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M-R Huo, Y Yu, B Xi, D Li
HLA-C*12:221 differs from C*12:02:03 by a single nucleotide substitution at position 367 of exon 3.
January 20, 2018: HLA
J W Zheng, Y Sun, J H Xie, D Xiang
The HLA-B*40:01:31 allele differs from B*40:01:01 by one nucleotide substitution at position 216 .
January 17, 2018: HLA
C Horecky, E Horecka, J Futas, E Janova, P Horin, A Knoll
Genotyping microsatellite markers represents a standard, relatively easy and inexpensive method of assessing genetic diversity of complex genomic regions in various animal species, such as the major histocompatibility complex (MHC) and/or natural killer cell receptor (NKR) genes. MHC-linked microsatellite markers have been identified and some of them were used for characterizing MHC polymorphism in various species, including horses. However, most of those were MHC class II markers, while MHC class I and III sub-regions were less well covered...
January 17, 2018: HLA
C K Hurley, L Hou, A Lazaro, J Gerfen, E Enriquez, P Galarza, M Belen Rodriguez Cardozo, M Halagan, M Maiers, D Behm, J Ng
Next generation DNA sequencing is used to determine the HLA-A, -B, -C, -DRB1, and -DQB1 assignments of 1472 unrelated volunteers for the unrelated donor registry in Argentina. The analysis characterized all HLA exons and introns for class I alleles; at least exons 2, 3 for HLA-DRB1; and exons 2-6 for HLA-DQB1. Of the distinct alleles present, there are 330 class I and 98 class II. The majority (~98%) of the cumulative allele frequency at each locus is contributed by alleles that appear at a frequency of at least 1 in 1000...
January 12, 2018: HLA
Z Li, H-Y Zou
Confirmed the full-length sequence of HLA-C*03:02:01 by cloning and sequencing in a Chinese donor.
January 11, 2018: HLA
Vera Balz, Stefan Krause, Johannes Fischer, Jürgen Enczmann
High throughput analysis using amplicon-based next-generation sequencing (NGS) of HLA class I genes in samples of registered stem cell donors of the German Stem Cell Donor Registry Düsseldorf revealed 151 novel variants. In addition, 4 new variants were identified in well-defined samples obtained from the UCLA International Cell Exchange program. New alleles included 37 HLA-A, 57 HLA-B, and 61 HLA-C variant alleles. All variants were confirmed by NGS of HLA-A, HLA-B, and HLA-C genes including the respective 5´ and 3´ untranslated regions as well as Sanger sequence analysis...
January 8, 2018: HLA
Z Li, H-Y Zou, D Zhou
Confirmed the full-length sequence of HLA- C*15:13:01:01 by cloning and sequencing in a Chinese donor.
January 8, 2018: HLA
S-Q Cai, R Chen, Z-H Deng
The novel 2DL4*040 allele differs from the closest allele 2DL4*00102 by a missense mutation.
January 5, 2018: HLA
R A Fabreti-Oliveira, T R Turner, M F Lasmar, E Nascimento
Novel allele, HLA-B*14:56 generated by a gene conversion event was identified in a Brazilian individual.
January 5, 2018: HLA
J E L Visentainer, T R Turner, E Nascimento, R L S Maior, R A Fabreti-Oliveira
Novel allele, HLA-B*51:220 generated by a gene conversion event was identified in a Brazilian individual.
January 5, 2018: HLA
Z-H Deng, S-Q Cai, R Chen
The novel KIR2DL4*039 allele differs from the closest allele 2DL4*00602 by a single nonsynonymous mutation.
January 2, 2018: HLA
S-X Zhao, F Wang, L-N Dong, J He, F-M Zhu
HLA-C*07:530 differs from HLA-C*07:02:01 by a single nucleotide at position 363 G>C.
January 2, 2018: HLA
B Valatkaite-Rakstiene, R Cekauskiene, L Griskevicius, A Jakubauskas
Amino acid substitution Val165Leu of the HLA-A*03:01:01 results in a novel allele, HLA-A*03:289.
January 2, 2018: HLA
J He, L-N Dong, F Wang, W Wang, F-M Zhu
HLA-B*40:338N differs from HLA-B*40:01:01 by a single nucleotide substitution at position 843 C>A.
January 2, 2018: HLA
V Kalotra, M Lall, I C Verma, A Kaur, A Kaur
Human leucocyte antigen-G (HLA-G), a non classical class Ib gene is mainly expressed on extravillous trophoblasts at the fetal-maternal interface. HLA-G molecule is considered to play an important role in maternal immune suppression during pregnancy. 14bp insertion/deletion polymorphism (rs66554220) in exon 8 of the HLA-G gene influences HLA-G mRNA stability and isoform splicing patterns. In the present study, 202 RM women with two or more than two consecutive miscarriages, their 202 partners and 204 fertile control women with at least one live birth and no miscarriages were analyzed for 14bp insertion/deletion polymorphism...
December 27, 2017: HLA
T Goeury, L E Creary, M A Fernandez-Vina, J-M Tiercy, J M Nunes, A Sanchez-Mazas
A total of 72 unrelated Mandenka individuals from Eastern Senegal, Niokholo region, were typed using Next Generation Sequencing (library preparation with the Holotype HLA X2 and MIA FORA NGS HLA Typing kits, sequencing with Illumina MiSeq, and bio-informatic processing with HLA Twin v1.1.1 (Omixon) and MIA FORA NGS software) and yielded reliable genotypes for 8 HLA loci, namely A, B, C, DRB1, DQA1, DQB1, DPA1 and DPB1.
December 27, 2017: HLA
J W Zheng, W Shen, Y Sun, J H Xie, D Xiang
The HLA-B*40:241 allele differs from B*40:01:01 by one nucleotide substitution at position 691 .
December 26, 2017: HLA
A Balas, R Alenda, R López-Hernández, F Sánchez-García, J L Vicario
Two novel HLA-B alleles, B*07:299 and B*35:350, were characterized by genomic full-length sequencing.
December 26, 2017: HLA
N-Y Chen, S-X Zhao, L-N Dong, J Xu, F-M Zhu
HLA-B*13:98 differs from HLA-B*13:02:01 by a single nucleotide substitution at position 193 A > G.
December 15, 2017: HLA
M-J Apithy, J Desoutter, N Guillaume
In clinical organ transplantation, flow cytometry crossmatching can be performed on total blood with a hemolysis step or after a preliminary mononuclear cell separation step using a standard Ficoll-Hypaque protocol. Here, we compared the Ficoll-Hypaque step with a faster technique for isolating mononuclear cells (the SepMateTM tube), using the same samples (collected and stored at room temperature for 0, 24, 48 or 72 hours). We found that the SepMateTM separation protocol is easily applied to flow cytometry crossmatching (with or without pronase treatment), provided that the samples have been stored at room temperature for 48 hours or less...
December 14, 2017: HLA
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