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HLA

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https://www.readbyqxmd.com/read/30226020/two-novel-hla-b-alleles-hla-b-53-01-17-and-b-58-83-found-in-patients-from-guinea-bissau
#1
M Christiansen, C Erikstrup, C Medina, B K Møller, B L Hønge
Novel HLA-B alleles HLA- B*53:01:17 and HLA-B*58:83 are described in two patients from Guinea-Bissau. This article is protected by copyright. All rights reserved.
September 17, 2018: HLA
https://www.readbyqxmd.com/read/30226017/detection-of-an-hla-b-58-variant-hla-b-58-19-by-sequence-based-typing-in-a-taiwanese-individual
#2
K L Yang, P Y Lin
One nucleotide substitution at codon 152 of HLA-B*58:01:01:01 results in a novel allele, HLA-B*58:19. This article is protected by copyright. All rights reserved.
September 17, 2018: HLA
https://www.readbyqxmd.com/read/30225993/identification-of-the-novel-hla-dpa1-01-03-01-12-allele-in-a-saudi-individual
#3
A Alanazi, M Alburaq, A Alblaihed, F AlSebaiheen, A Alshubaili
HLA-DPA1*01:03:01:12 differs from HLA-DPA1*01:03:01:01 by a single nucleotide substitution (G➔C) at position 4239. This article is protected by copyright. All rights reserved.
September 17, 2018: HLA
https://www.readbyqxmd.com/read/30225991/hla-a-b-drb1-dqa1-and-dqb1-profile-in-a-population-from-southern-brazil
#4
Pâmela Guimarães Reis, Eliane Papa Ambrosio-Albuquerque, Raquel Aparecida Fabreti-Oliveira, Ricardo Alberto Moliterno, Victor Hugo de Souza, Ana Maria Sell, Jeane Eliete Laguila Visentainer
The aim of this study was to determine the allele and haplotype frequencies of HLA-A, -B, -DRB1, and -DQB1 in a self-declared White population from the North and Northwestern state of Paraná, Southern Brazil, and compare the data with populations worldwide. The genotyping was performed with a group of 641 individuals, based on PCR-SSO and -SSP methods, and allele and haplotype frequencies were estimated. Comparisons with European, African, Asian, and Amerindian populations were performed. The most frequent allelic groups, alleles and haplotypes were: HLA-A*02, HLA-B*35, HLA-DRB1*07:01, HLA-DQB1*03:01, and HLA-A*01/B*08/DRB1*03:01...
September 17, 2018: HLA
https://www.readbyqxmd.com/read/30225977/the-novel-hla-drb3-02-02-11-allele-identified-in-an-italian-individual
#5
M Battarra, F Locatelli, T Galluccio, A Guagnano, M Andreani
HLA-DRB3*02:02:11 differs from HLA-DRB3*02:02:01:01 by a single synonymous substitution in exon 3' This article is protected by copyright. All rights reserved.
September 17, 2018: HLA
https://www.readbyqxmd.com/read/30221491/the-novel-hla-b-allele-hla-b-50-31-was-identified-by-sequencing-genomic-dna
#6
Kun-Lian Zhang, Xiao-Feng Li, Xu Zhang, Feng-Qiu Lin, Jian-Ping Li
The novel HLA-B allele, HLA-B*50:31, was identified by sequencing genomic DNA This article is protected by copyright. All rights reserved.
September 16, 2018: HLA
https://www.readbyqxmd.com/read/30221486/identification-of-the-novel-hla-a-23-91n-allele-in-a-saudi-individual
#7
H Alanazi, F Aloufi, M Gattan, A Alqasem, A H Hajeer
HLA-A*23:91N differs from HLA-A*23:01:01 by a single nucleotide substitution (G➔A) at position 369. This article is protected by copyright. All rights reserved.
September 16, 2018: HLA
https://www.readbyqxmd.com/read/30203443/malayalam-speaking-population-from-south-india
#8
Vani Seshasubramanian, Nirmal Kumar Manisekar, Aruna Devi Sathishkannan, Chandramouleeswaran Naganathan, Yogesh Nandakumar, Saranya Narayan
A total of 356 (217 bone marrow and 139 cord blood donors) Malayalam Speaking individuals (Keralites or Malayalis (Here not to be confused with Malayali tribes of Eastern ghats from South India)) from Kerala, Tamilnadu, Karnataka and Telangana were typed for HLA-A, -B, -C, -DRB and -DQB alleles. Out of 356 samples, 253 samples were typed by Sanger sequencing using SeCore Sequencing IVD® kit user protocol (Invitrogen) and the results detected on an automated ABI 3730xl DNA analyzer instrument. This article is protected by copyright...
