journal
MENU ▼
Read by QxMD icon Read
search

Genome Announcements

journal
https://www.readbyqxmd.com/read/28428317/complete-nucleotide-sequence-of-an-isolate-of-grapevine-satellite-virus-and-evidence-for-the-presence-of-multimeric-forms-in-an-infected-grapevine
#1
T Candresse, A Marais, S Theil, C Faure, T Lacombe, J M Boursiquot
The complete nucleotide sequence of an isolate of grapevine satellite virus (GV-Sat) was determined by next-generation sequencing (NGS) and compared with the single available complete sequence. The NGS data unexpectedly provided evidence for the existence of multimeric forms of GV-Sat, which were experimentally confirmed, allowing the redefinition of GV-Sat genomic ends.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428316/genome-sequences-of-cluster-k-mycobacteriophages-drhayes-urkel-and-samuellplaqson
#2
Kirk R Anders, Alex M Murphy, William F Ettinger, Douglas Kempthorne, Charles Kittridge, Alex Kures, Sarah Lundgren, Jacob Masters, Rachel Noyes, Christina Winters, Perry Yazzolino, Kasandra Ziebert, Joseph Haydock, Stephen Hayes, Rebecca A Garlena, Daniel A Russell, Marianne K Poxleitner, Ann-Scott H Ettinger
Mycobacteriophages DrHayes, Urkel, and SamuelLPlaqson were isolated from soil samples in Spokane, WA, using Mycobacterium smegmatis mc(2)155 grown at room temperature. The three genomes differ by only a few nucleotides, are 60,526 bp long, have 97 predicted protein-coding genes and one tRNA gene, and are members of subcluster K1.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428315/improved-high-quality-draft-genome-sequence-and-annotation-of-burkholderia-contaminans-lmg-23361-t
#3
Ji Young Jung, Youngbeom Ahn, Ohgew Kweon, John J LiPuma, David Hussong, Bernard S Marasa, Carl E Cerniglia
Burkholderia contaminans LMG 23361 is the type strain of the species isolated from the milk of a dairy sheep with mastitis. Some pharmaceutical products contain disinfectants such as benzalkonium chloride (BZK) and previously we reported that B. contaminans LMG 23361(T) possesses the ability to inactivate BZK with high biodegradation rates. Here, we report an improved high-quality draft genome sequence of this strain.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428314/complete-genome-sequence-of-the-original-escherichia-coli-isolate-strain-nctc86
#4
Varnica Khetrapal, Kurosh S Mehershahi, Swaine L Chen
Escherichia coli is the most well-studied bacterium and a common colonizer of the lower mammalian gastrointestinal tract. We report here the complete genome sequence of the original Escherichia coli isolate, strain NCTC86, which was described by Theodor Escherich, for whom the genus is named.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428313/draft-genome-sequences-of-two-hydrogenogenic-carboxydotrophic-bacteria-carboxydocella-sp-strains-jdf658-and-ulo1-isolated-from-two-distinct-volcanic-fronts-in-japan
#5
Yuto Fukuyama, Tatsuki Oguro, Kimiho Omae, Yasuko Yoneda, Takashi Yoshida, Yoshihiko Sako
Hydrogenogenic carboxydotrophs may provide hydrogen as primary energy for the microbial community via carbon monoxide oxidation. To investigate the genetics of carbon monoxide metabolism, we report here the draft genome sequences of the hydrogenogenic carboxydotrophs Carboxydocella sp. strains JDF658 (2.60 Mbp; G+C content, 49.2%) and ULO1 (2.70 Mbp; G+C content, 48.8%).
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428312/draft-genome-sequence-of-a-chromium-reducing-strain-pseudomonas-fluorescens-s613-isolated-from-a-chromium-contaminated-aquifer-in-los-alamos-new-mexico
#6
Dongping Wang, Hakim Boukhalfa, Doug S Ware, Hajnalka E Daligault
In this report, a chromium-reducing bacterium, Pseudomonas fluorescens strain S613, was isolated from a Cr(VI)-contaminated aquifer at Los Alamos, NM, and sequenced. The size of the draft genome sequence is approximately 6.7 Mb.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428311/complete-genome-characterization-of-chinese-porcine-deltacoronavirus-strain-chn-tianjin-2016
#7
Feng Zhao, Ying Sun, Bingxu Qian, Xiaorong Zhang, Yantao Wu
As we all know, porcine deltacoronavirus was first detected in Hong Kong, China. Here, we report the complete genome sequence of the Chinese porcine deltacoronavirus strain CHN/Tianjin/2016, which was collected and amplified from clinical fecal samples in March of 2016.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428310/complete-genome-sequence-of-pseudomonas-protegens-h78-a-plant-growth-promoting-rhizobacterium
