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Journal of Basic Microbiology

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https://www.readbyqxmd.com/read/28211948/yield-and-cold-storage-of-trichoderma-conidia-is-influenced-by-substrate-ph-and-storage-temperature
#1
Johanna M Steyaert, Anastasia Chomic, Maria Nieto-Jacobo, Artemio Mendoza-Mendoza, Amanda J Hay, Mark Braithwaite, Alison Stewart
In this study we examined the influence of the ambient pH during morphogenesis on conidial yield of Trichoderma sp. "atroviride B" LU132 and T. hamatum LU593 and storage at low temperatures. The ambient pH of the growth media had a dramatic influence on the level of Trichoderma conidiation and this was dependent on the strain and growth media. On malt-extract agar, LU593 yield decreased with increasing pH (3-6), whereas yield increased with increasing pH for LU132. During solid substrate production the reverse was true for LU132 whereby yield decreased with increasing pH...
February 17, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28211942/antifungal-activity-change-of-streptomyces-rimosus-my02-mediated-by-confront-culture-with-other-microorganism
#2
Jicheng Yu, Qiu Liu, Chao Chen, Xiaohui Qi
Streptomyces rimosus can produce antibacterial and antifungal antibiotics, which have important applications in medicine and agriculture. Seventy-nine microbial strains were employed to assay interaction between S. rimosus MY02 and different fungi, actinomyces, and bacteria when confront cultured on solid media. The results showed that the presence of a microorganism might affect the activity of another one. When S. rimosus MY02 confront cultured with other microorganisms, the inductive effect might be positive or negative...
February 17, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28186324/isolation-and-identification-of-n-butyl-tetrahydro-5-oxofuran-2-carboxamide-produced-by-bacillus-sp-l60-and-its-antifungal-activity
#3
Yong-Seong Lee, Jeong-Yong Cho, Jae-Hak Moon, Kil-Yong Kim
Rhizoctonia solani is the cause of substantial economic loss in many crops. The aim of this study is to investigate biocontrol potential of Bacillus sp. L60 against R. solani and to purify an antifungal compound. In this study, Bacillus sp. L60 demonstrated significant antagonism toward R. solani with the dual culture assay. The antifungal compound was extracted from Bacillus sp. L60 culture supernatant with n-butanol, and identified as N-butyl-tetrahydro-5-oxofuran-2-carboxamide (BT-5O-2C) having molecular weights of 185...
February 10, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28156004/comparative-analysis-of-crispr-cas-systems-in-klebsiella-genomes
#4
Juntao Shen, Li Lv, Xudong Wang, Zhilong Xiu, Guoqiang Chen
Prokaryotic CRISPR-Cas system provides adaptive immunity against invasive genetic elements. Bacteria of the genus Klebsiella are important nosocomial opportunistic pathogens. However, information of CRISPR-Cas system in Klebsiella remains largely unknown. Here, we analyzed the CRISPR-Cas systems of 68 complete genomes of Klebsiella representing four species. All the elements for CRISPR-Cas system (cas genes, repeats, leader sequences, and PAMs) were characterized. Besides the typical Type I-E and I-F CRISPR-Cas systems, a new Subtype I system located in the ABC transport system-glyoxalase region was found...
February 3, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28156000/rhamnolipids-from-pseudomonas-aeruginosa-strain-w10-as-antibiofilm-antibiofouling-products-for-metal-protection
#5
Alif Chebbi, Mohamed Elshikh, Farazul Haque, Syed Ahmed, Sara Dobbin, Roger Marchant, Sami Sayadi, Mohamed Chamkha, Ibrahim M Banat
Industrial biofouling-problems associated with the accumulation of microorganisms from flowing water and fluids on processing surfaces can cause severe problems. A Pseudomonas aeruginosa strain W10 was isolated from industrial setting and found to produce predominantly di-rhamnolipids (Rha-Rha-C10-C10) with a yield of around 10 g L(-1) and a critical micelle concentration (CMC) of 80 mg L(-1) . P. aeruginosa W10 rhamnolipids were able to disrupt up to 99% of 48 h pre-formed biofilms of the Gram-positive organisms Bacillus licheniformis CAN55, Staphylococcus capitis SH6, and a mixed culture (strains CAN55, SH6, and W10), under static conditions, at concentrations of 0...
