journal
https://read.qxmd.com/read/34307768/twenty-four-hour-ex-vivo-normothermic-machine-perfusion-in-rat-livers
#1
JOURNAL ARTICLE
Omar Haque, Casie A Pendexter, Stephanie E J Cronin, Siavash Raigani, Reiner J de Vries, Heidi Yeh, James F Markmann, Korkut Uygun
Ex-vivo liver perfusion (EVLP) is an ideal platform to study liver disease, therapeutic interventions, and pharmacokinetic properties of drugs without any patient risk. Rat livers are an ideal model for EVLP due to less organ quality variability, ease of hepatectomy, well-defined molecular pathways, and relatively low costs compared to large animal or human perfusions. However, the major limitation with rat liver normothermic machine perfusion (NMP) is maintaining physiologic liver function on an ex-vivo machine perfusion system...
2020: Technology
https://read.qxmd.com/read/32292800/first-in-human-evaluation-of-a-hand-held-automated-venipuncture-device-for-rapid-venous-blood-draws
#2
JOURNAL ARTICLE
Josh M Leipheimer, Max L Balter, Alvin I Chen, Enrique J Pantin, Alexander E Davidovich, Kristen S Labazzo, Martin L Yarmush
Obtaining venous access for blood sampling or intravenous (IV) fluid delivery is an essential first step in patient care. However, success rates rely heavily on clinician experience and patient physiology. Difficulties in obtaining venous access result in missed sticks and injury to patients, and typically require alternative access pathways and additional personnel that lengthen procedure times, thereby creating unnecessary costs to healthcare facilities. Here, we present the first-in-human assessment of an automated robotic venipuncture device designed to safely perform blood draws on peripheral forearm veins...
September 2019: Technology
https://read.qxmd.com/read/32211456/a-protein-interaction-free-energy-model-based-on-amino-acid-residue-contributions-assessment-of-point-mutation-stability-of-t4-lysozyme
#3
JOURNAL ARTICLE
Lawrence J Williams, Brian J Schendt, Zachary R Fritz, Yonatan Attali, Robert H Lavroff, Martin L Yarmush
Here we present a model to estimate the interaction free energy contribution of each amino acid residue of a given protein. Protein interaction energy is described in terms of per-residue interaction factors, μ. Multibody interactions are implicitly captured in μ through the combination of amino acid terms (γ) guided by local conformation indices (σ). The model enables construction of an interaction factor heat map for a protein in a given fold, allows prima facie assessment of the degree of residue-residue interaction, and facilitates a qualitative and quantitative evaluation of protein association properties...
March 2019: Technology
https://read.qxmd.com/read/31414037/exploring-donor-demographics-effects-on-hepatocyte-yield-and-viability-results-of-whole-human-liver-isolation-from-one-center
#4
JOURNAL ARTICLE
Sharon Geerts, Sinan Ozer, Chris Chu, Bryan C Fuchs, Kenneth K Tanabe, Heidi Yeh, Korkut Uygun
Due to the growth of cell-based therapeutic alternatives addressing the shortage of livers for transplant, there is necessity for a reliable source of human hepatocytes. In addition, pharmaceutical research often requires human hepatocytes to assess new drug therapies during development or to achieve FDA approval. Whole human livers producing large quantities of cells from the same donor are ideal, enhancing reproducibility for all purposes, while also allowing for capturing variances in drug-metabolism across different demographics for pharmaceutical testing and development but are limited in availability and quality for research purposes...
March 2019: Technology
https://read.qxmd.com/read/31388515/repopulation-of-intrahepatic-bile-ducts-in-engineered-rat-liver-grafts
#5
JOURNAL ARTICLE
Yibin Chen, Julie Devalliere, Beyza Bulutoglu, Martin L Yarmush, Basak E Uygun
Engineered liver grafts for transplantation with sufficient hepatic function have been developed both in small and large animal models using the whole liver engineering approach. However, repopulation of the bile ducts in the whole liver scaffolds has not been addressed yet. In this study, we show the feasibility of repopulating the bile ducts in decellularized rat livers. Biliary epithelial cells were introduced into the bile ducts of the decellularized liver scaffolds with or without hepatocytes in the parenchymal space...