#8
Xianqing Huang, Zheng Wang, Yujie Liu, Xuehong Zhang
The plant growth-promoting rhizobacterium Pseudomonas protegens H78, which was isolated from the rhizosphere of oilseed rape in Shanghai, can produce a large array of antibiotics with a broad spectrum of activities. Here, we report the annotated complete genome sequence of P. protegens H78.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428309/draft-genome-sequences-of-two-highly-erythromycin-resistant-streptococcus-gallolyticus-subsp-gallolyticus-isolates-containing-a-novel-tn916-like-element-tn6331
#9
Stanimir Kambarev, Frédéric Pecorari, Stéphane Corvec
Recently, we reported the draft genome sequence of Streptococcus gallolyticus NTS31106099. It was found to contain a previously unknown putative Tn916-like conjugative transposon, Tn6263 Here, we report the draft genome sequences of two other clinical isolates, NTS31301958 and NTS31307655. Both of them contain another novel element, Tn6331, which is highly similar to Tn6263.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428308/genome-sequence-of-canine-adenovirus-type-1-isolated-from-a-wolf-canis%C3%A2-lupus-in-southern-italy
#10
Federica Pizzurro, Maurilia Marcacci, Guendalina Zaccaria, Massimiliano Orsini, Francesca Cito, Alfonso Rosamilia, Ludovica Di Renzo, Daniela Malatesta, Daria Di Sabatino, Alessio Lorusso
Canine adenovirus type 1 (CAdV-1), a DNA virus of the family Adenoviridae, causes infectious canine hepatitis, a highly contagious disease primarily affecting canids. In this report, we describe the isolation and whole-genome sequence of a CAdV-1 isolate from the liver of a free-ranging wolf (Canis lupus).
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428307/draft-genome-sequences-of-three-listeria-monocytogenes-isolates-from-foods-in-china
#11
Xudong Su, Guojie Cao, Dai Kuang, Jianmin Zhang, Yi Chen, Marc Allard, Eric Brown, Xianming Shi, Jianghong Meng, Xuebin Xu
Listeria monocytogenes is a foodborne pathogen of global concern because of the high mortality rate among patients. The draft genome sequences of three L. monocytogenes strains isolated from foods are reported here. The availability of these genomes should provide useful information on the genomic diversity of L. monocytogenes isolated from foods in China.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428306/draft-nuclear-genome-sequence-of-the-liquid-hydrocarbon-accumulating-green-microalga-botryococcus-braunii-race-b-showa
#12
Daniel R Browne, Jerry Jenkins, Jeremy Schmutz, Shengqiang Shu, Kerrie Barry, Jane Grimwood, Jennifer Chiniquy, Aditi Sharma, Thomas D Niehaus, Taylor L Weiss, Andrew T Koppisch, David T Fox, Suraj Dhungana, Shigeru Okada, Joe Chappell, Timothy P Devarenne
Botryococcus braunii has long been known as a prodigious producer of liquid hydrocarbon oils that can be converted into combustion engine fuels. This draft genome for the B race of B. braunii will allow researchers to unravel important hydrocarbon biosynthetic pathways and identify possible regulatory networks controlling this unusual metabolism.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428305/draft-genome-sequence-of-the-plasmid-free-lactococcus-lactis-subsp-lactis-strain-lmg-19460
#13
Inês N Silva, Sofia Duarte, Leonilde M Moreira, Gabriel A Monteiro
We report here the draft genome sequence of the plasmid-free Lactococcus lactis subsp. lactis strain LMG 19460. This strain has potential application for a cost-effective production of food-grade plasmid DNA to use in DNA vaccines, produce recombinant proteins, and be used as a mucosal delivery vehicle of therapeutic molecules.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428304/complete-genome-sequence-of-spiroplasma-citri-strain-r8-a2-t-causal-agent-of-stubborn-disease-in-citrus-species
#14
Robert E Davis, Jonathan Shao, Yan Zhao, Gail E Gasparich, Brady J Gaynor, Nicole Donofrio
Spiroplasma citri causes stubborn disease in Citrus spp. and diseases in other plants. Here, we report the nucleotide sequence of the 1,599,709-bp circular chromosome and two plasmids of S. citri strain R8-A2(T) This information will facilitate analyses to understand spiroplasmal pathogenicity and evolutionary adaptations to lifestyles in plants and arthropod hosts.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428303/genome-sequence-of-microbacterium-sp-strain-tpu-3598-a-lumichrome-producer
