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Lifetime Data Analysis

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https://www.readbyqxmd.com/read/29214550/the-wally-plot-approach-to-assess-the-calibration-of-clinical-prediction-models
#1
Paul Blanche, Thomas A Gerds, Claus T Ekstrøm
A prediction model is calibrated if, roughly, for any percentage x we can expect that x subjects out of 100 experience the event among all subjects that have a predicted risk of x%. Typically, the calibration assumption is assessed graphically but in practice it is often challenging to judge whether a "disappointing" calibration plot is the consequence of a departure from the calibration assumption, or alternatively just "bad luck" due to sampling variability. We propose a graphical approach which enables the visualization of how much a calibration plot agrees with the calibration assumption to address this issue...
December 6, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/29185212/a-semiparametric-additive-rate-model-for-a-modulated-renewal-process
#2
Xin Chen, Jieli Ding, Liuquan Sun
Recurrent event data from a long single realization are widely encountered in point process applications. Modeling and analyzing such data are different from those for independent and identical short sequences, and the development of statistical methods requires careful consideration of the underlying dependence structure of the long single sequence. In this paper, we propose a semiparametric additive rate model for a modulated renewal process, and develop an estimating equation approach for the model parameters...
November 28, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/29170932/estimating-cross-quantile-residual-ratio-with-left-truncated-semi-competing-risks-data
#3
Jing Yang, Limin Peng
A semi-competing risks setting often arises in biomedical studies, involving both a nonterminal event and a terminal event. Cross quantile residual ratio (Yang and Peng in Biometrics 72:770-779, 2016) offers a flexible and robust perspective to study the dependency between the nonterminal and the terminal events which can shed useful scientific insight. In this paper, we propose a new nonparametric estimator of this dependence measure with left truncated semi-competing risks data. The new estimator overcomes the limitation of the existing estimator that is resulted from demanding a strong assumption on the truncation mechanism...
November 23, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/29098489/investigating-the-correlation-structure-of-quadrivariate-udder-infection-times-through-hierarchical-archimedean-copulas
#4
Leen Prenen, Roel Braekers, Luc Duchateau
The correlation structure imposed on multivariate time to event data is often of a simple nature, such as in the shared frailty model where pairwise correlations between event times in a cluster are all the same. In modeling the infection times of the four udder quarters clustered within the cow, more complex correlation structures are possibly required, and if so, such more complex correlation structures give more insight in the infection process. In this article, we will choose a marginal approach to study more complex correlation structures, therefore leaving the modeling of marginal distributions unaffected by the association parameters...
November 2, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/29080062/joint-model-based-clustering-of-nonlinear-longitudinal-trajectories-and-associated-time-to-event-data-analysis-linked-by-latent-class-membership-with-application-to-aids-clinical-studies
#5
Yangxin Huang, Xiaosun Lu, Jiaqing Chen, Juan Liang, Miriam Zangmeister
Longitudinal and time-to-event data are often observed together. Finite mixture models are currently used to analyze nonlinear heterogeneous longitudinal data, which, by releasing the homogeneity restriction of nonlinear mixed-effects (NLME) models, can cluster individuals into one of the pre-specified classes with class membership probabilities. This clustering may have clinical significance, and be associated with clinically important time-to-event data. This article develops a joint modeling approach to a finite mixture of NLME models for longitudinal data and proportional hazard Cox model for time-to-event data, linked by individual latent class indicators, under a Bayesian framework...
October 27, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/29022153/practical-considerations-when-analyzing-discrete-survival-times-using-the-grouped-relative-risk-model
#6
Rachel MacKay Altman, Andrew Henrey
The grouped relative risk model (GRRM) is a popular semi-parametric model for analyzing discrete survival time data. The maximum likelihood estimators (MLEs) of the regression coefficients in this model are often asymptotically efficient relative to those based on a more restrictive, parametric model. However, in settings with a small number of sampling units, the usual properties of the MLEs are not assured. In this paper, we discuss computational issues that can arise when fitting a GRRM to small samples, and describe conditions under which the MLEs can be ill-behaved...