March 2019: Technology
https://read.qxmd.com/read/38486857/macrophage-modulation-by-polymerized-hemoglobins-potential-as-a-wound-healing-therapy
#6
JOURNAL ARTICLE
Paulina Krzyszczyk, Kishan Patel, Yixin Meng, Maurice O'Reggio, Kristopher Richardson, Alison Acevedo, Ioannis P Androulakis, Martin L Yarmush, Rene S Schloss, Andre F Palmer, Franҫois Berthiaume
Chronic skin wounds are hypoxic and are stalled in a pro-inflammatory state. Hemoglobin (Hb)-based oxygen carriers have shown potential in increasing oxygen delivery to aid wound healing. Macrophages also take up Hb, thus altering their phenotype and the regulation of inflammation. Herein, we compared the effect of Hb and polymerized Hbs (PolyHbs) on the phenotype of human macrophages. Macrophages were incubated with Hb or different forms of PolyHbs, and the inflammatory secretion profile was analyzed. PolyHbs were produced by polymerizing Hb in the relaxed (R) or tense (T) quaternary state and by varying the molar ratio of the glutaraldehyde crosslinking agent to Hb...
2019: Technology
https://read.qxmd.com/read/30713991/the-growing-role-of-precision-and-personalized-medicine-for-cancer-treatment
#7
JOURNAL ARTICLE
Paulina Krzyszczyk, Alison Acevedo, Erika J Davidoff, Lauren M Timmins, Ileana Marrero-Berrios, Misaal Patel, Corina White, Christopher Lowe, Joseph J Sherba, Clara Hartmanshenn, Kate M O'Neill, Max L Balter, Zachary R Fritz, Ioannis P Androulakis, Rene S Schloss, Martin L Yarmush
Cancer is a devastating disease that takes the lives of hundreds of thousands of people every year. Due to disease heterogeneity, standard treatments, such as chemotherapy or radiation, are effective in only a subset of the patient population. Tumors can have different underlying genetic causes and may express different proteins in one patient versus another. This inherent variability of cancer lends itself to the growing field of precision and personalized medicine (PPM). There are many ongoing efforts to acquire PPM data in order to characterize molecular differences between tumors...
September 2018: Technology
https://read.qxmd.com/read/30519598/tri-culture-system-for-pro-hapten-sensitizer-identification-and-potency-classification
#8
JOURNAL ARTICLE
Serom Lee, Talia Greenstein, Lingting Shi, Tim Maguire, Rene Schloss, Martin Yarmush
Allergic contact dermatitis (ACD) is an inflammatory disease that impacts 15-20% of the general population and accurate screening methods for chemical risk assessment are needed. However, most approaches poorly predict pre- and pro-hapten sensitizers, which require abiotic or metabolic conversion prior to inducing sensitization. We developed a tri-culture system comprised of MUTZ-3-derived Langerhans cells, HaCaT keratinocytes, and primary dermal fibroblasts to mimic the cellular and metabolic environments of skin sensitization...
June 2018: Technology
https://read.qxmd.com/read/30057935/automated-end-to-end-blood-testing-at-the-point-of-care-integration-of-robotic-phlebotomy-with-downstream-sample-processing
#9
JOURNAL ARTICLE
M L Balter, J M Leipheimer, A I Chen, A Shrirao, T J Maguire, M L Yarmush
Diagnostic blood testing is the most commonly performed clinical procedure in the world, and influences the majority of medical decisions made in hospital and laboratory settings. However, manual blood draw success rates are dependent on clinician skill and patient physiology, and results are generated almost exclusively in centralized labs from large-volume samples using labor-intensive analytical techniques. This paper presents a medical device that enables end-to-end blood testing by performing blood draws and providing diagnostic results in a fully automated fashion at the point-of-care...
June 2018: Technology
https://read.qxmd.com/read/29682599/microfluidic-flow-cytometry-the-role-of-microfabrication-methodologies-performance-and-functional-specification
#10
JOURNAL ARTICLE
Anil B Shrirao, Zachary Fritz, Eric M Novik, Gabriel M Yarmush, Rene S Schloss, Jeffrey D Zahn, Martin L Yarmush
Flow cytometry is an invaluable tool utilized in modern biomedical research and clinical applications requiring high throughput, high resolution particle analysis for cytometric characterization and/or sorting of cells and particles as well as for analyzing results from immunocytometric assays. In recent years, research has focused on developing microfluidic flow cytometers with the motivation of creating smaller, less expensive, simpler, and more autonomous alternatives to conventional flow cytometers. These devices could ideally be highly portable, easy to operate without extensive user training, and utilized for research purposes and/or point-of-care diagnostics especially in limited resource facilities or locations requiring on-site analyses...
