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Plant Molecular Biology

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https://www.readbyqxmd.com/read/29777486/physiological-and-quantitative-proteomic-analyses-unraveling-potassium-deficiency-stress-response-in-alligator-weed-alternanthera-philoxeroides-l-root
#1
Li-Qin Li, Lun Liu, Wei Zhuo, Qian Chen, Sheng Hu, Shuang Peng, Xi-Yao Wang, Yi-Fei Lu, Li-Ming Lu
Physiological and iTRAQ based proteomic analysis provided new insights into potassium deficiency stress response in alligator weed root. Alligator weed (Alternanthera philoxeroides) has a strong ability to adapt to potassium deficiency (LK) stress. Proteomic changes in response to this stress are largely unknown in alligator weed. In this study, we investigated physiological and molecular mechanisms under LK using isobaric tags for relative and absolute quantitation to characterize proteome-level changes in this plant...
May 18, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29777485/co-suppression-of-atmips-demonstrates-cooperation-of-mips1-mips2-and-mips3-in-maintaining-myo-inositol-synthesis
#2
C M Fleet, J Y Yen, E A Hill, G E Gillaspy
Co-suppressed MIPS2 transgenic lines allow bypass of the embryo lethal phenotype of the previously published triple knock-out and demonstrate the effects of MIPS on later stages of development. Regulation of inositol production is of interest broadly for its effects on plant growth and development. The enzyme L-myo-inositol 1-phosphate synthase (MIPS, also known as IPS) isomerizes D-glucose-6-P to D-inositol 3-P, and this is the rate-limiting step in inositol production. In Arabidopsis thaliana, the MIPS enzyme is encoded by three different genes, (AtMIPS1, AtMIPS2 and AtMIPS3), each of which has been shown to produce proteins with biochemically similar properties but differential expression patterns...
May 18, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29761268/towards-a-comprehensive-picture-of-c-to-u-rna-editing-sites-in-angiosperm-mitochondria
#3
Alejandro A Edera, Carolina L Gandini, M Virginia Sanchez-Puerta
Our understanding of the dynamic and evolution of RNA editing in angiosperms is in part limited by the few editing sites identified to date. This study identified 10,217 editing sites from 17 diverse angiosperms. Our analyses confirmed the universality of certain features of RNA editing, and offer new evidence behind the loss of editing sites in angiosperms. RNA editing is a post-transcriptional process that substitutes cytidines (C) for uridines (U) in organellar transcripts of angiosperms. These substitutions mostly take place in mitochondrial messenger RNAs at specific positions called editing sites...
May 14, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29736762/developmental-transcriptome-analysis-of-floral-transition-in-rosa-odorata-var-gigantea
#4
Xuelian Guo, Chao Yu, Le Luo, Huihua Wan, Ni Zhen, Yushu Li, Tangren Cheng, Jia Wang, Huitang Pan, Qixiang Zhang
Expression analyses revealed that floral transition of Rosa odorata var. gigantea is mainly regulated by VRN1, COLs, DELLA and KSN, with contributions by the effects of phytohormone and starch metabolism. Seasonal plants utilize changing environmental and developmental cues to control the transition from vegetative growth to flowering at the correct time of year. This study investigated global gene expression profiles at different developmental stages of Rosa odorata var. gigantea by RNA-sequencing, combined with phenotypic characterization and physiological changes...
May 7, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29713868/a-genome-wide-analysis-of-the-flax-linum-usitatissimum-l-dirigent-protein-family-from-gene-identification-and-evolution-to-differential-regulation
#5
Cyrielle Corbin, Samantha Drouet, Lucija Markulin, Daniel Auguin, Éric Lainé, Laurence B Davin, John R Cort, Norman G Lewis, Christophe Hano
Identification of DIR encoding genes in flax genome. Analysis of phylogeny, gene/protein structures and evolution. Identification of new conserved motifs linked to biochemical functions. Investigation of spatio-temporal gene expression and response to stress. Dirigent proteins (DIRs) were discovered during 8-8' lignan biosynthesis studies, through identification of stereoselective coupling to afford either (+)- or (-)-pinoresinols from E-coniferyl alcohol. DIRs are also involved or potentially involved in terpenoid, allyl/propenyl phenol lignan, pterocarpan and lignin biosynthesis...
