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Geobiology

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https://www.readbyqxmd.com/read/29656514/microbial-diversity-and-biomarker-analysis-of-modern-freshwater-microbialites-from-laguna-bacalar-mexico
#1
D B Johnson, P A Beddows, T M Flynn, M R Osburn
Laguna Bacalar is a sulfate-rich freshwater lake on the Yucatan Peninsula that hosts large microbialites. High sulfate concentrations distinguish Laguna Bacalar from other freshwater microbialite sites such as Pavilion Lake and Alchichica, Mexico, as well as from other aqueous features on the Yucatan Peninsula. While cyanobacterial populations have been described here previously, this study offers a more complete characterization of the microbial populations and corresponding biogeochemical cycling using a three-pronged geobiological approach of microscopy, high-throughput DNA sequencing, and lipid biomarker analyses...
April 15, 2018: Geobiology
https://www.readbyqxmd.com/read/29577577/pigment-carbon-and-nitrogen-isotopic-signatures-in-euxinic-basins
#2
J M Fulton, M A Arthur, B Thomas, K H Freeman
The carbon and nitrogen isotopic signatures of chloropigments and porphyrins from the sediments of redox-stratified lakes and marine basins reveal details of past biogeochemical nutrient cycling. Such interpretations are strengthened by modern calibration studies, and here, we report on the C and N isotopic composition of pigments and nutrients in the water column and surface sediment of redox-stratified Fayetteville Green Lake (FGL; New York). We also report δ13 C and δ15 N values for pyropheophytin a (Pphe a) and bacteriochlorophyll e (Bchl e) deposited in the Black Sea during its transition to a redox-stratified basin ca...
March 25, 2018: Geobiology
https://www.readbyqxmd.com/read/29577559/tracing-the-fate-of-steroids-through-a-hypersaline-microbial-mat-kiritimati-kiribati-central-pacific
#3
Y Shen, V Thiel, J-P Duda, J Reitner
Eukaryotic steranes are typically absent or occur in very low concentrations in Precambrian sedimentary rocks. However, it is as yet unclear whether this may reflect low source inputs or a preservational bias. For instance, it has been proposed that eukaryotic lipids were profoundly degraded in benthic microbial mats that were ubiquitous prior to the advent of vertical bioturbation in the Cambrian ("mat-seal effect"). It is therefore important to test the microbial turnover and degradation of eukaryotic steroids in real-world microbial mats...
March 25, 2018: Geobiology
https://www.readbyqxmd.com/read/29577549/what-the-1-4-ga-xiamaling-formation-can-and-cannot-tell-us-about-the-mid-proterozoic-ocean
#4
C W Diamond, N J Planavsky, C Wang, T W Lyons
Despite a surge of recent work, the evolution of mid-Proterozoic oceanic-atmospheric redox remains heavily debated. Constraining the dynamics of Proterozoic redox evolution is essential to determine the role, if any, that anoxia played in protracting the development of eukaryotic diversity. We present a multiproxy suite of high-resolution geochemical measurements from a drill core capturing the ~1.4 Ga Xiamaling Formation, North China Craton. Specifically, we analyzed major and trace element concentrations, sulfur and molybdenum isotopes, and iron speciation not only to better understand the local redox conditions but also to establish how relevant our data are to understanding the contemporaneous global ocean...
March 25, 2018: Geobiology
https://www.readbyqxmd.com/read/29573198/formation-of-stromatolite-lamina-at-the-interface-of-oxygenic-anoxygenic-photosynthesis
#5
A Pace, R Bourillot, A Bouton, E Vennin, O Braissant, C Dupraz, T Duteil, I Bundeleva, P Patrier, S Galaup, Y Yokoyama, M Franceschi, A Virgone, P T Visscher
In modern stromatolites, mineralization results from a complex interplay between microbial metabolisms, the organic matrix, and environmental parameters. Here, we combined biogeochemical, mineralogical, and microscopic analyses with measurements of metabolic activity to characterize the mineralization processes and products in an emergent (<18 months) hypersaline microbial mat. While the nucleation of Mg silicates is ubiquitous in the mat, the initial formation of a Ca-Mg carbonate lamina depends on (i) the creation of a high-pH interface combined with a major change in properties of the exopolymeric substances at the interface of the oxygenic and anoxygenic photoautotrophic layers and (ii) the synergy between two major players of sulfur cycle, purple sulfur bacteria, and sulfate-reducing bacteria...
