fluidized-bed reactor (FBR) was investigated by central composite design (CCD). Natural magnetite (NM) as Fenton-like catalyst was characterized using scanning electron microscopy (SEM). Nonlinear CCD model was obtained for prediction of dye degradation as a function of experimental variables such as peroxydisulfate concentration (0.1-0.5 mmol/L), initial AO7 concentration (5-25 mg/L), pH (3-9) and NM dosage (0...
December 2, 2016: Environmental Technology
https://www.readbyqxmd.com/read/27911010/screening-of-mercury-resistant-and-indole-3-acetic-acid-producing-bacterial-consortium-for-growth-promotion-of-cicer-arietinum-l
#8
Aatif Amin, Zakia Latif
Mercury resistant (Hg(R) ) bacteria were screened from industrial effluents and effluents-polluted rhizosphere soils near to districts Kasur and Sheikhupura, Pakistan. Out of 60 isolates, three bacterial strains, Bacillus sp. AZ-1, Bacillus cereus AZ-2, and Enterobacter cloacae AZ-3 showed Hg-resistance as 20 μg ml(-1) of HgCl2 and indole-3-acetic acid (IAA) production as 8-38 μg ml(-1) . Biochemical and molecular characterization of selected bacteria was confirmed by 16S ribotyping. Mercury resistant genes merA, merB, and merE of mer operon in Bacillus spp...
December 2, 2016: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27904751/association-of-serum-concentrations-of-persistent-organic-pollutants-pops-and-risk-of-pre-eclampsia-a-case-control-study
#9
Bita Eslami, Hossein Malekafzali, Noushin Rastkari, Batool Hossein Rashidi, Abolghasem Djazayeri, Kazem Naddafi
BACKGROUND: There is increasing evidence that persistent organic pollutants (POPs) may contribute to pre-eclampsia. The objective of this study was to evaluate the association between Polychlorinated Biphenyls (PCBs) and Polybrominated Diphenyl Ethers (PBDEs) as POPs with pre-eclampsia. METHODS: This case-control study was performed in the three general university hospitals of Tehran University of Medical Sciences. Serum samples were collected from cases (n = 45) who had diagnosed with preeclampsia and from control samples (n = 70) with normal pregnancy and attended the same hospital for a routine prenatal visit at the third trimester of pregnancy...
2016: Journal of Environmental Health Science & Engineering
https://www.readbyqxmd.com/read/27904455/profiling-of-disease-related-metabolites-in-grapevine-internode-tissues-infected-with-agrobacterium-vitis
#10
Sung-Min Jung, Youn-Young Hur, John E Preece, Oliver Fiehn, Young-Ho Kim
Green shoot cuttings of 10 different grapevine species were inoculated with Agrobacterium vitis to find disease-related metabolites in the grapevine. Crown galls formed 60 days after inoculation varied in gall severity (GS) evaluated by gall incidence (GI) and gall diameter (GD), which were classified into three response types as RR (low GI and small GD), SR (high GI and small GD), and SS (high GI and large GD), corresponding to resistant, moderately resistant, and susceptible responses, respectively. In this, 4, 4, and 2 Vitis species were classified into RR, SR, and SS, respectively...
December 2016: Plant Pathology Journal
https://www.readbyqxmd.com/read/27903654/carbon-and-acyl-chain-flux-during-stress-induced-triglyceride-accumulation-by-stable-isotopic-labeling-of-the-polar-microalga-coccomyxa-subellipsoidea-c169
#11
James W Allen, Concetta C DiRusso, Paul N Black
Deriving biofuels and other lipoid products from algae is a promising future technology directly addressing global issues of atmospheric CO2 balance. To better understand the metabolism of triglyceride synthesis in algae, we examined their metabolic origins in the model species, Coccomyxa subellipsoidea C169, using stable isotopic labeling. Labeling patterns arising from (13)C-U-glucose, (13)CO2, or D2O supplementation were analyzed by GC-MS and/or LC-MS over time courses during nitrogen (N) starvation to address the roles of catabolic carbon (C) recycling, acyl chain redistribution, and de novo fatty acid (FA) synthesis during the expansion of the lipid bodies...