February 3, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28155998/lipids-of-rhodotorula-mucilaginosa-iipl32-with-biodiesel-potential-oil-yield-fatty-acid-profile-fuel-properties
#6
Mahesh Khot, Debashish Ghosh
This study analyzes the single cell oil (SCO), fatty acid profile, and biodiesel fuel properties of the yeast Rhodotorula mucilaginosa IIPL32 grown on the pentose fraction of acid pre-treated sugarcane bagasse as a carbon source. The yeast biomass from nitrogen limiting culture conditions (15.3 g L(-1) ) was able to give the SCO yield of 0.17 g g(-1) of xylose consumed. Acid digestion, cryo-pulverization, direct in situ transesterification, and microwave assisted techniques were evaluated in comparison to the Soxhlet extraction for the total intracellular yeast lipid recovery...
February 3, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28139058/change-in-mineral-weathering-behaviors-of-a-bacterium-chitinophaga-jiangningensis-jn53-under-different-nutrition-conditions
#7
Cheng Cheng, Qi Wang, Linyan He, Xiafang Sheng
Bacteria play important roles in mineral weathering and soil formation. However, little is known about the nutrition-related changes in mineral weathering potential and pattern of bacteria. In this study, mineral weathering behaviors of a novel mineral-weathering bacterium Chitinophaga jiangningensis JN53 were characterized in the presence of three contrasting biotite or potassium feldspar-added media. C. jiangningensis JN53 increased more Fe release from the minerals in the M-BHm (nutrition-poor medium) than in the SSKM (nutrition-rich medium) and BHm (nutrition-moderate medium), while C...
January 31, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28083961/disruption-of-coma-homolog-in-ralstonia-solanacearum-does-not-impair-its-twitching-motility
#8
Anjan Barman, Chandrika Buragohain, Suvendra Kumar Ray
Ralstonia solanacearum is an important phyto-pathogenic bacterium. The bacterium exhibits type IV pili meditated twitching motility that has been implicated in the process of natural transformation in it. A comA gene homolog, alike in several other naturally competent bacteria, has been already reported in this bacterium. However, there are no report of direct link between comA and twitching motility during the natural transformation process in this pathogen. In order to figure out any connection between comA and twitching motility, we created an insertion mutation in comA gene homolog of R...
January 13, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28060404/diversity-and-composition-of-rhizospheric-soil-and-root-endogenous-bacteria-in-panax-notoginseng-during-continuous-cropping-practices
#9
Yong Tan, Yinshan Cui, Haoyu Li, Anxiu Kuang, Xiaoran Li, Yunlin Wei, Xiuling Ji
Rhizobacteria and endophytic bacteria play important roles in protecting host plants from infection by phytopathogens, which cause soil-borne diseases and severely impair plant health. Panax notoginseng is negatively affected by continuous cropping and becomes vulnerable to attack by microbial pathogens. In the present study, culture-independent Illumina MiSeq was used to investigate root-endophytic and rhizospheric bacteria in response to continuous cropping of P. notoginseng. Numbers of rhizospheric bacteria decreased with continuous P...
January 6, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28054716/arsenic-resistance-genes-of-as-resistant-purple-nonsulfur-bacteria-isolated-from-as-contaminated-sites-for-bioremediation-application
#10
Phitthaya Nookongbut, Duangporn Kantachote, Kannan Krishnan, Mallavarapu Megharaj
This study aimed to identify arsenic resistant mechanisms in As-resistant purple nonsulfur bacteria (PNSB) by screening them for presence of As-resistance genes and related enzymes. Resistance to As(III) and As(V) of four As-resistant PNSB determined in terms of median inhibition concentration (IC50 values) were in the order of strains Rhodopseudomonas palustris C1 > R. palustris AB3 > Rubrivivax benzoatilyticus C31 > R. palustris L28 which corresponded to the presence of As-resistance genes in these bacteria...