April 30, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29700675/talen-mediated-targeted-mutagenesis-of-fatty-acid-desaturase-2-fad2-in-peanut-arachis-hypogaea-l-promotes-the-accumulation-of-oleic-acid
#6
Shijie Wen, Hao Liu, Xingyu Li, Xiaoping Chen, Yanbin Hong, Haifen Li, Qing Lu, Xuanqiang Liang
A first creation of high oleic acid peanut varieties by using transcription activator-like effecter nucleases (TALENs) mediated targeted mutagenesis of Fatty Acid Desaturase 2 (FAD2). Transcription activator like effector nucleases (TALENs), which allow the precise editing of DNA, have already been developed and applied for genome engineering in diverse organisms. However, they are scarcely used in higher plant study and crop improvement, especially in allopolyploid plants. In the present study, we aimed to create targeted mutagenesis by TALENs in peanut...
April 26, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29687284/an-improved-ternary-vector-system-for-agrobacterium-mediated-rapid-maize-transformation
#7
Ajith Anand, Steven H Bass, Emily Wu, Ning Wang, Kevin E McBride, Narayana Annaluru, Michael Miller, Mo Hua, Todd J Jones
A simple and versatile ternary vector system that utilizes improved accessory plasmids for rapid maize transformation is described. This system facilitates high-throughput vector construction and plant transformation. The super binary plasmid pSB1 is a mainstay of maize transformation. However, the large size of the base vector makes it challenging to clone, the process of co-integration is cumbersome and inefficient, and some Agrobacterium strains are known to give rise to spontaneous mutants resistant to tetracycline...
April 23, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29680877/role-of-arabidopsis-abf1-3-4-during-det1-germination-in-salt-and-osmotic-stress-conditions
#8
V C Dilukshi Fernando, Wesam Al Khateeb, Mark F Belmonte, Dana F Schroeder
Arabidopsis det1 mutants exhibit salt and osmotic stress resistant germination. This phenotype requires HY5, ABF1, ABF3, and ABF4. While DE-ETIOLATED 1 (DET1) is well known as a negative regulator of light development, here we describe how det1 mutants also exhibit altered responses to salt and osmotic stress, specifically salt and mannitol resistant germination. LONG HYPOCOTYL 5 (HY5) positively regulates both light and abscisic acid (ABA) signalling. We found that hy5 suppressed the det1 salt and mannitol resistant germination phenotype, thus, det1 stress resistant germination requires HY5...
April 21, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29679263/molecular-identification-of-gapdhs-in-cassava-highlights-the-antagonism-of-megapcs-and-meatg8s-in-plant-disease-resistance-against-cassava-bacterial-blight
#9
Hongqiu Zeng, Yanwei Xie, Guoyin Liu, Daozhe Lin, Chaozu He, Haitao Shi
MeGAPCs were identified as negative regulators of plant disease resistance, and the interaction of MeGAPCs and MeATG8s was highlighted in plant defense response. As an important enzyme of glycolysis metabolic pathway, glyceraldehyde-3-P dehydrogenase (GAPDH) plays important roles in plant development, abiotic stress and immune responses. Cassava (Manihot esculenta) is most important tropical crop and one of the major food crops, however, no information is available about GAPDH gene family in cassava. In this study, 14 MeGAPDHs including 6 cytosol GAPDHs (MeGAPCs) were identified from cassava, and the transcripts of 14 MeGAPDHs in response to Xanthomonas axonopodis pv manihotis (Xam) indicated their possible involvement in immune responses...
April 20, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29675814/the-zinc-finger-transcription-factor-zat6-is-essential-for-hydrogen-peroxide-induction-of-anthocyanin-synthesis-in-arabidopsis
#10
Haitao Shi, Guoyin Liu, Yunxie Wei, Zhulong Chan
The accumulation of flavonoids is activated by various abiotic stresses, and the induction of reactive oxygen species (ROS) especially hydrogen peroxide (H2 O2 ) is a general response to abiotic stress in plants. However, the direct link between flavonoids and H2 O2 and underlying mechanism remain elusive. In this study, we found that the concentrations of anthocyanin and flavonoids were significantly induced by H2 O2 treatment. Furthermore, we found that the transcript level of ZINC FINGER of ARABIDOPSIS THALIANA 6 (ZAT6) was significantly activated after exogenous H2 O2 treatment, and modulation of AtZAT6 expression positively affected the concentrations of both anthocyanin and total flavonoids...