March 2018: Technology
https://read.qxmd.com/read/31548979/real-time-measurement-of-cholesterol-secreted-by-human-hepatocytes-using-a-novel-microfluidic-assay
#11
JOURNAL ARTICLE
Sonali Karnik, Chaeeun Lee, Andrea Cancino, Abhinav Bhushan
The use of microfluidics has become widespread in recent years because of the use of lesser resources such as small size, low volume of reagents, and physiological representation of mammalian cells. One of the advantages of microfluidic-based cell culture is the ability to perfuse culture media which tends to improve cellular health and function. Although measurement of cellular function conventionally is carried out using well-plates and plate readers, these approaches are insufficient to carry out in-line analysis of perfused cell cultures because of mismatch between volumes and sensitivity...
2018: Technology
https://read.qxmd.com/read/31106253/a-novel-model-for-ex-situ-reperfusion-of-the-human-liver-following-subnormothermic-machine-perfusion
#12
JOURNAL ARTICLE
James H Avruch, Bote G Bruinsma, Pepijn D Weeder, Gautham V Sridharan, Robert J Porte, Heidi Yeh, James F Markmann, Korkut Uygun
Machine perfusion-based organ preservation techniques are prudently transitioning into clinical practice. Although experimental data is compelling, the outcomes in the highly variable clinical donation-transplantation setting are unpredictable. Here, we offer an intermediate tool for pre-clinical assessment of human donor livers. We present a model for ex situ reperfusion of discarded human livers and report on its application in three human livers that have undergone subnormothermic (21°C) machine perfusion as an experimental preservation method...
December 2017: Technology
https://read.qxmd.com/read/29744376/cell-sized-lipid-vesicles-for-cell-cell-synaptic-therapies
#13
JOURNAL ARTICLE
D Vallejo, S H Lee, D Lee, C Zhang, C Rapier, S D Chessler, A P Lee
Cell-sized lipid vesicles (CLVs) have shown great promise for therapeutic and artificial cell applications, but their fragility and short shelf life has hindered widespread adoption and commercial viability. We present a method to circumvent the storage limitations of CLVs such as giant unilamellar vesicles (GUVs) and single-compartment multisomes (SCMs) by storing them in a double emulsion precursor form. The double emulsions can be stored for at least 8 months and readily converted into either GUVs or SCMs at any time...
December 2017: Technology
https://read.qxmd.com/read/29541655/a-thermoreversible-photocrosslinkable-collagen-bio-ink-for-free-form-fabrication-of-scaffolds-for-regenerative-medicine
#14
JOURNAL ARTICLE
Kathryn E Drzewiecki, Juilee N Malavade, Ijaz Ahmed, Christopher J Lowe, David I Shreiber
As a biomaterial, collagen has been used throughout tissue engineering and regenerative medicine. Collagen is native to the body, is highly biocompatible, and naturally promotes cell adhesion and regeneration. However, collagen fibers and the inherent weak mechanical properties of collagen hydrogels interfere with further development of collagen as a bio-ink. Herein, we demonstrate the use of a modified type-I collagen, collagen methacrylamide (CMA), as a fibril-forming bio-ink for free-form fabrication of scaffolds...
December 2017: Technology
https://read.qxmd.com/read/29780857/multi-omic-network-based-interrogation-of-rat-liver-metabolism-following-gastric-bypass-surgery-featuring-swath-proteomics
#15
JOURNAL ARTICLE
Gautham Vivek Sridharan, Matthew D'Alessandro, Shyam Sundhar Bale, Vicky Bhagat, Hugo Gagnon, John M Asara, Korkut Uygun, Martin L Yarmush, Nima Saeidi
Morbidly obese patients often elect for Roux-en-Y gastric bypass (RYGB), a form of bariatric surgery that triggers a remarkable 30% reduction in excess body weight and reversal of insulin resistance for those who are type II diabetic. A more complete understanding of the underlying molecular mechanisms that drive the complex metabolic reprogramming post-RYGB could lead to innovative non-invasive therapeutics that mimic the beneficial effects of the surgery, namely weight loss, achievement of glycemic control, or reversal of non-alcoholic steatohepatitis (NASH)...