September 10, 2018: HLA
https://www.readbyqxmd.com/read/30187685/identification-of-the-novel-hla-allele-hla-b-40-06-07-by-sequence-based-typing
#9
Jian-Ping Li, Xu Zhang, Feng-Qiu Lin, Kun-Lian Zhang, Xiao-Feng Li
HLA-B*40:06:07 has one synonymous nucleotide change from HLA-B*40:06:01:01 at nucleotide 81 (codon 3 Histidine). This article is protected by copyright. All rights reserved.
September 5, 2018: HLA
https://www.readbyqxmd.com/read/30168290/role-of-donor-hla-class-i-mismatch-kir-ligand-mismatch-and-hla-kir-pairings-in-hematological-malignancy-relapse-after-unrelated-hematopoietic-stem-cell-transplantation
#10
Elzbieta Graczyk-Pol, Marta Rogatko-Koros, Klaudia Nestorowicz, Slawomir Gwozdowicz, Renata Mika-Witkowska, Daria Pawliczak, Marta Zubala, Urszula Szlendak, Agnieszka Witkowska, Agnieszka Tomaszewska, Barbara Nasilowska-Adamska, Andrzej Szczepinski, Michal Wojcik, Kazimierz Halaburda, Jacek Nowak
HLA are functional in cancer immunosurveillance in adaptive and innate immunity pathways. In unrelated hematopoietic stem cell transplantation (HSCT) in 688 patients with hematological malignancies we compared anti-tumor efficacy of transplant in three models including the level of: i) donor-recipient HLA class I mismatch, ii) KIR-ligand mismatch, iii) post-transplant cognate HLA:KIR pairing. The effects were directly compared in multivariate models with backward elimination including all three effects in initial model...
August 31, 2018: HLA
https://www.readbyqxmd.com/read/30168284/efficacy-and-safety-of-bortezomib-treatment-for-refractory-acute-antibody-mediated-rejection-a-pilot-study
#11
Janka Slatinska, Antonij Slavcev, Eva Honsova, Petra Hruba, Iva Kratochvilova, Tomas Rohal, Ondrej Viklicky
A novel therapeutic approach to refractory acute antibody-mediated rejection (AMR) in kidney transplant recipients was applied in 23 patients based on administration of Bortezomib, intravenous corticosteroids, plasmapheresis and Rituximab. Application of Bortezomib regimen led to diminishing of donor-specific antibodies (DSA) to HLA-B (p=0.004) and HLA-DR (p=0.0005), but not to HLA-A (p=0.106) and HLA-DQ antigens (p=0.18). Patients with good clinical response to treatment had significantly better allograft survival than recipients with continuing deterioration of graft function (p=0...
August 31, 2018: HLA
https://www.readbyqxmd.com/read/30156062/a-novel-hla-a-null-allele-hla-a-30-130n-discovered-by-amplicon-based-next-generation-sequencing
#12
Vera Balz, Johannes Fischer, Stefan Krause, Juergen Enczmann
A novel HLA-A allele, HLA-A*30:130N, carrying a two-nucleotide insertion in exon 4 is described. This article is protected by copyright. All rights reserved.
August 28, 2018: HLA
https://www.readbyqxmd.com/read/30156043/a-novel-hla-b-variant-hla-b-14-02-16-discovered-by-amplicon-based-next-generation-sequencing
#13
Vera Balz, Johannes Fischer, Stefan Krause, Juergen Enczmann
HLA-B*14:02:16 differs from B*14:02:01:01 by a synonymous nucleotide substitution in codon 141. This article is protected by copyright. All rights reserved.
August 28, 2018: HLA
https://www.readbyqxmd.com/read/30129271/improvement-in-hla-typing-by-new-sequence-specific-oligonucleotides-kits-for-hla-a-b-and-drb1-loci
#14
Charlène Bouthemy, Mamy Ralazamahaleo, Isabelle Jollet, Matthieu Filloux, Jonathan Visentin, Gwendaline Guidicelli
PCR-SSO (sequence-specific oligonucleotide) is commonly used for HLA-typing. We replaced our LabType® SSO HD (HD) kits with LabType® SSO XR (XR) kits (OneLambda, Inc.) for HLA-A, -B and -DRB1 following acquisition of a LABScan3DTM analyzer. The XR kits have more bead regions than the HD kits, allowing for an extended number of probes and exon coverage. They are claimed to improve typing resolution and to diminish the number of allele ambiguities, including common and well-documented (CWD) and null alleles to be resolved...
