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Molecular Biotechnology

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https://www.readbyqxmd.com/read/29779127/physiological-and-transcriptomic-analysis-of-a-chronologically-long-lived-saccharomyces-cerevisiae-strain-obtained-by-evolutionary-engineering
#1
Mevlüt Arslan, Can Holyavkin, Halil İbrahim Kısakesen, Alican Topaloğlu, Yusuf Sürmeli, Zeynep Petek Çakar
High-throughput aging studies with yeast as a model organism involve transposon-mutagenesis and yeast knockout collection, which have been pivotal strategies for understanding the complex cellular aging process. In this study, a chronologically long-lived Saccharomyces cerevisiae mutant was successfully obtained by using another high-throughput approach, evolutionary engineering, based on systematic selection in successive batch cultures under gradually increasing levels of caloric restriction. Detailed comparative physiological and transcriptomic analyses of the chronologically long-lived mutant and the reference strain revealed enhanced levels of respiratory metabolism, upregulation of genes related to carbohydrate metabolic processes, glycogen-trehalose pathways, stress response, and repression of protein synthesis-related genes in the long-lived mutant SRM11, already in the absence of caloric restriction...
May 19, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29761314/pcl-based-composite-scaffold-matrices-for-tissue-engineering-applications
#2
REVIEW
Nadeem Siddiqui, Simran Asawa, Bhaskar Birru, Ramaraju Baadhe, Sreenivasa Rao
Biomaterial-based scaffolds are important cues in tissue engineering (TE) applications. Recent advances in TE have led to the development of suitable scaffold architecture for various tissue defects. In this narrative review on polycaprolactone (PCL), we have discussed in detail about the synthesis of PCL, various properties and most recent advances of using PCL and PCL blended with either natural or synthetic polymers and ceramic materials for TE applications. Further, various forms of PCL scaffolds such as porous, films and fibrous have been discussed along with the stem cells and their sources employed in various tissue repair strategies...
May 14, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29730712/homing-genes-expression-in-fucosyltransferase-vi-treated-umbilical-cord-blood-cd133-cells-which-expanded-on-protein-coated-nanoscaffolds
#3
Amir Atashi, Maryam Islami, Yousef Mortazavi, Masoud Soleimani
Umbilical cord blood (UCB)-derived hematopoietic stem cells (HSCs) are considered because of their self-renewing, differentiating, proliferating, and readily available properties. Moreover, HSCs' homing to the hematopoietic microenvironment is an important step in their transplantation process. But low content of progenitor cells in one unit of UCB and defect in the bone marrow (BM) homing limit their applications. Hence, we decided to correct this deficiency with ex vivo incubation of CD133+ cells using fucosyltransferase VI and GDP-fucose...
May 5, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29704159/diversity-of-immunoglobulin-ig-isotypes-and-the-role-of-activation-induced-cytidine-deaminase-aid-in-fish
#4
REVIEW
Bhakti Patel, Rajanya Banerjee, Mrinal Samanta, Surajit Das
The disparate diversity in immunoglobulin (Ig) repertoire has been a subject of fascination since the emergence of prototypic adaptive immune system in vertebrates. The carboxy terminus region of activation-induced cytidine deaminase (AID) has been well established in tetrapod lineage and is crucial for its function in class switch recombination (CSR) event of Ig diversification. The absence of CSR in the paraphyletic group of fish is probably due to changes in catalytic domain of AID and lack of cis-elements in IgH locus...
April 27, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29704158/production-of-n-acetyl-d-neuraminic-acid-by-recombinant-single-whole-cells-co-expressing-n-acetyl-d-glucosamine-2-epimerase-and-n-acetyl-d-neuraminic-acid-aldolase
#5
Chao-Hung Kao, Yih-Yuan Chen, Lian-Ren Wang, Yen-Chung Lee
N-acetyl-D-neuraminic acid (Neu5Ac) is a costly precursor for many drugs such as anti-influenza antivirals. In a previous study, a whole-cell process for Neu5Ac production was developed using a combination of two Escherichia coli cells expressing Anabaena sp. CH1 N-acetyl-D-glucosamine-2-epimerase (bage) and E. coli N-acetyl-D-neuraminic acid aldolase (nanA), respectively. In this study, we constructed a bAGE and NanA co-expression system to improve Neu5Ac production. Two recombinant E. coli strains, E. coli BL21 (DE3) pET-bage-nanA (HA) and E...