March 23, 2018: Geobiology
https://www.readbyqxmd.com/read/29569335/the-taphonomic-fate-of-isorenieratene-in-lower-jurassic-shales-controlled-by-iron
#6
M Reinhardt, J-P Duda, M Blumenberg, C Ostertag-Henning, J Reitner, C Heim, V Thiel
Fossil derivatives of isorenieratene, an accessory pigment in brown-colored green sulfur bacteria, are often used as tracers for photic zone anoxia through Earth's history, but their diagenetic behavior is still incompletely understood. Here, we assess the preservation of isorenieratene derivatives in organic-rich shales (1.5-8.4 wt.% TOC) from two Lower Jurassic anoxic systems (Bächental oil shale, Tyrol, Austria; Posidonia Shale, Baden-Württemberg, Germany). Bitumens and kerogens were investigated using catalytic hydropyrolysis (HyPy), closed-system hydrous pyrolysis (in gold capsules), gas chromatography-mass spectrometry (GC-MS) and gas chromatography combustion isotope ratio-mass spectrometry (GC-C-IRMS)...
March 22, 2018: Geobiology
https://www.readbyqxmd.com/read/29527802/the-dirty-ice-of-the-mcmurdo-ice-shelf-analogues-for-biological-oases-during-the-cryogenian
#7
I Hawes, A D Jungblut, E D Matys, R E Summons
The Cryogenian (~717-636 Ma) is characterized by widespread glaciation and dramatic fluctuations in biogeochemical cycling during the Sturtian and Marinoan glaciations. The Snowball Earth hypothesis posits that during this period, ice-covered oceans of more or less global extent shut down or greatly diminished photosynthesis in the marine realm. However, rather than suffering a catastrophic loss of biodiversity, fossil evidence suggests that major eukaryotic lineages survived and, indeed, the end of the Cryogenian marks the onset of a rapid diversification of eukaryotic life...
March 12, 2018: Geobiology
https://www.readbyqxmd.com/read/29498810/bioturbation-and-directionality-in-earth-s-carbon-isotope-record-across-the-neoproterozoic-cambrian-transition
#8
R A Boyle, T W Dahl, C J Bjerrum, D E Canfield
Mixing of sediments by moving animals becomes apparent in the trace fossil record from about 550 million years ago (Ma), loosely overlapping with the tail end of the extreme carbonate carbon isotope δ13 Ccarbonate fluctuations that qualitatively distinguish the Proterozoic geochemical record from that of the Phanerozoic. These Precambrian-scale fluctuations in δ13 Ccarbonate (PSF-δ13 Ccarbonate ) remain enigmatic, due to their high amplitude and inclusion of global-scale negative δ13 Ccarbonate values, below anything attributable to mantle input...
March 2, 2018: Geobiology
https://www.readbyqxmd.com/read/29485245/a-morphogram-for-silica-witherite-biomorphs-and-its-application-to-microfossil-identification-in-the-early-earth-rock-record
#9
J Rouillard, J-M García-Ruiz, J Gong, M A van Zuilen
Archean hydrothermal environments formed a likely site for the origin and early evolution of life. These are also the settings, however, were complex abiologic structures can form. Low-temperature serpentinization of ultramafic crust can generate alkaline, silica-saturated fluids in which carbonate-silica crystalline aggregates with life-like morphologies can self-assemble. These "biomorphs" could have adsorbed hydrocarbons from Fischer-Tropsch type synthesis processes, leading to metamorphosed structures that resemble carbonaceous microfossils...
