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Statistical Methods in Medical Research

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https://www.readbyqxmd.com/read/29336225/a-robust-likelihood-approach-to-inference-about-the-kappa-coefficient-for-correlated-binary-data
#1
Tsung-Shan Tsou
We construct a legitimate likelihood function for the agreement kappa coefficient for correlated data without specifically modelling all levels of correlation. This makes available the likelihood ratio test, the score test and other tools without the knowledge of the underlying distributions. This parametric robust likelihood approach applies to general clustered data scenarios. We provide simulations and real data analysis to demonstrate the advantage of the robust procedure.
January 1, 2018: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29336210/semi-supervised-identification-of-cancer-subgroups-using-survival-outcomes-and-overlapping-grouping-information
#2
Wei Wei, Zequn Sun, Willian A da Silveira, Zhenning Yu, Andrew Lawson, Gary Hardiman, Linda E Kelemen, Dongjun Chung
Identification of cancer patient subgroups using high throughput genomic data is of critical importance to clinicians and scientists because it can offer opportunities for more personalized treatment and overlapping treatments of cancers. In spite of tremendous efforts, this problem still remains challenging because of low reproducibility and instability of identified cancer subgroups and molecular features. In order to address this challenge, we developed Integrative Genomics Robust iDentification of cancer subgroups (InGRiD), a statistical approach that integrates information from biological pathway databases with high-throughput genomic data to improve the robustness for identification and interpretation of molecularly-defined subgroups of cancer patients...
January 1, 2018: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29334860/a-mixed-effects-spatially-varying-coefficients-model-with-application-to-multi-resolution-functional-magnetic-resonance-imaging-data
#3
Zhuqing Liu, Andreas J Bartsch, Veronica J Berrocal, Timothy D Johnson
Spatial resolution plays an important role in functional magnetic resonance imaging studies as the signal-to-noise ratio increases linearly with voxel volume. In scientific studies, where functional magnetic resonance imaging is widely used, the standard spatial resolution typically used is relatively low which ensures a relatively high signal-to-noise ratio. However, for pre-surgical functional magnetic resonance imaging analysis, where spatial accuracy is paramount, high-resolution functional magnetic resonance imaging may play an important role with its greater spatial resolution...
January 1, 2018: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29334859/bayesian-analysis-of-semi-parametric-cox-models-with-latent-variables
#4
Jingheng Cai, Chenyi Liang
Respiratory cancer is one of the most commonly diagnosed cancers as well as the leading cause of cancer death. Numerous efforts have been devoted to reducing the death rate of respiratory cancer. In this article, we propose a semi-parametric Cox model with latent variables to assess the effects of observed and latent risk factors on survival time of respiratory cancer. The characteristics of latent risk factors are characterized via multiple observed indicators by a confirmatory factor analysis model. We develop a Bayesian estimation procedure to obtain the estimates of parameters...
January 1, 2018: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29316853/a-nonparametric-method-for-assessment-of-interactions-in-a-median-regression-model-for-analyzing-right-censored-data
#5
MinJae Lee, Mohammad H Rahbar, Hooshang Talebi
We propose a nonparametric test for interactions when we are concerned with investigation of the simultaneous effects of two or more factors in a median regression model with right censored survival data. Our approach is developed to detect interaction in special situations, when the covariates have a finite number of levels with a limited number of observations in each level, and it allows varying levels of variance and censorship at different levels of the covariates. Through simulation studies, we compare the power of detecting an interaction between the study group variable and a covariate using our proposed procedure with that of the Cox Proportional Hazard (PH) model and censored quantile regression model...
January 1, 2018: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29325514/editor-s-note
#6
(no author information available yet)
No abstract text is available yet for this article.
January 2018: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29251254/direct-and-flexible-marginal-inference-for-semicontinuous-data-response
#7
Mulugeta Gebregziabher, Delia Voronca
No abstract text is available yet for this article.
December 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29251253/permutations-of-functional-magnetic-resonance-imaging-classification-may-not-be-normally-distributed
#8
Mohammed S Al-Rawi, Adelaide Freitas, João V Duarte, Joao P Cunha, Miguel Castelo-Branco
A fundamental question that often occurs in statistical tests is the normality of distributions. Countless distributions exist in science and life, but one distribution that is obtained via permutations, usually referred to as permutation distribution, is interesting. Although a permutation distribution should behave in accord with the central limit theorem, if both the independence condition and the identical distribution condition are fulfilled, no studies have corroborated this concurrence in functional magnetic resonance imaging data...
December 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29027890/corrigendum
#9
(no author information available yet)
No abstract text is available yet for this article.
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/29027889/cure-rate-modelling
#10
Narayanaswamy Balakrishnan
No abstract text is available yet for this article.
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/28150523/flexible-modeling-of-the-hazard-rate-and-treatment-effects-in-long-term-survival-studies
#11
Yolanda Hagar, James J Dignam, Vanja Dukic
The effects of predictors on time to failure may be difficult to assess in cancer studies with longer follow-up, as the commonly used assumption of proportionality of hazards holding over an extended period is often questionable. Motivated by a long-term prostate cancer clinical trial, we contrast and compare four powerful methods for estimation of the hazard rate. These four methods allow for varying degrees of smoothness as well as covariates with effects that vary over time. We pay particular attention to an extended multiresolution hazard estimator, which is a flexible, semi-parametric, Bayesian method for joint estimation of predictor effects and the hazard rate...