October 11, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28871363/a-joint-model-of-cancer-incidence-metastasis-and-mortality
#7
Qui Tran, Kelley M Kidwell, Alex Tsodikov
Many diseases, especially cancer, are not static, but rather can be summarized by a series of events or stages (e.g. diagnosis, remission, recurrence, metastasis, death). Most available methods to analyze multi-stage data ignore intermediate events and focus on the terminal event or consider (time to) multiple events as independent. Competing-risk or semi-competing-risk models are often deficient in describing the complex relationship between disease progression events which are driven by a shared progression stochastic process...
September 4, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28864842/a-semiparametric-regression-cure-model-for-doubly-censored-data
#8
Peijie Wang, Xingwei Tong, Jianguo Sun
This paper discusses regression analysis of doubly censored failure time data when there may exist a cured subgroup. By doubly censored data, we mean that the failure time of interest denotes the elapsed time between two related events and the observations on both event times can suffer censoring (Sun in The statistical analysis of interval-censored failure time data. Springer, New York, 2006). One typical example of such data is given by an acquired immune deficiency syndrome cohort study. Although many methods have been developed for their analysis (De Gruttola and Lagakos in Biometrics 45:1-12, 1989; Sun et al...
September 1, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28856493/joint-modeling-of-survival-time-and-longitudinal-outcomes-with-flexible-random-effects
#9
Jaeun Choi, Donglin Zeng, Andrew F Olshan, Jianwen Cai
Joint models with shared Gaussian random effects have been conventionally used in analysis of longitudinal outcome and survival endpoint in biomedical or public health research. However, misspecifying the normality assumption of random effects can lead to serious bias in parameter estimation and future prediction. In this paper, we study joint models of general longitudinal outcomes and survival endpoint but allow the underlying distribution of shared random effect to be completely unknown. For inference, we propose to use a mixture of Gaussian distributions as an approximation to this unknown distribution and adopt an Expectation-Maximization (EM) algorithm for computation...
August 30, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28849359/two-sample-tests-for-survival-data-from-observational-studies
#10
Chenxi Li
When observational data are used to compare treatment-specific survivals, regular two-sample tests, such as the log-rank test, need to be adjusted for the imbalance between treatments with respect to baseline covariate distributions. Besides, the standard assumption that survival time and censoring time are conditionally independent given the treatment, required for the regular two-sample tests, may not be realistic in observational studies. Moreover, treatment-specific hazards are often non-proportional, resulting in small power for the log-rank test...
August 28, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28819787/flexible-semi-parametric-regression-of-state-occupational-probabilities-in-a-multistate-model-with-right-censored-data
#11
Chathura Siriwardhana, K B Kulasekera, Somnath Datta
Inference for the state occupation probabilities, given a set of baseline covariates, is an important problem in survival analysis and time to event multistate data. We introduce an inverse censoring probability re-weighted semi-parametric single index model based approach to estimate conditional state occupation probabilities of a given individual in a multistate model under right-censoring. Besides obtaining a temporal regression function, we also test the potential time varying effect of a baseline covariate on future state occupation...
August 17, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28785915/alternating-event-processes-during-lifetimes-population-dynamics-and-statistical-inference
#12
Russell T Shinohara, Yifei Sun, Mei-Cheng Wang
In the literature studying recurrent event data, a large amount of work has been focused on univariate recurrent event processes where the occurrence of each event is treated as a single point in time. There are many applications, however, in which univariate recurrent events are insufficient to characterize the feature of the process because patients experience nontrivial durations associated with each event. This results in an alternating event process where the disease status of a patient alternates between exacerbations and remissions...
August 7, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28779228/group-and-within-group-variable-selection-for-competing-risks-data
#13
Kwang Woo Ahn, Anjishnu Banerjee, Natasha Sahr, Soyoung Kim
Variable selection in the presence of grouped variables is troublesome for competing risks data: while some recent methods deal with group selection only, simultaneous selection of both groups and within-group variables remains largely unexplored. In this context, we propose an adaptive group bridge method, enabling simultaneous selection both within and between groups, for competing risks data. The adaptive group bridge is applicable to independent and clustered data. It also allows the number of variables to diverge as the sample size increases...