November 30, 2016: Journal of Biological Chemistry
https://www.readbyqxmd.com/read/27902927/antidiabetic-activity-of-ganoderma-lucidum-polysaccharides-f31-down-regulated-hepatic-glucose-regulatory-enzymes-in-diabetic-mice
#12
Chun Xiao, Qingping Wu, Jumei Zhang, Yizhen Xie, Wen Cai, Jianbin Tan
ETHNOPHARMACOLOGICAL RELEVANCE: Ganoderma lucidum (Lin Zhi) has been used to treat diabetes in Chinese folk for centuries. Our laboratory previously demonstrated that Ganoderma lucidum polysaccharides (GLPs) had hypoglycemic effects in diabetic mice. Our aim was to identify the main bioactives in GLPs and corresponding mechanism of action. MATERIALS AND METHODS: Four polysaccharide-enriched fraction were isolated from GLPs and the antidiabetic activities were evaluated by type 2 diabetic mice...
November 27, 2016: Journal of Ethnopharmacology
https://www.readbyqxmd.com/read/27900358/structural-and-antitrypanosomal-data-of-different-carbasones-of-piperitone
#13
Amoussatou Sakirigui, Fernand Gbaguidi, Urbain C Kasséhin, Jacques Poupaert, Georges C Accrombessi, Simeon O Kotchoni
This article reports data on four carbazones of piperitone: semicarbazone 1, thiosemicarbazone 2, 4-phenyl semicarbazone 3 and 4-phenyl thiosemicarbazone 4 prepared directly in situ from essential oil of Cymbopogon schoenantus, whose GC-FID and GC-MS analysis revealed piperitone as major component (68.20%). The structures of hemi-synthesized compounds were confirmed by high throughput IR, MS, (1)H and (13)C NMR based spectrometric analysis. Their antiparasitic activities were evaluated in vitro on Trypanosoma brucei brucei (Tbb)...
December 2016: Data in Brief
https://www.readbyqxmd.com/read/27899920/impacts-of-fertilization-regimes-on-arbuscular-mycorrhizal-fungal-amf-community-composition-were-correlated-with-organic-matter-composition-in-maize-rhizosphere-soil
#14
Chen Zhu, Ning Ling, Junjie Guo, Min Wang, Shiwei Guo, Qirong Shen
The understanding of the response of arbuscular mycorrhizal fungi (AMF) community composition to fertilization is of great significance in sustainable agriculture. However, how fertilization influences AMF diversity and composition is not well-established yet. A field experiment located in northeast China in typical black soil (Chernozem) was conducted and high-throughput sequencing approach was used to investigate the effects of different fertilizations on the variation of AMF community in the rhizosphere soil of maize crop...
2016: Frontiers in Microbiology
https://www.readbyqxmd.com/read/27898320/catalytic-pyrolysis-of-natural-algae-over-mg-al-layered-double-oxides-zsm-5-mgal-ldo-zsm-5-for-producing-bio-oil-with-low-nitrogen-content
#15
Lijing Gao, Jiahui Sun, Wei Xu, Guomin Xiao
Cyanobacteria were catalytically pyrolyzed over Mg-Al layered double oxide/ZSM-5 composites (MgAl-LDO/ZSM-5) to produce bio-oil. MgAl-LDO/ZSM-5 with a Mg/Al molar ratio of four was proved to be the best catalyst. Under the optima condition that the final temperature was 823K, heating rate was 10K/min and catalyst/algae mass ratio was 0.75, a maximum yield of liquid (41.1%) was achieved at 823K with a heating rate of 10K/min and a catalyst/algae mass ratio of 0.75, which was much higher than the one obtained without catalyst...
November 22, 2016: Bioresource Technology
https://www.readbyqxmd.com/read/27896555/methyl-jasmonate-induced-monoterpenes-in-scots-pine-and-norway-spruce-tissues-affect-pine-weevil-orientation
#16
Lina Lundborg, Göran Nordlander, Niklas Björklund, Henrik Nordenhem, Anna-Karin Borg-Karlson
In large parts of Europe, insecticide-free measures for protecting conifer plants are desired to suppress damage by the pine weevil Hylobius abietis (L.). Treatment with methyl jasmonate (MeJA), a chemical elicitor already used in crop production, may enhance expression of chemical defenses in seedlings in conifer regenerations. However, in a previous experiment, MeJA treatment resulted in substantially better field protection for Scots pine (Pinus sylvestris L.) than for Norway spruce (Picea abies (L.) Karst...