August 20, 2018: HLA
https://www.readbyqxmd.com/read/30129247/multiplex-rq-pcr-assay-for-rapid-and-sensitive-detection-of-hematopoietic-chimerism
#15
Sylvie Nadvornikova, Monika Leontovycova, Kristyna Pegova, Pavla Hrabakova, Renata Prerovska, Hana Cechova
The increase of mixed chimerism (MC) after allogeneic hematopoietic stem cell transplantation has been associated with a high risk of relapse. A variety of techniques that employ polymorphic markers have been established to survey hematopoietic chimerism status. The highest sensitivity is achieved by using Real-Time Quantitative Polymerase Chain Reaction (RQ-PCR) analysis of insertion/deletion polymorphism, which allows the detection of disease recurrence and subsequently the earlier initiation of therapeutic intervention...
August 20, 2018: HLA
https://www.readbyqxmd.com/read/30123963/identification-of-the-novel-hla-a-29-113-allele-in-a-hodgkin-s-lymphoma-patient
#16
Li Pan, Wenqiang Tang, Anqi Zhang, Bo Fu, Wei Liu
HLA-A*29:113 allele differs from HLA-A*29:01:01 at position 517 within exon 3.
August 19, 2018: HLA
https://www.readbyqxmd.com/read/30117314/full-gene-hla-class-i-sequences-of-79-novel-and-519-mostly-uncommon-alleles-from-a-large-united-states-registry-population
#17
Ana Lazaro, Lihua Hou, Bin Tu, Carly Masaberg, Elizabeth Enriquez, Jennifer Gerfen, Kanthi Kariyawasam, Misti Persaud, Xihan Qin, Dannah Simbulan, Yi Xiao, Lisa Xun, Ruyan Yang, Jennifer Ng, Carolyn Katovich Hurley
HLA class I assignments were obtained at single genotype, G level resolution from 98,855 volunteers for an unrelated donor registry in the United States. In spite of the diverse ancestry of the volunteers, over 99% of the assignments at each locus are common. Within this population, 52 novel alleles differing in exons 2 and 3 are identified and characterized. Previously reported alleles with incomplete sequences in the IPD-IMGT/HLA database (n=519) were selected for full gene sequencing and, from this sampling, another 27 novel alleles are described...
August 17, 2018: HLA
https://www.readbyqxmd.com/read/30117303/common-and-well-documented-hla-alleles-of-german-stem-cell-donors-by-haplotype-frequency-estimation
#18
Hans-Peter Eberhard, Alexander H Schmidt, Joannis Mytilineos, Katharina Fleischhauer, Carlheinz Müller
We present a catalogue of common and well-documented (CWD) alleles of the German population for the six HLA loci A, B, C, DRB1, DQB1 and DPB1. This study is based on a sample of over 5 million volunteer adult hematopoietic stem cell donors from the 26 German donor centres. To establish the catalogue, allele and haplotype frequencies were estimated with a validated implementation of the Expectation-Maximization algorithm. CWD criteria similar to existing CWD catalogues were applied in order to be able to put our findings into the context of relevant existing references...
August 17, 2018: HLA
https://www.readbyqxmd.com/read/30117316/the-new-allele-hla-drb1-14-54-01-04-in-a-chinese-family-identified-using-next-generation-sequencing
#19
Dan Peng, Haixia Li, Zhiyuan Wang, Riga Wu, Hongyu Sun
DRB1*14:54:01:04 has 5 nucleotide differences from DRB1*14:54:01:01 at 10,544 (G>A) and 9068 (TGAG insertion). This article is protected by copyright. All rights reserved.
August 16, 2018: HLA
https://www.readbyqxmd.com/read/30117311/the-hla-c-03-272-allele-identified-in-a-volunteer-donor-for-hematopoietic-stem-cell-transplant
#20
In-Cheol Baek, Eun-Jeong Choi, Dong-Hwan Shin, Hyoung-Jae Kim, Tai-Gyu Kim
HLA-C*03:272 differs from HLA-C*03:03:01:01 in exon 3, codon 163. This article is protected by copyright. All rights reserved.
August 16, 2018: HLA
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