April 19, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29667000/a-novel-mitochondrial-orf147-causes-cytoplasmic-male-sterility-in-pigeonpea-by-modulating-aberrant-anther-dehiscence
#11
Pooja Bhatnagar-Mathur, Ranadheer Gupta, Palakolanu Sudhakar Reddy, Bommineni Pradeep Reddy, Dumbala Srinivas Reddy, C V Sameerkumar, Rachit Kumar Saxena, Kiran K Sharma
A novel open reading frame (ORF) identified and cloned from the A4 cytoplasm of Cajanus cajanifolius induced partial to complete male sterility when introduced into Arabidopsis and tobacco. Pigeonpea (Cajanus cajan L. Millsp.) is the only legume known to have commercial hybrid seed technology based on cytoplasmic male sterility (CMS). We identified a novel ORF (orf147) from the A4 cytoplasm of C. cajanifolius that was created via rearrangements in the CMS line and co-transcribes with the known and unknown sequences...
April 17, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29633168/expression-of-vgrnb-pe-immunotoxin-in-transplastomic-lettuce-lactuca-sativa-l
#12
Malihe Mirzaee, Mokhtar Jalali-Javaran, Ahmad Moieni, Sirous Zeinali, Mahdi Behdani
This research has shown, for the first time, that plant chloroplasts are a suitable compartment for synthesizing recombinant immunotoxins and the transgenic immunotoxin efficiently causes the inhibition of VEGFR2 overexpression, cell growth and proliferation. Angiogenesis refers to the formation of new blood vessels, which resulted in the growth, invasion and metastasis of cancer. The vascular endothelial growth factor receptor 2 (VEGFR2) plays a major role in angiogenesis and blocking of its signaling inhibits neovascularization and tumor metastasis...
April 10, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29633167/proteomic-and-physiological-analyses-reveal-the-role-of-exogenous-spermidine-on-cucumber-roots-in-response-to-ca-no-3-2-stress
#13
Jing Du, Shirong Guo, Jin Sun, Sheng Shu
The mechanism of exogenous Spd-induced Ca(NO3 )2 stress tolerance in cucumber was studied by proteomics and physiological analyses. Protein-protein interaction network revealed 13 key proteins involved in Spd-induced Ca(NO3 )2 stress resistance. Ca(NO3 )2 stress is one of the major reasons for secondary salinization that limits cucumber plant development in greenhouse. The conferred protective role of exogenous Spd on cucumber in response to Ca(NO3 )2 stress cues involves changes at the cellular and physiological levels...
April 9, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29619663/global-gene-regulation-in-tomato-plant-solanum-lycopersicum-responding-to-vector-bactericera-cockerelli-feeding-and-pathogen-candidatus-liberibacter-solanacearum-infection
#14
Ordom Brian Huot, Julien Gad Levy, Cecilia Tamborindeguy
Different responses are elicited in tomato plants by Bactericera cockerelli harboring or not the pathogen 'Candidatus Liberibacter solanacearum'. 'Candidatus Liberibacter solanacearum' (Lso) has emerged as a major pathogen of crops worldwide. This bacterial pathogen is transmitted by Bactericera cockerelli, the tomato psyllid, to solanaceous crops. In this study, the transcriptome profiles of tomato (Solanum lycopersicum) exposed to B. cockerelli infestation and Lso infection were evaluated at 1, 2 and 4 weeks following colonization and/or infection...
April 4, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29616437/tea-plant-sweet-transporters-expression-profiling-sugar-transport-and-the-involvement-of-cssweet16-in-modifying-cold-tolerance-in-arabidopsis
#15
Lu Wang, Lina Yao, Xinyuan Hao, Nana Li, Wenjun Qian, Chuan Yue, Changqing Ding, Jianming Zeng, Yajun Yang, Xinchao Wang
Thirteen SWEET transporters were identified in Camellia sinensis and the cold-suppression gene CsSWEET16 contributed to sugar compartmentation across the vacuole and function in modifying cold tolerance in Arabidopsis. The sugars will eventually be exported transporters (SWEET) family of sugar transporters in plants is a recently identified protein family of sugar uniporters that contain seven transmembrane helices harbouring two MtN3 motifs. SWEETs play important roles in various biological processes, including plant responses to environmental stimuli...