February 27, 2018: Geobiology
https://www.readbyqxmd.com/read/29431278/stable-isotope-fractionation-of-strontium-in-coccolithophore-calcite-influence-of-temperature-and-carbonate-chemistry
#10
M N Müller, A Krabbenhöft, H Vollstaedt, F P Brandini, A Eisenhauer
Marine calcifying eukaryotic phytoplankton (coccolithophores) is a major contributor to the pelagic production of CaCO3 and plays an important role in the biogeochemical cycles of C, Ca and other divalent cations present in the crystal structure of calcite. The geochemical signature of coccolithophore calcite is used as palaeoproxy to reconstruct past environmental conditions and to understand the underlying physiological mechanisms (vital effects) and precipitation kinetics. Here, we present the stable Sr isotope fractionation between seawater and calcite (Δ88/86 Sr) of laboratory cultured coccolithophores in individual dependence of temperature and seawater carbonate chemistry...
February 12, 2018: Geobiology
https://www.readbyqxmd.com/read/29384268/dating-phototropic-microbial-lineages-with-reticulate-gene-histories
#11
C Magnabosco, K R Moore, J M Wolfe, G P Fournier
Phototrophic bacteria are among the most biogeochemically significant organisms on Earth and are physiologically related through the use of reaction centers to collect photons for energy metabolism. However, the major phototrophic lineages are not closely related to one another in bacterial phylogeny, and the origins of their respective photosynthetic machinery remain obscured by time and low sequence similarity. To better understand the co-evolution of Cyanobacteria and other ancient anoxygenic phototrophic lineages with respect to geologic time, we designed and implemented a variety of molecular clocks that use horizontal gene transfer (HGT) as additional, relative constraints...
January 31, 2018: Geobiology
https://www.readbyqxmd.com/read/29380943/evidence-of-oxygenic-phototrophy-in-ancient-phosphatic-stromatolites-from-the-paleoproterozoic-vindhyan-and-aravalli-supergroups-india
#12
T Sallstedt, S Bengtson, C Broman, P M Crill, D E Canfield
Fossil microbiotas are rare in the early rock record, limiting the type of ecological information extractable from ancient microbialites. In the absence of body fossils, emphasis may instead be given to microbially derived features, such as microbialite growth patterns, microbial mat morphologies, and the presence of fossilized gas bubbles in lithified mats. The metabolic affinity of micro-organisms associated with phosphatization may reveal important clues to the nature and accretion of apatite-rich microbialites...
January 30, 2018: Geobiology
https://www.readbyqxmd.com/read/29380506/sulfur-isotope-s-signal-of-nanopyrites-enclosed-in-2-7-ga-stromatolitic-organic-remains-reveal-microbial-sulfate-reduction
#13
J Marin-Carbonne, L Remusat, M C Sforna, C Thomazo, P Cartigny, P Philippot
Microbial sulfate reduction (MSR) is thought to have operated very early on Earth and is often invoked to explain the occurrence of sedimentary sulfides in the rock record. Sedimentary sulfides can also form from sulfides produced abiotically during late diagenesis or metamorphism. As both biotic and abiotic processes contribute to the bulk of sedimentary sulfides, tracing back the original microbial signature from the earliest Earth record is challenging. We present in situ sulfur isotope data from nanopyrites occurring in carbonaceous remains lining the domical shape of stromatolite knobs of the 2...
January 30, 2018: Geobiology
https://www.readbyqxmd.com/read/29350453/late-cretaceous-marine-arthropods-relied-on-terrestrial-organic-matter-as-a-food-source-geochemical-evidence-from-the-coon-creek-lagerst%C3%A3-tte-in-the-mississippi-embayment
#14
M B Vrazo, A F Diefendorf, B E Crowley, A D Czaja
The Upper Cretaceous Coon Creek Lagerstätte of Tennessee, USA, is known for its extremely well-preserved mollusks and decapod crustaceans. However, the depositional environment of this unit, particularly its distance to the shoreline, has long been equivocal. To better constrain the coastal proximity of the Coon Creek Formation, we carried out a multiproxy geochemical analysis of fossil decapod (crab, mud shrimp) cuticle and associated sediment from the type section. Elemental analysis and Raman spectroscopy confirmed the presence of kerogenized carbon in the crabs and mud shrimp; carbon isotope (δ13 C) analysis of bulk decapod cuticle yielded similar mean δ13 C values for both taxa (-25...