September 2017: Technology
https://read.qxmd.com/read/29552603/hypoxia-impairs-mesenchymal-stromal-cell-induced-macrophage-m1-to-m2-transition
#16
JOURNAL ARTICLE
Renea A Faulknor, Melissa A Olekson, Emmanuel C Ekwueme, Paulina Krzyszczyk, Joseph W Freeman, François Berthiaume
The transition of macrophages from the pro-inflammatory M1 to the anti-inflammatory M2 phenotype is crucial for the progression of normal wound healing. Persistent M1 macrophages within the injury site may lead to an uncontrolled macrophage-mediated inflammatory response and ultimately a failure of the wound healing cascade, leading to chronic wounds. Mesenchymal stromal cells (MSCs) have been widely reported to promote M1 to M2 macrophage transition; however, it is unclear whether MSCs can drive this transition in the hypoxic environment typically observed in chronic wounds...
June 2017: Technology
https://read.qxmd.com/read/28804751/ultrasound-imaging-and-segmentation-of-bone-surfaces-a-review
#17
JOURNAL ARTICLE
Ilker Hacihaliloglu
Due to its real-time, non-radiation based three-dimensional (3D) imaging capabilities, ultrasound (US) has been incorporated into various orthopedic procedures. However, imaging artifacts, low signal-to-noise ratio (SNR) and bone boundaries appearing several mm in thickness make the analysis of US data difficult. This paper provides a review about the state-of-the-art bone segmentation and enhancement methods developed for two-dimensional (2D) and 3D US data. First, an overview for the appearance of bone surface response in B-mode data is presented...
June 2017: Technology
https://read.qxmd.com/read/28781994/rapid-antibiotic-sensitivity-testing-in-microwell-arrays
#18
JOURNAL ARTICLE
Fatemeh Jalali, Felix Ellett, Daniel Irimia
The widespread bacterial resistance to a broad range of antibiotics necessitates rapid antibiotic susceptibility testing before effective treatment could start in the clinic. Among resistant bacteria, Staphylococcus aureus is one of the most important, and Methicillin-resistant (MRSA) strains are a common cause of life threatening infections. However, standard susceptibility testing for S. aureus is time consuming and thus the start of effective antibiotic treatment is often delayed. To circumvent the limitations of current susceptibility testing systems, we designed an assay that enables measurements of bacterial growth with higher spatial and temporal resolution than standard techniques...
June 2017: Technology
https://read.qxmd.com/read/28781993/%C3%AE-neurocircuitry-establishing-in-vitro-models-of-neurocircuits-with-human-neurons
#19
JOURNAL ARTICLE
Joseph A Fantuzzo, Lidia De Filippis, Heather McGowan, Nan Yang, Yi-Han Ng, Apoorva Halikere, Jing-Jing Liu, Ronald P Hart, Marius Wernig, Jefrey D Zahn, Zhiping P Pang
Neurocircuits in the human brain govern complex behavior and involve connections from many different neuronal subtypes from different brain regions. Recent advances in stem cell biology have enabled the derivation of patient-specific human neuronal cells of various subtypes for the study of neuronal function and disease pathology. Nevertheless, one persistent challenge using these human-derived neurons is the ability to reconstruct models of human brain circuitry. To overcome this obstacle, we have developed a compartmentalized microfluidic device, which allows for spatial separation of cell bodies of different human-derived neuronal subtypes (excitatory, inhibitory and dopaminergic) but is permissive to the spreading of projecting processes...
June 2017: Technology
https://read.qxmd.com/read/28713851/building-an-experimental-model-of-the-human-body-with-non-physiological-parameters
#20
JOURNAL ARTICLE
Joseph M Labuz, Christopher Moraes, David R Mertz, Brendan M Leung, Shuichi Takayama
New advances in engineering and biomedical technology have enabled recent efforts to capture essential aspects of human physiology in microscale, in-vitro systems. The application of these advances to experimentally model complex processes in an integrated platform - commonly called a 'human-on-a-chip (HOC)' - requires that relevant compartments and parameters be sized correctly relative to each other and to the system as a whole. Empirical observation, theoretical treatments of resource distribution systems and natural experiments can all be used to inform rational design of such a system, but technical and fundamental challenges (e...
March 2017: Technology
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