April 3, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29616436/functionally-redundant-lng3-and-lng4-genes-regulate-turgor-driven-polar-cell-elongation-through-activation-of-xth17-and-xth24
#16
Young Koung Lee, Ji Ye Rhee, Seong Hee Lee, Gap Chae Chung, Soon Ju Park, Shoji Segami, Masayohi Maeshima, Giltsu Choi
In this work, we genetically characterized the function of Arabidopsis thaliana, LONGIFOLIA (LNG1), LNG2, LNG3, LNG4, their contribution to regulate vegetative architecture in plant. We used molecular and biophysical approaches to elucidate a gene function that regulates vegetative architecture, as revealed by the leaf phenotype and later effects on flowering patterns in Arabidopsis loss-of-function mutants. As a result, LNG genes play an important role in polar cell elongation by turgor pressure controlling the activation of XTH17 and XTH24...
April 3, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29603041/a-tandem-array-of-udp-glycosyltransferases-from-the-ugt73c-subfamily-glycosylate-sapogenins-forming-a-spectrum-of-mono-and-bisdesmosidic-saponins
#17
Pernille Østerbye Erthmann, Niels Agerbirk, Søren Bak
This study identifies six UGT73Cs all able to glucosylate sapogenins at positions 3 and/or 28 which demonstrates that B. vulgaris has a much richer arsenal of UGTs involved in saponin biosynthesis than initially anticipated. The wild cruciferous plant Barbarea vulgaris is resistant to some insects due to accumulation of two monodesmosidic triterpenoid saponins, oleanolic acid 3-O-β-cellobioside and hederagenin 3-O-β-cellobioside. Insect resistance depends on the structure of the sapogenin aglycone and the glycosylation pattern...
March 30, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29600502/tracking-the-elusive-5-exonuclease-activity-of-chlamydomonas-reinhardtii-rnase-j
#18
Anna Liponska, Ailar Jamalli, Richard Kuras, Loreto Suay, Enrico Garbe, Francis-André Wollman, Soumaya Laalami, Harald Putzer
Chlamydomonas RNase J is the first member of this enzyme family that has endo- but no intrinsic 5' exoribonucleolytic activity. This questions its proposed role in chloroplast mRNA maturation. RNA maturation and stability in the chloroplast are controlled by nuclear-encoded ribonucleases and RNA binding proteins. Notably, mRNA 5' end maturation is thought to be achieved by the combined action of a 5' exoribonuclease and specific pentatricopeptide repeat proteins (PPR) that block the progression of the nuclease...
March 29, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29582247/taeds1-genes-positively-regulate-resistance-to-powdery-mildew-in-wheat
#19
Guiping Chen, Bo Wei, Guoliang Li, Caiyan Gong, Renchun Fan, Xiangqi Zhang
Three EDS1 genes were cloned from common wheat and were demonstrated to positively regulate resistance to powdery mildew in wheat. The EDS1 proteins play important roles in plant basal resistance and TIR-NB-LRR protein-triggered resistance in dicots. Until now, there have been very few studies on EDS1 in monocots, and none in wheat. Here, we report on three common wheat orthologous genes of EDS1 family (TaEDS1-5A, 5B and 5D) and their function in powdery mildew resistance. Comparisons of these genes with their orthologs in diploid ancestors revealed that EDS1 is a conserved gene family in Triticeae...
March 26, 2018: Plant Molecular Biology
https://www.readbyqxmd.com/read/29574557/mirnas-control-ham1-functions-at-the-single-cell-layer-level-and-are-essential-for-normal-embryogenesis-in-arabidopsis
#20
Hideki Takanashi, Hikari Sumiyoshi, Mirai Mogi, Yoshikazu Hayashi, Takayuki Ohnishi, Nobuhiro Tsutsumi
KEY MESSAGE: miR171a controls HAM1 functions within the protodermal cells of the embryo, and these controls are essential for normal embryogenesis in Arabidopsis. Arabidopsis thaliana miR171a is known to bind to and cleave mRNAs of three HAIRY MERISTEM (HAM) genes that encode members of the GRAS family transcriptional regulators. The molecular functions of the HAM genes are still being elucidated in Arabidopsis. However, detailed expression patterns of miR171a and the effects of the failure of miR171a to suppress HAM genes were unknown till now...
March 24, 2018: Plant Molecular Biology
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