March 2018: Geobiology
https://www.readbyqxmd.com/read/29350440/abrupt-burial-imparts-persistent-changes-to-the-bacterial-diversity-of-turbidite-associated-sediment-profiles
#15
B K Harrison, A Myrbo, B E Flood, J V Bailey
The emplacement of subaqueous gravity-driven sediment flows imposes a significant physical and geochemical impact on underlying sediment and microbial communities. Although previous studies have established lasting mineralogical and biological signatures of turbidite deposition, the response of bacteria and archaea within and beneath debris flows remains poorly constrained. Both bacterial cells associated with the underlying sediment and those attached to allochthonous material must respond to substantially altered environmental conditions and selective pressures...
March 2018: Geobiology
https://www.readbyqxmd.com/read/29318763/mineralisation-of-filamentous-cyanobacteria-in-lake-thetis-stromatolites-western-australia
#16
D Wacey, L Urosevic, M Saunders, A D George
Stromatolites are cited as some of the earliest evidence for life on Earth, but problems remain in reconciling the paucity of microfossils in ancient carbonate examples with the abundance of microbes that help construct modern analogues. Here, we trace the mineralisation pathway of filamentous cyanobacteria within stromatolites from Lake Thetis, Western Australia, providing new insights into microfossil preservation in carbonate stromatolites. Lake Thetis cyanobacteria exhibit a spectrum of mineralisation processes that include early precipitation of Mg-silicates, largely controlled by the morphochemical features of the cyanobacteria, followed by aragonite formation that is inferred to be driven by heterotrophic activity...
March 2018: Geobiology
https://www.readbyqxmd.com/read/29243877/multiple-sulfur-isotope-constraints-on-microbial-sulfate-reduction-below-an-archean-seafloor-hydrothermal-system
#17
Shinnosuke Aoyama, Yuichiro Ueno
Microbial sulfate reduction is among the most ubiquitous metabolic processes on earth. The oldest evidence of microbial sulfate reduction appears in the ca. 3.5 Ga Dresser Formation in the North Pole area of Pilbara Craton in Western Australia. That evidence was found through analysis of quadruple sulfur isotopes of sulfate and sulfide minerals deposited on the seafloor. However, the activity of microbial sulfate reduction below the Archean seafloor remains poorly understood. Here, we report the quadruple sulfur isotopic compositions of sulfide minerals within hydrothermally altered seafloor basalt and less altered basaltic komatiite collected from the North Pole Dome area...
March 2018: Geobiology
https://www.readbyqxmd.com/read/29322690/microbially-mediated-aluminosilicate-formation-in-acidic-anaerobic-environments-a-cell-scale-chemical-perspective
#18
J Sánchez-España, K Wang, C Falagán, I Yusta, W D Burgos
Through the use of scanning transmission electron microscopy (STEM) combined with other complementary techniques (SEM, cryo-TEM, HRTEM, and EELS), we have studied the interaction of microorganisms inhabiting deep anoxic waters of acidic pit lakes with dissolved aluminum, silica, sulfate, and ferrous iron. These elements were close to saturation (Al, SiO2 ) or present at very high concentrations (0.12 m Fe(II), 0.12-0.22 m SO4 2- ) in the studied systems. The anaerobic conditions of these environments allowed investigation of geomicrobial interactions that are difficult to see in oxidized, Fe(III)-rich environments...
January 2018: Geobiology
https://www.readbyqxmd.com/read/29130581/oxygen-animals-and-aquatic-bioturbation-an-updated-account
#19
N J Butterfield
No abstract text is available yet for this article.
January 2018: Geobiology
https://www.readbyqxmd.com/read/29105940/the-late-stage-ferruginization-of-the-ediacara-member-rawnsley-quartzite-south-australia-insights-from-uranium-isotopes
#20
L G Tarhan, N J Planavsky, X Wang, E J Bellefroid, M L Droser, J G Gehling
The paleoenvironmental setting in which the Ediacara Biota lived, died, and was preserved in the eponymous Ediacara Member of the Rawnsley Quartzite of South Australia is an issue of long-standing interest and recent debate. Over the past few decades, interpretations have ranged from deep marine to shallow marine to terrestrial. One of the key features invoked by adherents of the terrestrial paleoenvironment hypothesis is the presence of iron oxide coatings, inferred to represent the upper horizons of paleosols, along fossiliferous sandstone beds of the Ediacara Member...
January 2018: Geobiology
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