August 4, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28779227/the-competing-risks-cox-model-with-auxiliary-case-covariates-under-weaker-missing-at-random-cause-of-failure
#14
Daniel Nevo, Reiko Nishihara, Shuji Ogino, Molin Wang
In the analysis of time-to-event data with multiple causes using a competing risks Cox model, often the cause of failure is unknown for some of the cases. The probability of a missing cause is typically assumed to be independent of the cause given the time of the event and covariates measured before the event occurred. In practice, however, the underlying missing-at-random assumption does not necessarily hold. Motivated by colorectal cancer molecular pathological epidemiology analysis, we develop a method to conduct valid analysis when additional auxiliary variables are available for cases only...
August 4, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28766089/reweighted-estimators-for-additive-hazard-model-with-censoring-indicators-missing-at-random
#15
Xiaolin Chen, Jianwen Cai
Survival data with missing censoring indicators are frequently encountered in biomedical studies. In this paper, we consider statistical inference for this type of data under the additive hazard model. Reweighting methods based on simple and augmented inverse probability are proposed. The asymptotic properties of the proposed estimators are established. Furthermore, we provide a numerical technique for checking adequacy of the fitted model with missing censoring indicators. Our simulation results show that the proposed estimators outperform the simple and augmented inverse probability weighted estimators without reweighting...
August 1, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28755021/a-regularized-variable-selection-procedure-in-additive-hazards-model-with-stratified-case-cohort-design
#16
Ai Ni, Jianwen Cai
Case-cohort designs are commonly used in large epidemiological studies to reduce the cost associated with covariate measurement. In many such studies the number of covariates is very large. An efficient variable selection method is needed for case-cohort studies where the covariates are only observed in a subset of the sample. Current literature on this topic has been focused on the proportional hazards model. However, in many studies the additive hazards model is preferred over the proportional hazards model either because the proportional hazards assumption is violated or the additive hazards model provides more relevent information to the research question...
July 28, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/28733753/modeling-of-semi-competing-risks-by-means-of-first-passage-times-of-a-stochastic-process
#17
Beate Sildnes, Bo Henry Lindqvist
In semi-competing risks one considers a terminal event, such as death of a person, and a non-terminal event, such as disease recurrence. We present a model where the time to the terminal event is the first passage time to a fixed level c in a stochastic process, while the time to the non-terminal event is represented by the first passage time of the same process to a stochastic threshold S, assumed to be independent of the stochastic process. In order to be explicit, we let the stochastic process be a gamma process, but other processes with independent increments may alternatively be used...
July 22, 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/27170333/mark-specific-additive-hazards-regression-with-continuous-marks
#18
Dongxiao Han, Liuquan Sun, Yanqing Sun, Li Qi
For survival data, mark variables are only observed at uncensored failure times, and it is of interest to investigate whether there is any relationship between the failure time and the mark variable. The additive hazards model, focusing on hazard differences rather than hazard ratios, has been widely used in practice. In this article, we propose a mark-specific additive hazards model in which both the regression coefficient functions and the baseline hazard function depend nonparametrically on a continuous mark...
July 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/27118299/semiparametric-partially-linear-varying-coefficient-models-with-panel-count-data
#19
Xin He, Xuenan Feng, Xingwei Tong, Xingqiu Zhao
This paper studies semiparametric regression analysis of panel count data, which arise naturally when recurrent events are considered. Such data frequently occur in medical follow-up studies and reliability experiments, for example. To explore the nonlinear interactions between covariates, we propose a class of partially linear models with possibly varying coefficients for the mean function of the counting processes with panel count data. The functional coefficients are estimated by B-spline function approximations...
July 2017: Lifetime Data Analysis
https://www.readbyqxmd.com/read/27037915/estimation-of-average-causal-effect-using-the-restricted-mean-residual-lifetime-as-effect-measure
#20
Zahra Mansourvar, Torben Martinussen
Although mean residual lifetime is often of interest in biomedical studies, restricted mean residual lifetime must be considered in order to accommodate censoring. Differences in the restricted mean residual lifetime can be used as an appropriate quantity for comparing different treatment groups with respect to their survival times. In observational studies where the factor of interest is not randomized, covariate adjustment is needed to take into account imbalances in confounding factors. In this article, we develop an estimator for the average causal treatment difference using the restricted mean residual lifetime as target parameter...
July 2017: Lifetime Data Analysis
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