January 5, 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27995638/in-vitro-and-in-vivo-studies-of-the-native-isolates-of-nematophagous-fungi-from-china-against-the-larvae-of-trichostrongylides
#11
Bo-Bo Wang, Feng-Hui Wang, Qiang Xu, Kang-Ying Wang, Yu-Jia Xue, Rui Ren, Jia-Qing Zeng, Yang Liu, Hai-Yan Zhang, Hai-Yu Wang, Bin Cai, Kui-Zheng Cai, Xin Cao
To screen potential nematophagous fungi candidates for the biological control of parasitic nematodes in livestock, in vitro and in vivo studies of the native isolates of nematophagous fungi against the larvae of trichostrongylides were conducted. The in vitro predatory activity of 16 native nematophagous fungal isolates on the larvae of trichostrongylides in sheep feces was assessed. In the ten isolates of Duddingtonia flagrans, the reduction percentage for the infective larvae (L3) of Trichostrongylus colubriformis ranged from 57...
December 20, 2016: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27966221/determination-of-the-microbial-community-features-of-haemaphysalis-flava-in-different-developmental-stages-by-high-throughput-sequencing
#12
Deyong Duan, Tianyin Cheng
In this study, we analyzed the in vivo microbial community structure and diversity differences of Haemaphysalis flava (H. flava) in four developmental stages (egg, larva, nymph, and adult) to determine which bacterial genera could be propagated through transovarial transmission and transmitted by transstadial transmission during different developmental stages of H. flava. Paired-end sequencing of the V3 region of the 16S ribosomal DNA (16S rDNA) of H. flava in four developmental stage samples was conducted using the Illumina MiSeq sequencing platform...
December 14, 2016: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27966212/factors-stimulating-riboflavin-produced-by-lactobacillus-plantarum-crl-725-grown-in-a-semi-defined-medium
#13
Marianela Juarez Del Valle, Jonathan Emiliano Laiño, Graciela Savoy de Giori, Jean Guy LeBlanc
Riboflavin (vitamin B2 ) is one of the B-group water-soluble vitamins and is essential for energy metabolism of the cell. The aim of this study was to determine factors that affect riboflavin production by Lactobacillus (L.) plantarum CRL 725 grown in a semi defined medium and evaluate the expression of its rib genes. The factors found to enhance riboflavin production in this medium were incubation at 30 °C, and the addition of specific medium constituents, such as casamino acids (10 g L(-1) ), guanosine (0...
December 14, 2016: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27911010/screening-of-mercury-resistant-and-indole-3-acetic-acid-producing-bacterial-consortium-for-growth-promotion-of-cicer-arietinum-l
#14
Aatif Amin, Zakia Latif
Mercury resistant (Hg(R) ) bacteria were screened from industrial effluents and effluents-polluted rhizosphere soils near to districts Kasur and Sheikhupura, Pakistan. Out of 60 isolates, three bacterial strains, Bacillus sp. AZ-1, Bacillus cereus AZ-2, and Enterobacter cloacae AZ-3 showed Hg-resistance as 20 μg ml(-1) of HgCl2 and indole-3-acetic acid (IAA) production as 8-38 μg ml(-1) . Biochemical and molecular characterization of selected bacteria was confirmed by 16S ribotyping. Mercury resistant genes merA, merB, and merE of mer operon in Bacillus spp...
December 2, 2016: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27902845/cloning-and-heterologous-expression-of-chlorophyll-a-synthase-in-rhodobacter-sphaeroides
#15
Emre M Ipekoğlu, Koray Göçmen, Mehmet T Öz, Muazzez Gürgan, Meral Yücel
Rhodobacter sphaeroides is a purple non-sulfur bacterium which photoheterotrophically produces hydrogen from organic acids under anaerobic conditions. A gene coding for putative chlorophyll a synthase (chlG) from cyanobacterium Prochlorococcus marinus was amplified by nested polymerase chain reaction and cloned into an inducible-expression plasmid which was subsequently transferred to R. sphaeroides for heterologous expression. Induced expression of chlG in R. sphaeroides led to changes in light absorption spectrum within 400-700 nm...