#15
Kazunori Yamamoto, Yasuhisa Asano
We report here the genome sequence of Microbacterium sp. strain TPU 3598, previously described as a producer of lumichrome. The sequenced genome size is 3,787,270 bp, the average G+C content is 68.39%, and 3,674 protein-coding sequences are predicted.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428302/draft-genome-sequence-of-a-multidrug-resistant-pseudomonas-aeruginosa-strain-isolated-from-a-patient-with-a-urinary-tract-infection-in-khartoum-sudan
#16
Mohamed Hussain, Malik Suliman, Abdalla Ahmed, Hisham Altayb, Elamin Elneima
Pseudomonas aeruginosa infection is difficult to treat due to the presence of antibiotic resistance determinants. Here, we report the genome sequence of a multidrug-resistant P. aeruginosa strain isolated from a patient with a urinary tract infection in 2015.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428301/whole-genome-sequence-of-corynebacterium-pseudotuberculosis-pa04-isolated-from-the-lymph-node-of-a-sheep-in-the-amazon-brazil
#17
Wana L O Costa, Jorianne T C Alves, Larissa M Dias, Carlos Leonardo de Aragão Araújo, Eziquiel Morais, André G M Silva, Soraya S Andrade, Rommel T J Ramos, Artur Silva, Adriana R C Folador
This study reports the complete genome sequence of Corynebacterium pseudotuberculosis strain PA04, isolated from a sheep in the Amazon, Brazil. This bacterium is the etiological agent of caseous lymphadenitis. This genome contains 2,338,093 bp, 52.2% G+C content, and a total of 2,104 coding sequences (CDSs), 41 pseudogenes, 12 rRNAs, and 49 tRNAs.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428300/draft-genome-sequence-of-enterococcus-casseliflavus-pavet15-obtained-from-the-oviduct-infection-of-the-cattle-tick-rhipicephalus-microplus-in-jiutepec-morelos-mexico
#18
R Cossío-Bayúgar, E Miranda-Miranda, C A Arreguín-Pérez, L Lozano, D Peréz de la Rosa, M K Rocha-Martínez, M A Bravo-Díaz, B Sachman-Ruiz
Enterococcus spp. are Gram-positive lactic acid-producing bacteria found in the intestinal tracts of animals, like mammals, birds, and arthropods. Enterococcus spp. may cause oportunistic infections in vertebrate and invertebrate hosts. We report here the draft genome sequence of Enterococcus casseliflavus PAVET15 containing 3,722,480 bp, with 80 contigs, an N50 of 179,476 bp, and 41.93% G+C content.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428299/draft-genome-sequence-of-tritrichomonas-foetus-strain-k
#19
Marlene Benchimol, Luiz G P de Almeida, Ana Tereza Vasconcelos, Ivone de Andrade Rosa, Maurício Reis Bogo, Luiza Wilges Kist, Wanderley de Souza
The protist Tritrichomonas foetus (Excavata, Parabasalia) is a parasite that causes bovine and feline trichomonosis. Bovine trichomonosis is a venereal disease that leads to abortion and reproductive problems in herds. Feline trichomonosis affects domestic cats. Here, we report the genome sequence of the T. foetus K strain, isolated in Brazil.
April 20, 2017: Genome Announcements
https://www.readbyqxmd.com/read/28428298/genome-sequence-of-staphylococcus-saprophyticus-dpc5671-a-strain-isolated-from-cheddar-cheese
#20
Andrea S Bertuzzi, Caitriona M Guinane, Fiona Crispie, Kieran N Kilcawley, Paul L H McSweeney, Mary C Rea
The draft genome sequence of Staphylococcus saprophyticus DPC5671, isolated from cheddar cheese, was determined. S. saprophyticus is a common Gram-positive bacterium detected on the surface of smear-ripened cheese and other fermented foods.
April 20, 2017: Genome Announcements
journal
journal
47543
1
2
Fetch more papers »
Fetching more papers... Fetching...
Read by QxMD. Sign in or create an account to discover new knowledge that matter to you.
Remove bar
Read by QxMD icon Read
×

Search Tips

Use Boolean operators: AND/OR

diabetic AND foot
diabetes OR diabetic

Exclude a word using the 'minus' sign

Virchow -triad

Use Parentheses

water AND (cup OR glass)

Add an asterisk (*) at end of a word to include word stems

Neuro* will search for Neurology, Neuroscientist, Neurological, and so on

Use quotes to search for an exact phrase

"primary prevention of cancer"
(heart or cardiac or cardio*) AND arrest -"American Heart Association"