April 27, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29687371/metabolic-engineering-of-glycyrrhizin-pathway-by-over-expression-of-beta-amyrin-11-oxidase-in-transgenic-roots-of-glycyrrhiza-glabra
#6
Zahra Shirazi, Ali Aalami, Masoud Tohidfar, Mohammad Mehdi Sohani
Glycyrrhiza glabra is one of the most important and well-known medicinal plants which produces various triterpene saponins such as glycyrrhizin. Beta-amyrin 11-oxidase (CYP88D6) plays a key role in engineering pathway of glycyrrhizin production and converts an intermediated beta-amyrin compound to glycyrrhizin. In this study, pBI121GUS-9 :CYP88D6 construct was transferred to G. glabra using Agrobacterium rhizogene ATCC 15834. The quantitation of transgene was measured in putative transgenic hairy roots using qRT-PCR...
April 23, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29654471/haloquadratum-walsbyi-yields-a-versatile-nad-nadp-dual-affinity-thermostable-alcohol-dehydrogenase-hwadh
#7
Jennifer Cassidy, Francesca Paradisi
This study presents the first example of an alcohol dehydrogenase (ADH) from the halophilic archaeum Haloquadratum walsbyi (HwADH). A hexahistidine-tagged recombinant HwADH was heterologously overexpressed in Haloferax volcanii. HwADH was purified in one step and was found to be thermophilic with optimal activity at 65 °C. HwADH was active in the presence of 10% (v/v) organic solvent. The enzyme displayed dual cofactor specificity and a broad substrate scope, and maximum activity was detected with benzyl alcohol and 2-phenyl-1-propanol...
April 13, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29616400/stable-expression-of-adalimumab-in-nicotiana-tabacum
#8
Tzvi Zvirin, Lena Magrisso, Amit Yaari, Oded Shoseyov
Production of monoclonal antibodies and pharmaceutical proteins in transgenic plants has been the focus of many research efforts for close to 30 years. Use of plants as bioreactors reduces large-scale production costs and minimizes risk for human pathogens contamination. Stable nuclear transformation of the plant genome offers a clear advantage in agricultural protein production platforms, limited only by the number of hectares that can be cultivated. We report here, for the first time, successful and stable expression of adalimumab in transgenic Nicotiana tabacum plants...
April 3, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29611116/the-methods-and-mechanisms-to-differentiate-endothelial-like-cells-and-smooth-muscle-cells-from-mesenchymal-stem-cells-for-vascularization-in-vaginal-reconstruction
#9
Hua Zhang, Jingkun Zhang, Xianghua Huang, Yanan Li
Endothelial cells and smooth muscle cells (SMCs) are important aspects of vascularization in vaginal reconstruction. Research has confirmed that mesenchymal stem cells could differentiate into endothelial-like cells and SMCs. But the methods were more complicated and the mechanism was unknown. In the current study, we induced the bone mesenchymal stem cells (BMSCs) to differentiate into endothelial-like cells and SMCs in vitro by differentiation medium and investigated the effect of Wnt/β-catenin signaling on the differentiation process of BMSCs...
April 2, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29605840/targeted-gene-deletion-in-cordyceps-militaris-using-the-split-marker-approach
#10
HaiWei Lou, ZhiWei Ye, Fan Yun, JunFang Lin, LiQiong Guo, BaiXiong Chen, ZhiXian Mu
The macrofungus Cordyceps militaris contains many kinds of bioactive ingredients that are regulated by functional genes, but the functions of many genes in C. militaris are still unknown. In this study, to improve the frequency of homologous integration, a genetic transformation system based on a split-marker approach was developed for the first time in C. militaris to knock out a gene encoding a terpenoid synthase (Tns). The linear and split-marker deletion cassettes were constructed and introduced into C...