November 30, 2016: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27885690/long-term-straw-returning-affects-nitrospira-like-nitrite-oxidizing-bacterial-community-in-a-rapeseed-rice-rotation-soil
#16
Xuesong Luo, Shun Han, Songsong Lai, Qiaoyun Huang, Wenli Chen
Nitrospira are the most widespread and well known nitrite-oxidizing bacteria (NOB) and putatively key nitrite-oxidizers in acidic ecosystems. Nevertheless, their ecology in agriculture soils has not been well studied. To understand the impact of straw incorporation on soil Nitrospira-like bacterial community, a cloned library analysis of the nitrite oxidoreductase gene-nxrB was performed for a long-term rapeseed-rice rotation system. In this study, most members of the Nitrospira-like NOB in the paddy soils from the Wuxue field experiment station were phylogenetically related with Nitrospira lineages II...
November 25, 2016: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/28165619/modulation-of-fatty-acids-and-hydrocarbons-in-anabaena-7120-and-its-ntca-mutant-under-calcium
#17
Savita Singh, Ekta Verma, Balkrishna Tiwari, Niveshika, Arun Kumar Mishra
Calcium being a signaling molecule and mediator of cell response, we examined the modulation in fatty acid and hydrocarbon profiles of wild type cyanobacterium Anabaena sp. PCC 7120 and its ntcA mutant under the influence of different calcium chloride concentrations (0-10 mM). Dynamic modifications in fatty acid and hydrocarbon profile were evident through GC-FID analysis of extracted lipids. In the wild type, increase in CaCl2 (10 mM) resulted in unsaturation of fatty acids (observed in terms of high MUFA/PUFA ratio) while hydrocarbon production was distinctly high in the mutant strain compared to wild type at all tested concentrations...
February 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27714828/a-propeptide-independent-protease-from-tannerella-sp-6_1_58faa_ct1-displays-trypsin-like-specificity
#18
Qitao Song, Xiaoyue Zhang, Na Li, Jie Shen, Jiansong Cheng
Despite the absence of any homologs of Tannerella forsythia KLIKK proteases in Tannerella sp.6_1_58FAA_CT1, the strain possesses a putative cysteine protease (G9S4N1) closely related to RgpB of Porphyromonas gingivalis. G9S4N1 lacks obvious propeptide that behaves as inhibitor of proteases and was proven to be a propeptide-independent protease. Unlike RgpB, which exclusively cleaves ArgXaa bonds, G9S4N1 exhibits both arginine- and citrulline-specific activities. Mutations of Asp177, a potential P1-Arg binding site, to uncharged or positively charged residues did not alter the substrate specificity of G9S4N1 significantly...
January 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27690325/biotransformation-of-cholesterol-and-16-17-alpha-epoxypregnenolone-by-novel-cladosporium-sp-strain-is547
#19
Cuiping Pang, Yuting Cao, Xiangdong Zhu
Nowadays, there are a few steroid drugs or intermediates that have been obtained via the transformation of microorganisms, and many strains of transformed steroids have not been found yet. Therefore, it is very significant to screen for the strains that have the abilities to transform steroids to produce valuable products. This study has focused on the screen and identification of strains, the structural identification of converted products, and the optimization of transformation conditions, as well as the establishment of transformation systems...
January 2017: Journal of Basic Microbiology
https://www.readbyqxmd.com/read/27643917/insight-into-the-effects-of-different-cropping-systems-on-soil-bacterial-community-and-tobacco-bacterial-wilt-rate
#20
Jiaojiao Niu, Jin Chao, Yunhua Xiao, Wu Chen, Chao Zhang, Xueduan Liu, Zhongwen Rang, Huaqun Yin, Linjian Dai
Rotation is an effective strategy to control crop disease and improve plant health. However, the effects of crop rotation on soil bacterial community composition and structure, and crop health remain unclear. In this study, using 16S rRNA gene sequencing, we explored the soil bacterial communities under four different cropping systems, continuous tobacco cropping (control group), tobacco-maize rotation, tobacco-lily rotation, and tobacco-turnip rotation. Results of detrended correspondence analysis and dissimilarity tests showed that soil bacterial community composition and structure changed significantly among the four groups, such that Acidobacteria and Actinobacteria were more abundant in the maize rotation group (16...
January 2017: Journal of Basic Microbiology
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