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/26282889/a-review-of-instrumental-variable-estimators-for-mendelian-randomization
#12
Stephen Burgess, Dylan S Small, Simon G Thompson
Instrumental variable analysis is an approach for obtaining causal inferences on the effect of an exposure (risk factor) on an outcome from observational data. It has gained in popularity over the past decade with the use of genetic variants as instrumental variables, known as Mendelian randomization. An instrumental variable is associated with the exposure, but not associated with any confounder of the exposure-outcome association, nor is there any causal pathway from the instrumental variable to the outcome other than via the exposure...
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/26271918/uncertainty-in-the-bayesian-meta-analysis-of-normally-distributed-surrogate-endpoints
#13
Sylwia Bujkiewicz, John R Thompson, Enti Spata, Keith R Abrams
We investigate the effect of the choice of parameterisation of meta-analytic models and related uncertainty on the validation of surrogate endpoints. Different meta-analytical approaches take into account different levels of uncertainty which may impact on the accuracy of the predictions of treatment effect on the target outcome from the treatment effect on a surrogate endpoint obtained from these models. A range of Bayesian as well as frequentist meta-analytical methods are implemented using illustrative examples in relapsing-remitting multiple sclerosis, where the treatment effect on disability worsening is the primary outcome of interest in healthcare evaluation, while the effect on relapse rate is considered as a potential surrogate to the effect on disability progression, and in gastric cancer, where the disease-free survival has been shown to be a good surrogate endpoint to the overall survival...
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/26265771/unbiased-estimation-for-response-adaptive-clinical-trials
#14
Jack Bowden, Lorenzo Trippa
Bayesian adaptive trials have the defining feature that the probability of randomization to a particular treatment arm can change as information becomes available as to its true worth. However, there is still a general reluctance to implement such designs in many clinical settings. One area of concern is that their frequentist operating characteristics are poor or, at least, poorly understood. We investigate the bias induced in the maximum likelihood estimate of a response probability parameter, p, for binary outcome by the process of adaptive randomization...
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/26220537/bayesian-accelerated-failure-time-model-for-space-time-dependency-in-a-geographically-augmented-survival-model
#15
Georgiana Onicescu, Andrew Lawson, Jiajia Zhang, Mulugeta Gebregziabher, Kristin Wallace, Jan M Eberth
In this paper, we extend the spatially explicit survival model for small area cancer data by allowing dependency between space and time and using accelerated failure time models. Spatial dependency is modeled directly in the definition of the survival, density, and hazard functions. The models are developed in the context of county level aggregated data. Two cases are considered: the first assumes that the spatial and temporal distributions are independent; the second allows for dependency between the spatial and temporal components...
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/26220535/bayesian-hierarchical-models-for-network-meta-analysis-incorporating-nonignorable-missingness
#16
Jing Zhang, Haitao Chu, Hwanhee Hong, Beth A Virnig, Bradley P Carlin
Network meta-analysis expands the scope of a conventional pairwise meta-analysis to simultaneously compare multiple treatments, synthesizing both direct and indirect information and thus strengthening inference. Since most of trials only compare two treatments, a typical data set in a network meta-analysis managed as a trial-by-treatment matrix is extremely sparse, like an incomplete block structure with significant missing data. Zhang et al. proposed an arm-based method accounting for correlations among different treatments within the same trial and assuming that absent arms are missing at random...
October 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/28818033/erratum-assessing-calibration-of-prognostic-risk-scores
#17
(no author information available yet)
No abstract text is available yet for this article.
August 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/28627310/comparing-cluster-level-dynamic-treatment-regimens-using-sequential-multiple-assignment-randomized-trials-regression-estimation-and-sample-size-considerations
#18
Timothy NeCamp, Amy Kilbourne, Daniel Almirall
Cluster-level dynamic treatment regimens can be used to guide sequential treatment decision-making at the cluster level in order to improve outcomes at the individual or patient-level. In a cluster-level dynamic treatment regimen, the treatment is potentially adapted and re-adapted over time based on changes in the cluster that could be impacted by prior intervention, including aggregate measures of the individuals or patients that compose it. Cluster-randomized sequential multiple assignment randomized trials can be used to answer multiple open questions preventing scientists from developing high-quality cluster-level dynamic treatment regimens...
August 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/28482753/dynamic-treatment-regimes-past-present-and-future-a-conversation-with-experts
#19
Eric B Laber, Marie Davidian
We asked three leading researchers in the area of dynamic treatment regimes to share their stories on how they became interested in this topic and their perspectives on the most important opportunities and challenges for the future.
August 2017: Statistical Methods in Medical Research
https://www.readbyqxmd.com/read/26282890/the-impact-of-covariance-misspecification-in-group-based-trajectory-models-for-longitudinal-data-with-non-stationary-covariance-structure
#20
Christopher E Davies, Gary Fv Glonek, Lynne C Giles
One purpose of a longitudinal study is to gain a better understanding of how an outcome of interest changes among a given population over time. In what follows, a trajectory will be taken to mean the series of measurements of the outcome variable for an individual. Group-based trajectory modelling methods seek to identify subgroups of trajectories within a population, such that trajectories that are grouped together are more similar to each other than to trajectories in distinct groups. Group-based trajectory models generally assume a certain structure in the covariances between measurements, for example conditional independence, homogeneous variance between groups or stationary variance over time...
August 2017: Statistical Methods in Medical Research
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