March 31, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29600316/optimization-of-a-bioluminescence-resonance-energy-transfer-based-assay-for-screening-of-trypanosoma-cruzi-protein-protein-interaction-inhibitors
#11
Jesica G Mild, Lucia R Fernandez, Odile Gayet, Juan Iovanna, Nelson Dusetti, Martin M Edreira
Chagas disease, a parasitic disease caused by Trypanosoma cruzi, is a major public health burden in poor rural populations of Central and South America and a serious emerging threat outside the endemic region, since the number of infections in non-endemic countries continues to rise. In order to develop more efficient anti-trypanosomal treatments to replace the outdated therapies, new molecular targets need to be explored and new drugs discovered. Trypanosoma cruzi has distinctive structural and functional characteristics with respect to the human host...
March 29, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29594986/efficient-expression-of-an-alzheimer-s-disease-vaccine-candidate-in-the-microalga-schizochytrium-sp-using-the-algevir-system
#12
Benita Ortega-Berlanga, Bernardo Bañuelos-Hernández, Sergio Rosales-Mendoza
Alzheimer's disease (AD) is the most common neurodegenerative disease, where β-amyloid (Aβ) plays a key role in forming conglomerated senile plaques. The receptor of advanced glycation end products (RAGE) is considered a therapeutic target since it transports Aβ into the central nervous system, favoring the pathology progression. Due to the lack of effective therapies for AD, several therapeutic approaches are under development, being vaccines considered a promising alternative. Herein, the use of the Algevir system was explored to produce in the Schizochytrium sp...
March 28, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29574592/ectopic-expression-of-rice-pyl3-enhances-cold-and-drought-tolerance-in-arabidopsis-thaliana
#13
Sangram K Lenka, Senthilkumar K Muthusamy, Viswanathan Chinnusamy, Kailash C Bansal
Abscisic acid (ABA) plays an important role in plant development and adaptation to abiotic stresses. The pyrabactin resistance-like (PYL) gene family has been characterized as intracellular ABA receptors in Arabidopsis. We describe here the functional characterization of PYL3 ABA receptor from a drought-tolerant rice landrace Nagina 22 (N22). The induced expression level of the PYL3 transcript was observed in the N22 under different stress treatments, including cold, drought, high temperature, salt and ABA...
March 24, 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29524201/a-dominant-negative-antisense-approach-targeting-%C3%AE-catenin
#14
Matthias Vonbrüll, Elisabeth Riegel, Christian Halter, Michaela Aigner, Holger Bock, Birgit Werner, Thomas Lindhorst, Thomas Czerny
There have been many attempts to unveil the therapeutic potential of antisense molecules during the last decade. Due to its specific role in canonical Wnt signalling, β-catenin is a potential target for an antisense-based antitumour therapy. In order to establish such a strategy with peptide nucleic acids, we developed a reporter assay for quantification of antisense effects. The luciferase-based assay detects splice blocking with high sensitivity. Using this assay, we show that the splice donor of exon 13 of β-catenin is particularly suitable for an antisense strategy, as it results in a truncated protein which lacks transactivating functions...
May 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29516417/genome-editing-in-stem-cells-for-disease-therapeutics
#15
REVIEW
Minjung Song, Suresh Ramakrishna
Programmable nucleases including zinc finger nucleases, transcription activator-like effector nucleases, and clustered regularly interspaced short palindrome repeats (CRISPR)/CRISPR-associated protein have tremendous potential biological and therapeutic applications as novel genome editing tools. These nucleases enable precise modification of the gene of interest by disruption, insertion, or correction. The application of genome editing technology to pluripotent stem cells or hematopoietic stem cells has the potential to remarkably advance the contribution of this technology to life sciences...