November 28, 2016: Journal of Chemical Ecology
https://www.readbyqxmd.com/read/27896547/chemical-analysis-of-a-miller-type-complex-prebiotic-broth-part-ii-gas-oil-water-and-the-oil-water-interface
#17
Sabrina Scherer, Eva Wollrab, Luca Codutti, Teresa Carlomagno, Stefan Gomes da Costa, Andreas Volkmer, Amela Bronja, Oliver J Schmitz, Albrecht Ott
We have analyzed the chemical variety obtained by Miller-Urey-type experiments using nuclear magnetic resonance (NMR) spectroscopy and coherent anti-Stokes Raman scattering (CARS) spectroscopy, gas chromatography followed by mass spectrometry (GC/MS) and two-dimensional gas chromatography followed by mass spectrometry (GCxGC/MS). In the course of a running Miller-Urey-type experiment, a hydrophobic organic layer emerged besides the hydrophilic aqueous phase and the gaseous phase that were initially present...
November 28, 2016: Origins of Life and Evolution of the Biosphere
https://www.readbyqxmd.com/read/27896384/uptake-of-total-petroleum-hydrocarbon-tph-and-polycyclic-aromatic-hydrocarbons-pahs-by-oryza-sativa-l-grown-in-soil-contaminated-with-crude-oil
#18
Rupshikha Patowary, Kaustuvmani Patowary, Arundhuti Devi, Mohan Chandra Kalita, Suresh Deka
The purpose of this study was to determine whether total petroleum hydrocarbon (TPH) and polycyclic aromatic hydrocarbons (PAHs) present in crude oil contaminated sites are transferred to roots, shoots and finally the grains of rice crops (Oryza sativa L.) grown in those sites. Soil was artificially contaminated with crude oil at concentrations of 0, 1000, 5000, 10,000, and 15,000 mg/kg, followed by planting of rice seedlings. After harvest, TPH in plant samples were measured, and it was determined that the uptake of TPH by the plants gradually increased as the concentration of oil in soil increased...
November 28, 2016: Bulletin of Environmental Contamination and Toxicology
https://www.readbyqxmd.com/read/27894697/an-innovative-ultrasound-assisted-extraction-micro-scale-cell-combined-with-gas-chromatography-mass-spectrometry-in-negative-chemical-ionization-to-determine-persistent-organic-pollutants-in-air-particulate-matter
#19
E Beristain-Montiel, R Villalobos-Pietrini, G E Arias-Loaiza, S L Gómez-Arroyo, O Amador-Muñoz
New clean technologies are needed to determine concentration of organic pollutants without generating more pollution. A method to extract Persistent Organic Pollutants (POPs) from airborne particulate matter was developed using a novel technology recently patented called ultrasound assisted extraction micro-scale cell (UAE-MSC). This technology extracts, filters, collects the sample, and evaporates the solvent, on-line. No sample transfer is needed. The cell minimizes sample manipulation, solvent consumption, waste generation, time, and energy; fulfilling most of the analytical green chemistry protocol...
November 23, 2016: Journal of Chromatography. A
https://www.readbyqxmd.com/read/27894695/the-performance-of-atmospheric-pressure-gas-chromatography-tandem-mass-spectrometry-compared-to-gas-chromatography-high-resolution-mass-spectrometry-for-the-analysis-of-polychlorinated-dioxins-and-pcbs-in-food-and-feed-samples
#20
Guillaume Ten Dam, Igor Cabreira Pussente, Georges Scholl, Gauthier Eppe, Alexander Schaechtele, Stefan van Leeuwen
Recently, gas chromatography tandem mass spectrometry (GC-MS/MS) has been added in European Union (EU) legislation as an alternative to magnetic sector high resolution mass spectrometry (HRMS) for the analysis of dioxins and dioxin like polychlorinated biphenyls (dl-PCB) in food and feed. In this study the performance of APGC-MS/MS compared to GC-HRMS is investigated and compared with EU legislation. The study includes the legislative parameters, relative intermediate precision standard deviation (SRw,rel), trueness, sensitivity, linear range and ion ratio tolerance...
November 22, 2016: Journal of Chromatography. A
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