April 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29511941/the-modification-of-cell-wall-properties-by-expression-of-recombinant-resilin-in-transgenic-plants
#16
Itan Preis, Miron Abramson, Oded Shoseyov
Plant tissue is composed of many different types of cells. Plant cells required to withstand mechanical pressure, such as vessel elements and fibers, have a secondary cell wall consisting of polysaccharides and lignin, which strengthen the cell wall structure and stabilize the cell shape. Previous attempts to alter the properties of the cell wall have mainly focused on reducing the amount of lignin or altering its structure in order to ease its extraction from raw woody materials for the pulp and paper and biorefinery industries...
April 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29502205/heterologous-expression-purification-and-characterization-of-an-oligopeptidase-a-from-the-pathogen-leptospira-interrogans
#17
Prasannan V Anu, Madathiparambil G Madanan, Ananthakrishnan J Nair, Gangaprasad A Nair, Govinda Pillai M Nair, Perumana R Sudhakaran, Padikara K Satheeshkumar
Oligopeptidases are enzymes involved in the degradation of short peptides (generally less than 30 amino acids in size) which help pathogens evade the host defence mechanisms. Leptospira is a zoonotic pathogen and causes leptospirosis in mammals. Proteome analysis of Leptospira revealed the presence of oligopeptidase A (OpdA) among other membrane proteins. To study the role of oligopeptidase in leptospirosis, the OpdA of L. interrogans was cloned and expressed in Escherichia coli with a histidine tag (His-tag)...
April 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29492788/characterization-of-an-insecticidal-protein-from-withania-somnifera-against-lepidopteran-and-hemipteran-pest
#18
Blessan Santhosh George, S Silambarasan, K Senthil, John Prasanth Jacob, Modhumita Ghosh Dasgupta
Lectins are carbohydrate-binding proteins with wide array of functions including plant defense against pathogens and insect pests. In the present study, a putative mannose-binding lectin (WsMBP1) of 1124 bp was isolated from leaves of Withania somnifera. The gene was expressed in E. coli, and the recombinant WsMBP1 with a predicted molecular weight of 31 kDa was tested for its insecticidal properties against Hyblaea puera (Lepidoptera: Hyblaeidae) and Probergrothius sanguinolens (Hemiptera: Pyrrhocoridae)...
April 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29488128/the-role-of-calcium-in-differentiation-of-human-adipose-derived-stem-cells-to-adipocytes
#19
Farjam Goudarzi, Adel Mohammadalipour, Iraj Khodadadi, Sheno Karimi, Rezvan Mostoli, Majid Bahabadi, Mohammad Taghi Goodarzi
Differentiation process of mesenchymal stem cells (MSCs) into adipocyte is involved in obesity. Multiple factors such as Ca2+ play important roles in different stages of this process. Because of the complicated roles of Ca2+ in adipogenesis, the aim of present investigation was to study the influx and efflux of Ca2+ into and out of the cells during adipogenesis. Adipose-derived MSCs were used to differentiate into adipocytes. MSCs were exposed to 2.5 mM Ca2+ or 1.8 mM Ca2+ plus calcium ionophore, A23187, for 3 days...
April 2018: Molecular Biotechnology
https://www.readbyqxmd.com/read/29488127/combined-strategies-to-improve-the-expression-of-recombinant-sterol-c24-methyltransferase-from-leishmania-braziliensis-in-e-coli
#20
Humberto F Freitas, Acássia Benjamim Leal Pires, Marcelo S Castilho
Among the neglected tropical diseases, leishmaniasis stands out for its worldwide distribution and diversity of symptoms. Cutaneous leishmaniasis (CL), for instance, is endemic in 18 countries, but the available drugs to fight it have high toxicity and low patient adherence. In order to overcome this, dilemma drugs that target enzymes which are absent in the human host, such as Leishmania braziliensis sterol C24-methyltransferase (SMT-C24, EC 2.1.1.41), are needed. However, medicinal chemistry efforts toward this goal have been hampered by the low yield of soluble recombinant SMT-C24 afforded by currently available expression systems...
April 2018: Molecular Biotechnology
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